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[bug#62428,10/14] gnu: Add r-arrayquality.

Message ID 20230324231900.28367-10-madalinionel.patrascu@mdc-berlin.de
State New
Headers show
Series [bug#62428,01/14] gnu: Add r-anota2seq. | expand

Commit Message

Mădălin Ionel Patrașcu March 24, 2023, 11:18 p.m. UTC 
* gnu/packages/bioconductor.scm (r-arrayquality): New variable.
---
 gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
 1 file changed, 25 insertions(+)
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Patch

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 62cd786842..7a904d3d08 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3251,6 +3251,31 @@  (define-public r-arraymvout
 error rate.")
     (license license:artistic2.0)))
 
+(define-public r-arrayquality
+  (package
+    (name "r-arrayquality")
+    (version "1.76.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "arrayQuality" version))
+       (sha256
+        (base32 "0b5q71bpl9ln26622jvchd4f9i4kwayqkm9b75yj0a69imbfcn4s"))))
+    (properties `((upstream-name . "arrayQuality")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-gridbase
+           r-hexbin
+           r-limma
+           r-marray
+           r-rcolorbrewer))
+    (home-page "http://arrays.ucsf.edu/")
+    (synopsis "Assessing array quality on spotted arrays")
+    (description
+     "This package provides functions for performing print-run and array level
+quality assessment.")
+    (license license:lgpl2.0+)))
+
 (define-public r-asafe
   (package
     (name "r-asafe")