@@ -10014,6 +10014,49 @@ (define-public r-scmap
different experiment.")
(license license:gpl3)))
+(define-public r-screpertoire
+ (package
+ (name "r-screpertoire")
+ (version "1.12.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "scRepertoire" version))
+ (sha256
+ (base32 "1wgs8dv5zl82iciy86w5ws1gq8v2piklcifbw7gmbw60kijyr2l1"))))
+ (properties `((upstream-name . "scRepertoire")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-doparallel
+ r-dplyr
+ r-ggalluvial
+ r-ggplot2
+ r-ggraph
+ r-igraph
+ r-plyr
+ r-powertcr
+ r-reshape2
+ r-rlang
+ r-seuratobject
+ r-singlecellexperiment
+ r-stringdist
+ r-stringr
+ r-summarizedexperiment
+ r-tidygraph
+ r-vegan))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/scRepertoire")
+ (synopsis "Toolkit for single-cell immune receptor profiling")
+ (description
+ "The scRepertoire package was built to process data derived from the 10x
+Genomics Chromium Immune Profiling for both @acronym{TCR, T-cell receptor} and
+@acronym{Ig, immunoglobulin} enrichment workflows and subsequently interacts with
+the popular Seurat and SingleCellExperiment R packages. It also allows for
+general analysis of single-cell clonotype information without the use of
+expression information. The package functions as a wrapper for Startrac and
+powerTCR R packages.")
+ (license license:gpl2)))
+
(define-public r-scry
(package
(name "r-scry")