From patchwork Wed Mar 20 22:27:31 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62028 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 1CAF027BBED; Wed, 20 Mar 2024 22:30:52 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 9EE0127BBEA for ; Wed, 20 Mar 2024 22:30:50 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S1-0000Ym-7s; Wed, 20 Mar 2024 18:30:25 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4Rz-0000YO-9Y for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:23 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4Rz-0005hH-28 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:23 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sc-0005ao-Fx; Wed, 20 Mar 2024 18:31:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 01/49] gnu: calcmysky: Update to 0.3.2. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.41 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:41 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:31 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (calcmysky): Update to 0.3.2. Change-Id: I27d6c833aba5a5d8d398a6170485d0e62223ca1b --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index d7747f051d..8ae25b65e2 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -223,7 +223,7 @@ (define-public calceph (define-public calcmysky (package (name "calcmysky") - (version "0.3.1") + (version "0.3.2") (source (origin (method git-fetch) @@ -232,7 +232,7 @@ (define-public calcmysky (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "14jbaf9m9wig2bs7a531dvpmdkqpd09lmyvjvj1s0mhgh9g0x9m2")))) + (base32 "1kybjlddrm8x4x5y82qczi6z1d2riv6zcfjzrh7pzg2vwj89izh0")))) (build-system cmake-build-system) (arguments (list #:configure-flags From patchwork Wed Mar 20 22:27:32 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62051 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2DFFD27BBE2; Wed, 20 Mar 2024 22:32:04 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id DFE6327BBF0 for ; Wed, 20 Mar 2024 22:32:01 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S3-0000ZJ-L1; Wed, 20 Mar 2024 18:30:27 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S0-0000Ye-PS for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:24 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S0-0005hN-Hb for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:24 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sc-0005b2-W8; Wed, 20 Mar 2024 18:31:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 02/49] gnu: splash: Update to 3.10.3. Resent-From: Sharlatan Hellseher Original-Sender: "Debbugs-submit" Resent-CC: andreas@enge.fr, bavier@posteo.net, sharlatanus@gmail.com, guix-patches@gnu.org Resent-Date: Wed, 20 Mar 2024 22:31:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 69924 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 69924@debbugs.gnu.org Cc: Sharlatan Hellseher , Andreas Enge , Eric Bavier , Sharlatan Hellseher X-Debbugs-Original-Xcc: Andreas Enge , Eric Bavier , Sharlatan Hellseher Received: via spool by 69924-submit@debbugs.gnu.org id=B69924.171097383221027 (code B ref 69924); Wed, 20 Mar 2024 22:31:02 +0000 Received: (at 69924) by debbugs.gnu.org; 20 Mar 2024 22:30:32 +0000 Received: from localhost ([127.0.0.1]:36295 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rn4S8-0005T0-FP for submit@debbugs.gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from mail-wm1-f42.google.com ([209.85.128.42]:49457) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1rn4S4-0005Rz-Gx for 69924@debbugs.gnu.org; Wed, 20 Mar 2024 18:30:28 -0400 Received: by mail-wm1-f42.google.com with SMTP id 5b1f17b1804b1-414617882b3so2433745e9.3 for <69924@debbugs.gnu.org>; Wed, 20 Mar 2024 15:29:48 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20230601; t=1710973723; x=1711578523; darn=debbugs.gnu.org; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=Kh31xEHXXUJJ5RQlm/cOPDpuU2HIXGzu2KXL1APdmUo=; b=HnEH1ANmF4GvqRKccRGgUlx7J6szsIwRC/Wt8qa1Psi5J+IWK+Wmc7pxnSYXwu0+gs 34h4DycFb1WVhjwTdNC/+4bbkzbJhgxUl5jqJ6FACJJP4K9wF/BXx2iZAHRRJMBRRz0F puVzcgxG6wacUgOYUh9Eq/9SnFnh1c0Z0j0e0TG+dOhksgQsYYDCXA43hpjkjCZADO6I y01pvG0Ge71EK5vauNDERkTK0cJe1ydh9utcztu4bmWU6BlYpeld8rwxId9M1BLrFbej nDRIpTJ48zYoXiqskztBUAhvA6V82+dSS5xQNJYlbNEa5FEsa2OLYdTTD2n9RzzAcBnu Aagw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20230601; t=1710973723; x=1711578523; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=Kh31xEHXXUJJ5RQlm/cOPDpuU2HIXGzu2KXL1APdmUo=; b=SYHgRQM/X29vUTdDK35oVDhp3l4XmU+GG3drgAlYM4jUC4Ld9sc/epcSsUlGxjYPDl 465zZufe7mjtEOES+X+ae/HchIH9n11K7uiZA6y+6+hCfWTY3B9L9/cKHrvlbvEaRPFE SRW8tFMpgW+cu8HprzYMOxm6NkSFucxo3a2sofZeNoNU+2cVxfUKIM4QsjSqFheVSVfM CLyxMdlPnxwptehRAVcE23X12FRWyYgbWisZV5s3kJZjsr0+ePLdMosNRTh12Bmzk73g UGBBCsj5z+z9uVwddeF8oYXLCOWfCQ5zuTYMHX1ly75Yyg+JOmqI3OlGlOxQg4S/ro12 VZxw== X-Gm-Message-State: AOJu0YyqSnffcGxHObe2eEWcmqBK26G6gZT5Kd7piVEdIK+8Lh/8ylTP GekouJ67DchJ5iAa0+OBiYPCHGf0El/AlJ0KC/0EVwxXZhEVzFpFshqmmcnpbPU= X-Google-Smtp-Source: AGHT+IH1dJYuTq4MtMkQozFSZw9KrZU9Wdg8nzwi/csgNRpuIwAadPp15kG8xEMdEmPgH8Ar3JKn1w== X-Received: