@@ -7848,6 +7848,50 @@ (define-public r-r4rna
with numerical methods for computing statistics for each.")
(license license:gpl3)))
+(define-public r-radiogx
+ (package
+ (name "r-radiogx")
+ (version "2.4.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "RadioGx" version))
+ (sha256
+ (base32 "18zqfnwjil4mv7fgh4wvnniyybmyqkg0hk2wc57rcn0mlppa3602"))))
+ (properties `((upstream-name . "RadioGx")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-assertthat
+ r-biobase
+ r-biocgenerics
+ r-biocparallel
+ r-catools
+ r-coregx
+ r-data-table
+ r-downloader
+ r-magicaxis
+ r-matrixstats
+ r-rcolorbrewer
+ r-reshape2
+ r-s4vectors
+ r-scales
+ r-summarizedexperiment))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/RadioGx")
+ (synopsis "Analysis of large-scale radio-genomic data")
+ (description
+ "This package is a computational tool box for radio-genomic analysis which
+integrates radio-response data, radio-biological modelling and comprehensive
+cell line annotations for hundreds of cancer cell lines. The @code{RadioSet}
+class enables creation and manipulation of standardized datasets including
+information about cancer cells lines, radio-response assays and dose-response
+indicators. Included methods allow fitting and plotting dose-response data
+using established radio-biological models along with quality control to validate
+results. Additional functions related to fitting and plotting dose response
+curves, quantifying statistical correlation and calculating @acronym{AUC, area
+under the curve} or @acronym{SF, survival fraction} are included.")
+ (license license:gpl3)))
+
(define-public r-raggedexperiment
(package
(name "r-raggedexperiment")