@@ -2966,6 +2966,44 @@ (define-public r-dexseq
exploration of the results.")
(license license:gpl3+)))
+(define-public r-diffcyt
+ (package
+ (name "r-diffcyt")
+ (version "1.14.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "diffcyt" version))
+ (sha256
+ (base32 "1yc9mlc0ifb7h6rzskq97bsdq1kwdp5qq9l9mciwyxf6yjkmv5ni"))))
+ (properties `((upstream-name . "diffcyt")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-circlize
+ r-complexheatmap
+ r-dplyr
+ r-edger
+ r-flowcore
+ r-flowsom
+ r-limma
+ r-lme4
+ r-magrittr
+ r-multcomp
+ r-reshape2
+ r-s4vectors
+ r-summarizedexperiment
+ r-tidyr))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/lmweber/diffcyt")
+ (synopsis "Differential discovery in high-dimensional cytometry")
+ (description
+ "Statistical methods for differential discovery analyses in
+high-dimensional cytometry data (including flow cytometry, mass cytometry or
+CyTOF, and oligonucleotide-tagged cytometry), based on a combination of
+high-resolution clustering and empirical Bayes moderated tests adapted from
+transcriptomics.")
+ (license license:expat)))
+
(define-public r-dirichletmultinomial
(package
(name "r-dirichletmultinomial")