by 2002:a05:600c:310a:b0:413:ca0:5cd1 with SMTP id g10-20020a05600c310a00b004130ca05cd1mr83373wmo.39.1710973722873; Wed, 20 Mar 2024 15:28:42 -0700 (PDT) Received: from localhost.localdomain (cpc100856-bagu15-2-0-cust368.1-3.cable.virginm.net. [82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.42 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:42 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:32 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (splash): Update to 3.10.3. Change-Id: Ic5f812a3c35fd76c0a722616efea2745a080c859 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 8ae25b65e2..724643d17f 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1203,7 +1203,7 @@ (define-public siril (define-public splash (package (name "splash") - (version "3.10.1") + (version "3.10.3") (source (origin (method git-fetch) (uri (git-reference @@ -1211,7 +1211,7 @@ (define-public splash (commit (string-append "v" version)))) (sha256 (base32 - "1cyg7my2lbpai81nfnlj0r7pvral3kjn31dcq2p4982d2xg0dj87")) + "077s9if7fmccvhsbp0dhvyqcil46vpbgdm1y6qn6h34r8lfqj9z6")) (file-name (git-file-name name version)))) (build-system gnu-build-system) (arguments From patchwork Wed Mar 20 22:27:33 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62060 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CA9B427BBF3; Wed, 20 Mar 2024 22:32:14 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 0B44927BBEA for ; Wed, 20 Mar 2024 22:32:13 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S6-0000co-Ne; Wed, 20 Mar 2024 18:30:30 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S5-0000b8-BC for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:29 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S5-0005i3-1v; Wed, 20 Mar 2024 18:30:29 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Se-0005bV-Ee; Wed, 20 Mar 2024 18:31:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 03/49] gnu: python-blosc: Move to python-compression. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.43 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:43 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:33 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-blosc): Move from here ... * gnu/packages/python-compression.scm: ... to here. Change-Id: Ieed1b399602d0ba64b065d1c03ef0855ac52f71e --- gnu/packages/python-compression.scm | 47 ++++++++++++++++++++++++++++- gnu/packages/python-xyz.scm | 44 --------------------------- 2 files changed, 46 insertions(+), 45 deletions(-) diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm index 691fbd3065..ef289bc4d1 100644 --- a/gnu/packages/python-compression.scm +++ b/gnu/packages/python-compression.scm @@ -3,7 +3,7 @@ ;;; Copyright © 2017, 2019, 2021, 2022 Ricardo Wurmus ;;; Copyright © 2017 Nikita ;;; Copyright © 2017 Julien Lepiller -;;; Copyright © 2018-2020, 2022 Efraim Flashner +;;; Copyright © 2018-2020, 2022, 2023 Efraim Flashner ;;; Copyright © 2020 Nicolas Goaziou ;;; Copyright © 2020, 2022, 2023 Marius Bakke ;;; Copyright © 2021 Brendan Tildesley @@ -38,6 +38,7 @@ (define-module (gnu packages python-compression) #:use-module (gnu packages libffi) #:use-module (gnu packages compression) #:use-module (gnu packages crates-io) + #:use-module (gnu packages cmake) #:use-module (gnu packages check) #:use-module (gnu packages maths) #:use-module (gnu packages pkg-config) @@ -49,6 +50,50 @@ (define-module (gnu packages python-compression) #:use-module (gnu packages rust-apps) #:use-module (gnu packages sphinx)) +(define-public python-blosc + (package + (name "python-blosc") + (version "1.11.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "blosc" version)) + (sha256 + (base32 + "0xmjs28sgpnb940zrhw010dq2m9d8a5h4fgnjyk6645fgfr1j8f2")) + (snippet + #~(begin (use-modules (guix build utils)) + (delete-file-recursively "blosc/c-blosc"))))) + (build-system python-build-system) + (arguments + (list #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'find-blosc + (lambda* (#:key inputs #:allow-other-keys) + (setenv "USE_SYSTEM_BLOSC" "1") + (setenv "Blosc_ROOT" #$(this-package-input "c-blosc")))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "python" "-m" "blosc.test"))))))) + (propagated-inputs + (list python-scikit-build python-numpy)) + (inputs (list c-blosc)) + (native-inputs (list cmake-minimal)) + (home-page "https://github.com/blosc/python-blosc") + (synopsis "Python wrapper for the Blosc data compressor library") + (description "Blosc is a high performance compressor optimized for binary +data. It has been designed to transmit data to the processor cache faster +than the traditional, non-compressed, direct memory fetch approach via a +@code{memcpy()} system call. + +Blosc works well for compressing numerical arrays that contains data with +relatively low entropy, like sparse data, time series, grids with +regular-spaced values, etc. + +This Python package wraps the Blosc library.") + (license license:bsd-3))) + (define-public python-multivolumefile (package (name "python-multivolumefile") diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 