[bug#61220,01/10] gnu: Add r-glad.
Commit Message
* gnu/packages/bioconductor.scm (r-glad): New variable.
---
gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
base-commit: 6564a04efaf506a5ef51a7c100144fa31bbe1f31
Comments
Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:
> * gnu/packages/bioconductor.scm (r-glad): New variable.
[…]
Thanks for this patch series.
I applied them all after changes to the description of almost all
packages, and changes to the line comments. I also moved gsl from
propagated-inputs to inputs.
@@ -6122,6 +6122,31 @@ (define-public r-genomicranges
manipulating genomic intervals and variables defined along a genome.")
(license license:artistic2.0)))
+(define-public r-glad
+ (package
+ (name "r-glad")
+ (version "2.62.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "GLAD" version))
+ (sha256
+ (base32
+ "0gb52ic5r6nkgm2ynm174vcvbmkbhhjgv71lsmxpxzcsb6rr7qj6"))))
+ (properties `((upstream-name . "GLAD")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list gsl
+ r-aws))
+ (native-inputs (list pkg-config))
+ (home-page "http://bioinfo.curie.fr")
+ (synopsis "Gain and loss analysis of DNA")
+ (description
+ "This package helps with the analysis of array @acronym{CGH, comparative
+genomic hybridization} data by detecting of the breakpoints in the genomic profiles
+and assignment of a status (gain, normal or loss) to each chromosomal regions
+identified.")
+ (license license:gpl2)))
+
(define-public r-gostats
(package
(name "r-gostats")