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[bug#66966,03/13] gnu: Add r-bsgenome-ecoli-ncbi-20080805.

Message ID 39fc6265bb8381c1eb751d96f6c7f06b56710049.1699268809.git.madalinionel.patrascu@mdc-berlin.de
State New
Headers show
Series [bug#66966,01/13] gnu: Add r-breastcancervdx. | expand

Commit Message

Mădălin Ionel Patrașcu Nov. 6, 2023, 11:06 a.m. UTC 
* gnu/packages/bioconductor.scm (r-bsgenome-ecoli-ncbi-20080805):
    New variable.

Change-Id: Ic42527fa334be4c23ebe2e19461571d899db77ca
---
 gnu/packages/bioconductor.scm | 22 ++++++++++++++++++++++
 1 file changed, 22 insertions(+)
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Patch

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 47931061af..40402f798f 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -395,6 +395,28 @@  (define-public r-bsgenome-drerio-ucsc-danrer11
 as provided by UCSC (danRer11, May 2017) and stored in Biostrings objects.")
     (license license:artistic2.0)))
 
+(define-public r-bsgenome-ecoli-ncbi-20080805
+  (package
+    (name "r-bsgenome-ecoli-ncbi-20080805")
+    (version "1.3.1000")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "BSgenome.Ecoli.NCBI.20080805" version
+                              'annotation))
+       (sha256
+        (base32 "1l7mjyys1kaq4mbia9jamyw6sd0ij1wypwxvwy8aksan3gcfnh27"))))
+    (properties `((upstream-name . "BSgenome.Ecoli.NCBI.20080805")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-bsgenome))
+    (home-page
+     "https://bioconductor.org/packages/BSgenome.Ecoli.NCBI.20080805")
+    (synopsis "Escherichia coli full genomes")
+    (description
+     "Escherichia coli full genomes for several strains as provided by NCBI on
+2008/08/05 and stored in Biostrings objects.")
+    (license license:artistic2.0)))
+
 (define-public r-bsgenome-hsapiens-1000genomes-hs37d5
   (package
     (name "r-bsgenome-hsapiens-1000genomes-hs37d5")