7ed8c945be..7eacce5caf 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -27394,50 +27394,6 @@ (define-public python-locket they use the same path.") (license license:bsd-2))) -(define-public python-blosc - (package - (name "python-blosc") - (version "1.11.1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "blosc" version)) - (sha256 - (base32 - "0xmjs28sgpnb940zrhw010dq2m9d8a5h4fgnjyk6645fgfr1j8f2")) - (snippet - #~(begin (use-modules (guix build utils)) - (delete-file-recursively "blosc/c-blosc"))))) - (build-system python-build-system) - (arguments - (list #:phases - #~(modify-phases %standard-phases - (add-after 'unpack 'find-blosc - (lambda* (#:key inputs #:allow-other-keys) - (setenv "USE_SYSTEM_BLOSC" "1") - (setenv "Blosc_ROOT" #$(this-package-input "c-blosc")))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "python" "-m" "blosc.test"))))))) - (propagated-inputs - (list python-scikit-build python-numpy)) - (inputs (list c-blosc)) - (native-inputs (list cmake-minimal)) - (home-page "https://github.com/blosc/python-blosc") - (synopsis "Python wrapper for the Blosc data compressor library") - (description "Blosc is a high performance compressor optimized for binary -data. It has been designed to transmit data to the processor cache faster -than the traditional, non-compressed, direct memory fetch approach via a -@code{memcpy()} system call. - -Blosc works well for compressing numerical arrays that contains data with -relatively low entropy, like sparse data, time series, grids with -regular-spaced values, etc. - -This Python package wraps the Blosc library.") - (license license:bsd-3))) - (define-public python-partd (package (name "python-partd") From patchwork Wed Mar 20 22:27:34 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62064 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 5B8EE27BBEA; Wed, 20 Mar 2024 22:32:18 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6655E27BBF0 for ; Wed, 20 Mar 2024 22:32:16 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S6-0000ci-Eu; Wed, 20 Mar 2024 18:30:30 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S5-0000b4-7P for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:29 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S4-0005hz-Up; Wed, 20 Mar 2024 18:30:28 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sd-0005bC-Oh; Wed, 20 Mar 2024 18:31:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 04/49] gnu: python-blosc: Simplify package. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.43 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:44 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:34 +0000 Message-ID: <2a3ba6c2cd992876d7c018ee5565d72c11a45329.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-compression.scm (python-blosc) [arguments] <#:phases>: Swap to simple lambda in 'find-blosc phase as it already uses this-package-input procedure. Change-Id: I4d3219d9575b9573b0c384b067855fa927f122da --- gnu/packages/python-compression.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm index ef289bc4d1..d076a4e161 100644 --- a/gnu/packages/python-compression.scm +++ b/gnu/packages/python-compression.scm @@ -69,7 +69,7 @@ (define-public python-blosc (list #:phases #~(modify-phases %standard-phases (add-after 'unpack 'find-blosc - (lambda* (#:key inputs #:allow-other-keys) + (lambda _ (setenv "USE_SYSTEM_BLOSC" "1") (setenv "Blosc_ROOT" #$(this-package-input "c-blosc")))) (replace 'check From patchwork Wed Mar 20 22:27:35 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62034 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id DC50E27BBE2; Wed, 20 Mar 2024 22:30:59 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id AE8AE27BBEA for ; Wed, 20 Mar 2024 22:30:56 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S4-0000aM-Tb; Wed, 20 Mar 2024 18:30:28 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S3-0000ZL-LN for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:27 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S3-0005hj-Cz; Wed, 20 Mar 2024 18:30:27 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sf-0005bg-2i; Wed, 20 Mar 2024 18:31:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 05/49] gnu: python-pytest-doctestplus: Update to 1.2.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.44 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:44 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:35 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-check.scm (python-pytest-doctestplus): Update to 1.2.0. [arguments] <#:test-flags>: Disable one more failing test. [home-page]: Update accordingly with lint warning. Change-Id: I353a671741cf887c348d627d9e071e3fedcc4edc --- gnu/packages/python-check.scm | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index 51a38bbcbe..99f52b6846 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -604,26 +604,29 @@ (define-public python-pytest-cookies (define-public python-pytest-doctestplus (package (name "python-pytest-doctestplus") - (version "1.0.0") + (version "1.2.0") (source (origin (method url-fetch) (uri (pypi-uri "pytest-doctestplus" version)) (sha256 - (base32 "17ylfnrcvvp6sd13bfj40jl40paqmjsbywysszb3xqgdr86l8l7n")))) + (base32 "0cmrkgpib869kpy8h8hfkg20w16lakkmbkw8cxdywpmf5wx7dbf5")))) (build-system pyproject-build-system) (arguments (list #:test-flags #~(list "-k" (string-append + ;; Tests requiring network access. "not test_remote_data_url" " and not test_remote_data_float_cmp" " and not test_remote_data_ignore_whitespace" " and not test_remote_data_ellipsis" " and not test_remote_data_requires" - " and not test_remote_data_ignore_warnings")))) + " and not test_remote_data_ignore_warnings" + ;; Requiring git available. + " and not test_generate_diff_basic")))) (native-inputs (list python-numpy python-pytest python-setuptools-scm)) - (home-page "https://github.com/astropy/pytest-doctestplus") + (home-page "https://github.com/scientific-python/pytest-doctestplus") (synopsis "Pytest plugin with advanced doctest features") (description "This package contains a plugin for the Pytest framework that provides From patchwork Wed Mar 20 22:27:36 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62033 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id E69AE27BBEA; Wed, 20 Mar 2024 22:31:02 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5851E27BBE2 for ; Wed, 20 Mar 2024 22:31:01 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S4-0000a5-RH; Wed, 20 Mar 2024 18:30:28 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S3-0000Z9-9V for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:27 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S2-0005hc-QY; Wed, 20 Mar 2024 18:30:27 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sf-0005bn-FE; Wed, 20 Mar 2024 18:31:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 06/49] gnu: python-pytest-arraydiff: Update to 0.6.1. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.45 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:45 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:36 +0000 Message-ID: <4f648367b0c4198e1a4687a62f7622b96c73a051.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-check.scm (python-pytest-arraydiff): Update to 0.6.1. Change-Id: I6dd911eb38597790f66756a77f6086112329a156 --- gnu/packages/python-check.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index 99f52b6846..fe96bd297c 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -545,13 +545,13 @@ (define-public python-pytest-astropy (define-public python-pytest-arraydiff (package (name "python-pytest-arraydiff") - (version "0.5.0") + (version "0.6.1") (source (origin (method url-fetch) (uri (pypi-uri "pytest-arraydiff" version)) (sha256 - (base32 "1livzfbi7ag17hskd5845dh1kdir24f7jrbw8y2s1pyhzyz4jhbi")))) + (base32 "1pk7v96rkypx4ld59f6p8fh5bq371ka8g7bh4h7n4df91x2v2dr9")))) (build-system python-build-system) (arguments ;; Tests require python-astropy, which itself requires this package. From patchwork Wed Mar 20 22:27:37 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62032 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 8005927BBEA; Wed, 20 Mar 2024 22:31:00 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 04CBE27BBEB for ; Wed, 20 Mar 2024 22:30:59 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000hY-Gd; Wed, 20 Mar 2024 18:30:33 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S5-0000b3-7P for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:29 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S4-0005hy-Uz; Wed, 20 Mar 2024 18:30:28 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sf-0005bx-SR; Wed, 20 Mar 2024 18:31:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 07/49] gnu: python-pytest-arraydiff: Enable tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.46 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:46 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:37 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-check.scm (python-pytest-arraydiff): Enable tests. [build-system]: Swap to pyproject-build-system. [arguments] <#:test-flags>: Disable tests requiring python-astropy to break dependencies cycle. Change-Id: I0e4b6681d106a999c6fc12c3fd8c8f084762a92e --- gnu/packages/python-check.scm | 15 ++++++++++----- 1 file changed, 10 insertions(+), 5 deletions(-) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index fe96bd297c..beb151178d 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -552,13 +552,18 @@ (define-public python-pytest-arraydiff (uri (pypi-uri "pytest-arraydiff" version)) (sha256 (base32 "1pk7v96rkypx4ld59f6p8fh5bq371ka8g7bh4h7n4df91x2v2dr9")))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments - ;; Tests require python-astropy, which itself requires this package. - ;; Disable tests to avoid the circular dependency problem. - '(#:tests? #f)) + (list + #:test-flags + #~(list "-k" (string-append + ;; Disable tests requiring python-astropy, to break cycle. + "not test_succeeds_func_fits_hdu" + " and not test_fails" + " and not test_generate" + " and not test_default_format")))) (native-inputs - (list python-pytest