@@ -488,106 +488,8 @@ (define-public python-pandas
multidimensional, potentially heterogeneous) and time series data both easy
and intuitive. It aims to be the fundamental high-level building block for
doing practical, real world data analysis in Python.")
- (properties `((python2-variant . ,(delay python2-pandas))))
(license license:bsd-3)))
-;; Pandas 0.24.x are the last versions that support Python 2.
-(define-public python2-pandas
- (let ((pandas (package-with-python2
- (strip-python2-variant python-pandas))))
- (package
- (inherit pandas)
- (version "0.24.2")
- (source (origin
- (method url-fetch)
- (uri (pypi-uri "pandas" version))
- (sha256
- (base32
- "18imlm8xbhcbwy4wa957a1fkamrcb0z988z006jpfda3ki09z4ag"))
- (modules '((guix build utils)))
- (snippet
- '(begin
- ;; Adjust for renamed error message in Python 2.7.17. Taken
- ;; from <https://github.com/pandas-dev/pandas/pull/29294>.
- (substitute* "pandas/io/parsers.py"
- (("if 'NULL byte' in msg:")
- "if 'NULL byte' in msg or 'line contains NUL' in msg:"))))))
- (arguments
- `(#:modules ((guix build utils)
- (guix build python-build-system)
- (ice-9 ftw)
- (srfi srfi-26))
- #:python ,python-2
- #:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'patch-which
- (lambda* (#:key inputs #:allow-other-keys)
- (let ((which (assoc-ref inputs "which")))
- (substitute* "pandas/io/clipboard/__init__.py"
- (("^CHECK_CMD = .*")
- (string-append "CHECK_CMD = \"" which "\"\n"))))))
- (replace 'check
- (lambda _
- (let ((build-directory
- (string-append
- (getcwd) "/build/"
- (car (scandir "build"
- (cut string-prefix? "lib." <>))))))
- ;; Disable the "strict data files" option which causes
- ;; the build to error out if required data files are
- ;; not available (as is the case with PyPI archives).
- (substitute* "setup.cfg"
- (("addopts = --strict-data-files") "addopts = "))
- (with-directory-excursion build-directory
- ;; Delete tests that require "moto" which is not yet
- ;; in Guix.
- (for-each delete-file
- '("pandas/tests/io/conftest.py"
- "pandas/tests/io/json/test_compression.py"
- "pandas/tests/io/parser/test_network.py"
- "pandas/tests/io/test_parquet.py"))
- (invoke "pytest" "-vv" "pandas" "--skip-slow"
- "--skip-network" "-k"
- ;; XXX: Due to the deleted tests above.
- "not test_read_s3_jsonl"))))))))
- (propagated-inputs
- (list python2-numpy python2-openpyxl python2-pytz python2-dateutil
- python2-xlrd))
- (inputs
- (list which))
- (native-inputs
- (list python2-cython
- python2-beautifulsoup4
- python2-lxml
- python2-html5lib
- python2-nose
- python2-pytest
- python2-pytest-mock)))))
-
-(define-public python2-pyflow
- (package
- (name "python2-pyflow")
- (version "1.1.20")
- (source (origin
- (method url-fetch)
- (uri (string-append
- "https://github.com/Illumina/pyflow/releases/download/v"
- version "/pyflow-" version ".tar.gz"))
- (sha256
- (base32
- "1bvfvviw58cndyn862qnv9nj3d9cd3a0dm4vc4sd9vwq8a6z1riv"))))
- (build-system python-build-system)
- (arguments
- `(#:tests? #f ; There is no test suite.
- ;; There is no official Python 3-compatible version and upstream is
- ;; dead. See https://github.com/Illumina/pyflow/issues/20.
- #:python ,python-2))
- (home-page "https://illumina.github.io/pyflow/")
- (synopsis "Tool to manage tasks in a task dependency graph")
- (description "This package is a Python module to manage tasks in the
-context of a task dependency graph. It has some similarities to make.")
- (license license:bsd-2)))
-
(define-public python-pythran
(package
(name "python-pythran")