@@ -14960,6 +14960,46 @@ (define-public r-wavcluster
procedures that induce nucleotide substitutions (e.g. BisSeq).")
(license license:gpl2)))
+(define-public r-tilingarray
+ (package
+ (name "r-tilingarray")
+ (version "1.76.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "tilingArray" version))
+ (sha256
+ (base32
+ "19bkgblpkcp3w3sdyn82c37gkz1sv3r4d546zpbnh36q2pi3l4zd"))))
+ (properties `((upstream-name . "tilingArray")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-affy
+ r-biobase
+ r-genefilter
+ r-pixmap
+ r-rcolorbrewer
+ r-strucchange
+ r-vsn))
+ (home-page "https://bioconductor.org/packages/tilingArray")
+ (synopsis "Transcript mapping with high-density oligonucleotide tiling arrays")
+ (description
+ "The package provides functionality that can be useful for the analysis of
+the high-density tiling microarray data (such as from Affymetrix genechips) or for
+measuring the transcript abundance and the architecture. The main functionalities
+of the package are:
+@enumerate
+@item the class segmentation for representing partitionings of a linear series of
+data;
+@item the function segment for fitting piecewise constant models using a dynamic
+programming algorithm that is both fast and exact;
+@item the function confint for calculating confidence intervals using the strucchange
+package;
+@item the function plotAlongChrom for generating pretty plots;
+@item the function normalizeByReference for probe-sequence dependent response
+adjustment from a (set of) reference hybridizations.
+@end enumerate")
+ (license license:artistic2.0)))
+
(define-public r-timeseriesexperiment
(package
(name "r-timeseriesexperiment")