@@ -5581,6 +5581,56 @@ (define-public r-complexheatmap
self-defined annotation graphics.")
(license license:gpl2+)))
+;;This package depends on r-complexheatmap
+(define-public r-conos
+ (package
+ (name "r-conos")
+ (version "1.5.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "conos" version))
+ (sha256
+ (base32 "1wdhb3jxh4id6xaghawzip8s264g9jxp4i5xy7jfhi67yfxszx6w"))))
+ (properties `((upstream-name . "conos")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-abind
+ r-complexheatmap
+ r-cowplot
+ r-dendextend
+ r-dplyr
+ r-ggplot2
+ r-ggrepel
+ r-gridextra
+ r-igraph
+ r-irlba
+ r-leidenalg
+ r-magrittr
+ r-matrix
+ r-n2r
+ r-r6
+ r-rcpp
+ r-rcpparmadillo
+ r-rcppeigen
+ r-rcppprogress
+ r-reshape2
+ r-rlang
+ r-rtsne
+ r-sccore
+))
+ (home-page "https://github.com/kharchenkolab/conos")
+ (synopsis "Clustering on network of samples")
+ (description
+ "This package wires together large collections of single-cell RNA-seq datasets,
+which allows for both the identification of recurrent cell clusters and the propagation
+of information between datasets in multi-sample or atlas-scale collections. Conos
+focuses on the uniform mapping of homologous cell types across heterogeneous sample
+collections. For instance, users could investigate a collection of dozens of
+peripheral blood samples from cancer patients combined with dozens of controls,
+which perhaps includes samples of a related tissue such as lymph nodes.")
+ (license license:gpl3)))
+
(define-public r-copywriter
(package
(name "r-copywriter")