python-setuptools-scm)) ; for sanity-check + (list python-pytest python-setuptools-scm)) (propagated-inputs (list python-numpy)) (home-page "https://github.com/astropy/pytest-arraydiff") From patchwork Wed Mar 20 22:27:38 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62038 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id A4B0E27BBEA; Wed, 20 Mar 2024 22:31:22 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,TVD_SPACE_RATIO autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5DCCA27BBE2 for ; Wed, 20 Mar 2024 22:31:20 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000hc-HX; Wed, 20 Mar 2024 18:30:33 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0000d0-6W for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:31 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S6-0005ii-U5; Wed, 20 Mar 2024 18:30:30 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sg-0005c3-9U; Wed, 20 Mar 2024 18:31:06 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 08/49] gnu: python-pytest-filter-subpackage: Update to 0.2.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.46 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:47 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:38 +0000 Message-ID: <00f9c18b57f42b81b0ad7c8e17ad41128a68a22f.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-check.scm (python-pytest-filter-subpackage): Update to 0.2.0. Change-Id: I04f000b3a75f671340fbd351b06265b99acb3856 --- gnu/packages/python-check.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index beb151178d..bee5a468fa 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -668,13 +668,13 @@ (define-public python-pytest-exploratory (define-public python-pytest-filter-subpackage (package (name "python-pytest-filter-subpackage") - (version "0.1.2") + (version "0.2.0") (source (origin (method url-fetch) (uri (pypi-uri "pytest-filter-subpackage" version)) (sha256 - (base32 "10hpl3f7g2bm29lakmp8492b7lr0dp90khfni12m4gl02xks7bhz")))) + (base32 "0mmgg2n8qk6s2kprycjl70lxcpm43dkapplmkf32i0ai6qdqyiiz")))) (build-system pyproject-build-system) (native-inputs (list python-pytest From patchwork Wed Mar 20 22:27:39 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62041 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 13F6527BBEB; Wed, 20 Mar 2024 22:31:28 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id A0F1727BBE2 for ; Wed, 20 Mar 2024 22:31:27 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SA-0000im-Bk; Wed, 20 Mar 2024 18:30:34 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0000e7-OF for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0005j6-Fl; Wed, 20 Mar 2024 18:30:31 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sg-0005cJ-Nc; Wed, 20 Mar 2024 18:31:06 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 09/49] gnu: python-zarr: Update to 2.17.1. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.47 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:47 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:39 +0000 Message-ID: <8f4f9de43b0d32c84589f585c33ece6a8ee9ace8.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-zarr): Update to 2.17.1. Change-Id: Id7873b68bb82400f66539d03fe9a357deb61d58c --- gnu/packages/python-xyz.scm | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 7eacce5caf..2bff593063 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -26969,15 +26969,15 @@ (define-public python-asciitree (define-public python-zarr (package (name "python-zarr") - (version "2.13.3") + (version "2.17.1") (source (origin (method url-fetch) (uri (pypi-uri "zarr" version)) (sha256 (base32 - "135ls2q7zc98pk61a5cnh88j4hnnavcwasrswdjqyqvcc68b096v")))) - (build-system python-build-system) + "0qb2wj60i7v1c95k6m0pskx20ss6dxrj3ym0d7z4c98jfah3ljsn")))) + (build-system pyproject-build-system) (arguments `(#:phases (modify-phases %standard-phases From patchwork Wed Mar 20 22:27:40 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62050 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id B01D227BBE2; Wed, 20 Mar 2024 22:32:03 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id C90BD27BBEC for ; Wed, 20 Mar 2024 22:32:01 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SC-0000lT-7O; Wed, 20 Mar 2024 18:30:36 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0000fZ-Q5 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0005jW-H5; Wed, 20 Mar 2024 18:30:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sh-0005ch-LX; Wed, 20 Mar 2024 18:31:07 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 10/49] gnu: python-partd: Enable tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.48 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:48 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:40 +0000 Message-ID: <16b0d647c8417c77f341509984ac8c2ede75bb69.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches Newer version of the project is migrated to pyproject.toml, this change may help to prepare for the future upgrade. * gnu/packages/python-xyz.scm (python-partd) [build-system]: Swap to pyproject-build-system, allowing to detect tests and run them. Change-Id: Ia4375b83cea6dcbf7781b3dc40f544261075d2ca --- gnu/packages/python-xyz.