diff mbox series

[bug#62428,05/14] gnu: Add r-org-sc-sgd-db.

Message ID 20230324231900.28367-5-madalinionel.patrascu@mdc-berlin.de
State New
Headers show
Series [bug#62428,01/14] gnu: Add r-anota2seq. | expand

Commit Message

Mădălin Ionel Patrașcu March 24, 2023, 11:18 p.m. UTC 
* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): New variable.
---
 gnu/packages/bioconductor.scm | 21 +++++++++++++++++++++
 1 file changed, 21 insertions(+)
diff mbox series

Patch

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3ae0dba919..21aa3476c0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -116,6 +116,27 @@  (define-public r-org-bt-eg-db
 based on mapping using Entrez Gene identifiers.")
     (license license:artistic2.0)))
 
+(define-public r-org-sc-sgd-db
+  (package
+    (name "r-org-sc-sgd-db")
+    (version "3.16.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "org.Sc.sgd.db" version
+                              'annotation))
+       (sha256
+       (base32 "03b8m4p865kzhjj8zyhmc0ic0n4jyjdl4h8a8xny10b7xs6l0v9f"))))
+    (properties `((upstream-name . "org.Sc.sgd.db")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-annotationdbi))
+    (home-page "https://bioconductor.org/packages/org.Sc.sgd.db")
+    (synopsis "Genome wide annotation for Yeast")
+    (description
+     "Genome wide annotation for Yeast, primarily based on mapping using ORF
+identifiers from @acronym{SGD, Saccharomyces Genome Database}.")
+    (license license:artistic2.0)))
+
 (define-public r-pd-mapping50k-xba240
   (package
     (name "r-pd-mapping50k-xba240")