mbox series

[bug#63542,00/19] : gnu: astronomy: May updates.

Message ID cover.1684276664.git.sharlatanus@gmail.com
Headers
Series : gnu: astronomy: May updates. |

Message

Sharlatan Hellseher May 16, 2023, 11:20 p.m. UTC 
Hi Guix!

After core-update was merged and some issues with main packages related to
astronomy was fixed there is a time to update rest of them.

Here I've updated astronomical Python packages and simplify packaging (used
Gexps or pyproject-build-system). I'd like to add all of my pending packages
in the nearest future, I hope it will be useful for community.

> ./pre-inst-env guix build $(./pre-inst-env guix refresh --list-dependent python-asdf-astropy python-gwcs python-sunpy python-spherical-geometry python-sgp4 python-ccdproc python-reproject python-pyvo python-fitsio python-astropy-healpix python-astroquery python-pynbody python-astral python-poppy python-photutils python-ephem python-asdf | awk -F: '{print $2}')
> /gnu/store/da3yv8v7gxcar4abmhkg1vlh6nrizqq6-python-sunpy-4.1.5
> /gnu/store/adg4dm7x0m7jcc9l85b85q2hpsyl0rvg-python-astroalign-2.4.2
> /gnu/store/16mdzw3xfqcd0x4nbs648way1z6psky6-python-poliastro-0.17.0
> /gnu/store/h709xxp1zn0mdv9p23g1c7r80k5vsg38-python-spherical-geometry-1.2.22
> /gnu/store/ksmy9f2n633f52qp929wldhlisms8jfg-python-poppy-1.1.1
> /gnu/store/r12mnqg0yx1gy0zrmbr95gy719rxj4w1-python-regions-0.7
> /gnu/store/493halkqfx3dz8jrc51211n3yfxswxm3-python-photutils-1.7.0

Sharlatan Hellseher (19):
  gnu: python-asdf-astropy: Update to 0.4.0.
  gnu: python-asdf-wcs-schemas: Symplify.
  gnu: python-gwcs: Update to 0.18.3.
  gnu: python-sunpy: Update to 4.1.5.
  gnu: python-spherical-geometry: Add update note.
  gnu: python-sgp4: Update to 2.22.
  gnu: python-ccdproc: Enable tests.
  gnu: python-reproject: Update to 0.10.0.
  gnu: python-pyvo: Update to 1.4.1.
  gnu: python-fitsio: Use Gexp.
  gnu: python-astropy-healpix: Use Gexp.
  gnu: python-astroquery: Use Gexp.
  gnu: python-pynbody: Update to 1.3.1, simplify.
  gnu: python-astral: Update to 3.2.
  gnu: python-poppy: Update to 1.1.1.
  gnu: python-photutils: Update to 1.7.0.
  gnu: python-ephem: Update to 4.1.4.
  gnu: python-asdf: Update to 2.15.0.
  gnu: python-asdf-coordinates-schemas: Update to 0.2.0.

 gnu/packages/astronomy.scm | 366 ++++++++++++++++++-------------------
 1 file changed, 182 insertions(+), 184 deletions(-)


base-commit: 242cc93438d67f5b35602d5add02e230850b0b43

Comments

Sharlatan Hellseher May 23, 2023, 6:33 p.m. UTC | #1 
Hi Guix!

A gentle ping on this issue.
Please let me know if it requires any adjustments.

I would like bring python-jwst (James Webb Space Telescope) to Guix, hoping
it would bring more attention to the project from astronomical community.

Thanks,
Oleg
Vinicius Monego May 23, 2023, 10:26 p.m. UTC | #2 
Em ter, 2023-05-23 às 19:33 +0100, Sharlatan Hellseher escreveu:
> Hi Guix!
> 
> A gentle ping on this issue.
> Please let me know if it requires any adjustments.
> 
> I would like bring python-jwst (James Webb Space Telescope) to Guix,
> hoping it would bring more attention to the project from astronomical
> community.
> 
> Thanks,
> Oleg
> 
> 

Hi Sharlatan,

I requested adjustments on patches 4, 12, 14 and 18. Could you send a
v2 with the changes?

Vinicius
Efraim Flashner May 24, 2023, 6:55 a.m. UTC | #3 
On Tue, May 23, 2023 at 07:33:22PM +0100, Sharlatan Hellseher wrote:
> Hi Guix!
> 
> A gentle ping on this issue.
> Please let me know if it requires any adjustments.

I see that Vinicius Monego is looking for a v2 on patches 4, 12, 14 and
18 to address a couple of issues. Can you take a look at those? Thanks.

> I would like bring python-jwst (James Webb Space Telescope) to Guix, hoping
> it would bring more attention to the project from astronomical community.

That would be really cool.
Sharlatan Hellseher May 24, 2023, 9:51 p.m. UTC | #4 
Hi Vinicius and Efraim!

Thank you for the review and here is my v2 of patch set.

* 04 gnu: python-sunpy: Update to 4.1.5: opencv moved to native-inputs to
let tests pass but do not propagate it to user's profile.

* 12 gnu: python-astroquery: Use Gexp: My attempt to use pyproject-build-system
was unsuccessful and caused build to fail, I might come back to it later as
with python-build-system the package passed all phased just fine.

* 14 gnu: python-astral: Update to 3.2: I've skipped tests directly without
arguments.

* 18 gnu: python-asdf: Update to 2.15.0: Only update is present and the
enabling test commit is moved to new 20.

Sharlatan Hellseher (20):
  gnu: python-asdf-astropy: Update to 0.4.0.
  gnu: python-asdf-wcs-schemas: Symplify.
  gnu: python-gwcs: Update to 0.18.3.
  gnu: python-sunpy: Update to 4.1.5.
  gnu: python-spherical-geometry: Add update note.
  gnu: python-sgp4: Update to 2.22.
  gnu: python-ccdproc: Enable tests.
  gnu: python-reproject: Update to 0.10.0.
  gnu: python-pyvo: Update to 1.4.1.
  gnu: python-fitsio: Use Gexp.
  gnu: python-astropy-healpix: Use Gexp.
  gnu: python-astroquery: Use Gexp.
  gnu: python-pynbody: Update to 1.3.1, simplify.
  gnu: python-astral: Update to 3.2.
  gnu: python-poppy: Update to 1.1.1.
  gnu: python-photutils: Update to 1.7.0.
  gnu: python-ephem: Update to 4.1.4.
  gnu: python-asdf: Update to 2.15.0.
  gnu: python-asdf-coordinates-schemas: Update to 0.2.0.
  gnu: python-asdf: Enable tests.

 gnu/packages/astronomy.scm | 350 +++++++++++++++++--------------------
 1 file changed, 165 insertions(+), 185 deletions(-)


base-commit: 242cc93438d67f5b35602d5add02e230850b0b43