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(license license:gpl2+))) +;;This package depends on r-complexheatmap +(define-public r-conos + (package + (name "r-conos") + (version "1.5.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "conos" version)) + (sha256 + (base32 "1wdhb3jxh4id6xaghawzip8s264g9jxp4i5xy7jfhi67yfxszx6w")))) + (properties `((upstream-name . "conos"))) + (build-system r-build-system) + (propagated-inputs + (list r-abind + r-complexheatmap + r-cowplot + r-dendextend + r-dplyr + r-ggplot2 + r-ggrepel + r-gridextra + r-igraph + r-irlba + r-leidenalg + r-magrittr + r-matrix + r-n2r + r-r6 + r-rcpp + r-rcpparmadillo + r-rcppeigen + r-rcppprogress + r-reshape2 + r-rlang + r-rtsne + r-sccore +)) + (home-page "https://github.com/kharchenkolab/conos") + (synopsis "Clustering on network of samples") + (description + "This package wires together large collections of single-cell RNA-seq datasets, +which allows for both the identification of recurrent cell clusters and the propagation +of information between datasets in multi-sample or atlas-scale collections. Conos +focuses on the uniform mapping of homologous cell types across heterogeneous sample +collections. For instance, users could investigate a collection of dozens of +peripheral blood samples from cancer patients combined with dozens of controls, +which perhaps includes samples of a related tissue such as lymph nodes.") + (license license:gpl3))) + (define-public r-copywriter (package (name "r-copywriter")