@@ -3190,6 +3190,44 @@ (define-public r-antiprofiles
tumor samples from healthy controls.")
(license license:artistic2.0)))
+(define-public r-arrayqualitymetrics
+ (package
+ (name "r-arrayqualitymetrics")
+ (version "3.54.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "arrayQualityMetrics" version))
+ (sha256
+ (base32 "0jz9b3f8x1aal4sskq1a09jpavhm8alggwbj3ka42fb89xymrz33"))))
+ (properties `((upstream-name . "arrayQualityMetrics")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-affy
+ r-affyplm
+ r-beadarray
+ r-biobase
+ r-genefilter
+ r-gridsvg
+ r-hmisc
+ r-hwriter
+ r-lattice
+ r-latticeextra
+ r-limma
+ r-rcolorbrewer
+ r-setrng
+ r-svglite
+ r-vsn
+ r-xml))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/arrayQualityMetrics")
+ (synopsis "Quality metrics report for microarray data sets")
+ (description
+ "This package generates microarray quality metrics reports for data in
+Bioconductor microarray data containers (ExpressionSet, NChannelSet, AffyBatch).
+One and two color array platforms are supported.")
+ (license license:lgpl2.0+)))
+
(define-public r-arrayexpress
(package
(name "r-arrayexpress")