@@ -22401,6 +22401,48 @@ (define-public r-lintr
code edited with @code{RStudio IDE}, @code{Emacs} and @code{Vim}.")
(license license:expat)))
+(define-public r-sccore
+ (package
+ (name "r-sccore")
+ (version "1.0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "sccore" version))
+ (sha256
+ (base32 "12gm7pb6xbvf9kdsgl7ldw1c54ga9fgk99ps2kx2cq91q9m0ld4r"))))
+ (properties `((upstream-name . "sccore")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-dplyr
+ r-ggplot2
+ r-ggrepel
+ r-igraph
+ r-irlba
+ r-magrittr
+ r-matrix
+ r-pbmcapply
+ r-proc
+ r-rcpp
+ r-rcpparmadillo
+ r-rcppeigen
+ r-rcppprogress
+ r-rlang
+ r-scales
+ r-tibble
+ r-uwot
+ r-withr))
+ (home-page "https://github.com/kharchenkolab/sccore")
+ (synopsis "Core utilities for single-cell RNA-Seq")
+ (description
+ "This package implements core utilities for single-cell RNA-seq data analysis.
+Contained within are utility functions for working with @acronym{DE, differential
+expression} matrices and count matrices, a collection of functions for manipulating
+and plotting data via ggplot2, and functions to work with cell graphs and cell
+embeddings. Graph-based methods include embedding kNN cell graphs into a UMAP,
+collapsing vertices of each cluster in the graph, and propagating graph labels.")
+ (license license:gpl3)))
+
(define-public r-scs
(package
(name "r-scs")