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 2bff593063..799174ab60 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -27405,7 +27405,7 @@ (define-public python-partd (sha256 (base32 "1sy3vdfyyx3bc5590zb7gwpsmimqz8m992x9hsydq8nmhixqjrxa")))) - (build-system python-build-system) + (build-system pyproject-build-system) (propagated-inputs (list python-blosc python-locket From patchwork Wed Mar 20 22:27:41 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62031 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2D7A627BBF0; Wed, 20 Mar 2024 22:30:59 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id AC9A027BBE2 for ; Wed, 20 Mar 2024 22:30:56 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S7-0000cz-68; Wed, 20 Mar 2024 18:30:31 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S5-0000bx-IK for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:29 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S5-0005iH-A5; Wed, 20 Mar 2024 18:30:29 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sh-0005cV-6a; Wed, 20 Mar 2024 18:31:07 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 11/49] gnu: python-zarr: Speed up tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.49 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:49 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:41 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-zarr): Use G-expressions. [arguments] <#:test-flags>: Parallelize tests to speed them up. <#:phases>: 'disable-service-tests remove trailing #t from lambda. Use standard 'check phase. [native-inputs]: Add python-fsspec, python-h5py, python-pytest-doctestplus, python-pytest-timeout, and python-pytest-xdist. Change-Id: I3fc4e2a1649ad9f95ed9e3fe87e3f57ad4f58af8 --- gnu/packages/python-xyz.scm | 34 ++++++++++++++++++++-------------- 1 file changed, 20 insertions(+), 14 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 799174ab60..360b4db3f1 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -26979,23 +26979,29 @@ (define-public python-zarr "0qb2wj60i7v1c95k6m0pskx20ss6dxrj3ym0d7z4c98jfah3ljsn")))) (build-system pyproject-build-system) (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'disable-service-tests - (lambda _ - (setenv "ZARR_TEST_ABS" "0") - (setenv "ZARR_TEST_MONGO" "0") - (setenv "ZARR_TEST_REDIS" "0") - #t)) - (replace 'check - (lambda _ - (invoke "pytest" "-vv" "-k" "not lmdb") - #t))))) + (list + #:test-flags + #~(list "-n" "auto") + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'disable-service-tests + (lambda _ + (setenv "ZARR_TEST_ABS" "0") + (setenv "ZARR_TEST_MONGO" "0") + (setenv "ZARR_TEST_REDIS" "0")))))) (propagated-inputs - (list python-asciitree python-fasteners python-numcodecs + (list python-asciitree + python-fasteners + python-numcodecs python-numpy)) (native-inputs - (list python-pytest python-setuptools-scm)) + (list python-fsspec + python-pytest + python-h5py + python-pytest-doctestplus + python-pytest-timeout + python-pytest-xdist + python-setuptools-scm)) (home-page "https://github.com/zarr-developers/zarr-python") (synopsis "Chunked, compressed, N-dimensional arrays for Python") (description From patchwork Wed Mar 20 22:27:42 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62058 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id AF2BD27BBEB; Wed, 20 Mar 2024 22:32:11 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 45D3227BBE2 for ; Wed, 20 Mar 2024 22:32:09 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SB-0000k9-0k; Wed, 20 Mar 2024 18:30:35 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000gD-1t for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:33 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0005jK-P2; Wed, 20 Mar 2024 18:30:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Si-0005cv-9W; Wed, 20 Mar 2024 18:31:08 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 12/49] gnu: python-distributed: Speed up tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.49 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:49 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:42 +0000 Message-ID: <4546c2bbc8284fb32279ef5d02c3bf692ad9de7a.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-distributed) [arguments] <#:test-flags>: Add option to run tests in parallel. Disable 3 more flaky tests. [native-inputs]: Add python-pytest-xdist. Sort alphabetically. Change-Id: I588c1a1dc82e3208cc1eeeefbdc58fb080775ac0 --- gnu/packages/python-science.scm | 14 ++++++++++---- 1 file changed, 10 insertions(+), 4 deletions(-) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index b6a116f16b..a01c68cbc3 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -23,6 +23,7 @@ ;;; Copyright © 2022 Antero Mejr ;;; Copyright © 2022 jgart ;;; Copyright © 2023, 2024 Troy Figiel +;;; Copyright © 2024 Sharlatan Hellseher ;;; ;;; This file is part of GNU Guix. ;;; @@ -1688,7 +1689,8 @@ (define-public python-distributed (arguments (list #:test-flags - '(list "-x" "-m" + '(list "-n" "auto" + "-x" "-m" (string-append "not slow" " and not flaky" " and not gpu" @@ -1814,7 +1816,10 @@ (define-public python-distributed ;; These tests are rather flaky " and not test_quiet_quit_when_cluster_leaves" " and not multiple_clients_restart" - " and not test_steal_twice")) + " and not test_steal_twice" + " and not test_task_groups_update_start_stop" + " and not test_web_preload" + " and not test_web_preload_worker")) #:phases #~(modify-phases %standard-phases (add-after 'unpack 'versioneer @@ -1889,10 +1894,11 @@ (define-public python-distributed python-urllib3 python-zict)) (native-inputs - (list python-importlib-metadata + (list python-flaky + python-importlib-metadata python-pytest python-pytest-timeout - python-flaky + python-pytest-xdist python-versioneer)) (home-page "https://distributed.dask.org") (synopsis "Distributed scheduler for Dask") From patchwork Wed Mar 20 22:27:43 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62037 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 0110827BBEC; Wed, 20 Mar 2024 22:31:21 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id AE84627BBEA for ; Wed, 20 Mar 2024 22:31:21 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SA-0000jh-Qc; Wed, 20 Mar 2024 18:30:34 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0000fK-N7 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0005jR-E5; Wed, 20 Mar 2024 18:30:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Si-0005dC-OA; Wed, 20 Mar 2024 18:31:08 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 13/49] gnu: python-dask: Speed up tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.50 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:50 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:43 +0000 Message-ID: <2b0af1a040c21fdb87b39d9994fb59a8c1e15c19.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-dask) [arguments] <#:test-flags>: Add option to run tests in parallel. [native-inputs]: Add python-xdist. Reformat as a list. Change-Id: I9b4b1c53f827e1f5d3edd0908f8e37e1a3bddb71 --- gnu/packages/python-xyz.scm | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 360b4db3f1..4a9069bbed 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -27488,7 +27488,8 @@ (define-public python-dask (list ;; Avoid coverage #:test-flags - #~(list "-m" "not gpu and not slow and not network" + #~(list "-n" "auto" + "-m" "not gpu and not slow and not network" "-k" (string-append ;; This one cannot be interrupted. "not test_interrupt" @@ -27541,7 +27542,10 @@ (define-public python-dask python-pyyaml)) (native-inputs (list python-importlib-metadata - python-pytest python-pytest-runner python-pytest-rerunfailures + python-pytest + python-pytest-rerunfailures + python-pytest-runner + python-pytest-xdist python-versioneer)) (home-page "https://github.com/dask/dask/") (synopsis "Parallel computing with task scheduling") From patchwork Wed Mar 20 22:27:44 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62040 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id EA0E427BBE2; Wed, 20 Mar 2024 22:31:26 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3758C27BBEB for ; Wed, 20 Mar 2024 22:31:25 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S8-0000el-Ib; Wed, 20 Mar 2024 18:30:32 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S6-0000cR-9c for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:30 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S6-0005iX-1d for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:30 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sj-0005dO-6D; Wed, 20 Mar 2024 18:31:09 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 14/49] gnu: python-stdatamodels: Speed up tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.51 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:51 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:44 +0000 Message-ID: <07d21467b55d0550b0c1001f1c2d1c6c4be214ac.1710967273.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches gnu/packages/astronomy.scm (python-stdatamodels): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add "-n" option. [native-inputs]: Add python-pytest-xdist. Change-Id: I43390240a4a0db48d9abab4c34d1c1c771028486 --- gnu/packages/astronomy.scm | 9 ++++++--- 1 file changed, 6 insertions(+), 3 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 724643d17f..4b3ebd642e 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -3181,9 +3181,11 @@ (define-public python-stdatamodels (build-system pyproject-build-system) (arguments (list - ;; Disable tests requiring access to CRDS servers to download ~500MiB of - ;; data. - #:test-flags #~(list "-k" "not test_crds_selectors_vs_datamodel") + #:test-flags + #~(list "-n" "auto" + ;; Disable tests requiring access to CRDS servers to download + ;; ~500MiB of data. + "-k" "not test_crds_selectors_vs_datamodel") #:phases #~(modify-phases %standard-phases (add-before 'check 'set-home @@ -3199,6 +3201,7 @@ (define-public python-stdatamodels (list python-crds python-pytest python-pytest-doctestplus + python-pytest-xdist python-scipy python-semantic-version python-setuptools-scm)) From patchwork Wed Mar 20 22:27:45 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62045 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id C186F27BBE2; Wed, 20 Mar 2024 22:31:44 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 685A527BBEC for ; Wed, 20 Mar 2024 22:31:43 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SC-0000lc-HY; Wed, 20 Mar 2024 18:30:36 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0000du-Lb for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0005j2-CT; Wed, 20 Mar 2024 18:30:31 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sj-0005dd-JE; Wed, 20 Mar 2024 18:31:09 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 15/49] gnu: python-glymur: Speed up tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.52 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:52 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:45 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-glymur): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. [native-inputs]: Add python-pytest-xdist. Change-Id: Ied066330cc24a50b47307cefb2694675be8af0a4 --- gnu/packages/python-xyz.scm | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 4a9069bbed..763345c0c2 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -1956,6 +1956,8 @@ (define-public python-glymur (build-system pyproject-build-system) (arguments (list + #:test-flags + #~(list "-n" "auto") #:phases #~(modify-phases %standard-phases (add-after 'unpack 'patch-library-locations @@ -1981,7 +1983,9 @@ (define-public python-glymur ;; which is patched above. (delete-file "tests/test_config.py")))))) (native-inputs - (list python-pytest python-scikit-image)) + (list python-pytest + python-pytest-xdist + python-scikit-image)) (inputs (list openjpeg ; glymur/lib/openjp2.py libtiff)) ; glymur/lib/tiff.py From patchwork Wed Mar 20 22:27:46 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62036 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 68B3F27BBEB; Wed, 20 Mar 2024 22:31:18 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id F38AC27BBE2 for ; Wed, 20 Mar 2024 22:31:17 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SB-0000kc-Cx; Wed, 20 Mar 2024 18:30:35 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000gA-17 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:33 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0005jl-OM for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sk-0005dv-1M; Wed, 20 Mar 2024 18:31:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 16/49] gnu: python-ginga: Update to 5.0.0. 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Change-Id: I4b6dee90dded7606e823e1a2a6df7a5dead962d4 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 4b3ebd642e..4807f3d190 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -709,13 +709,13 @@ (define-public python-gatspy (define-public python-ginga (package (name "python-ginga") - (version "4.1.1") + (version "5.0.0") (source (origin (method url-fetch) (uri (pypi-uri "ginga" version)) (sha256 - (base32 "0w60w9d2yqhbmggp0dljj5a0sk07gywifjq8nzw3y2v47vzgwqb6")))) + (base32 "1kydi6qqsscgsa55fa2za35vr5j8xjn09lfbnb5ajr8yxdgm4n3y")))) (build-system pyproject-build-system) (propagated-inputs (list ;;python-exifread ; optional, not packed yet in Guix From patchwork Wed Mar 20 22:27:47 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62029 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id E730E27BBEC; Wed, 20 Mar 2024 22:30:52 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 92F3327BBE2 for ; Wed, 20 Mar 2024 22:30:50 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000iQ-QM; Wed, 20 Mar 2024 18:30:33 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0000dB-AD for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:31 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0005il-1D for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:31 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sk-0005e6-Gy; Wed, 20 Mar 2024 18:31:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 17/49] gnu: python-astropy-iers-data: Update to 0.2024.3.18.0.29.47. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.53 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:54 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:47 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-astropy-iers-data): Update to 0.2024.3.18.0.29.47. Change-Id: Ibc243250266bc1a2c3733a05f554389d2f1dac2c --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 4807f3d190..18ff84752b 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1698,13 +1698,13 @@ (define-public python-astropy-iers-data ;; In case of changing the source method git-fetch, consider to check the ;; tag as it's not following the PyPI version, see ;; . - (version "0.2024.2.19.0.28.47") + (version "0.2024.3.18.0.29.47") (source (origin (method url-fetch) (uri (pypi-uri "astropy-iers-data" version)) (sha256 - (base32 "0j42hkl8z42x5n3aacld9cvacjzg79lqsivm3xn6bv1gjgy69br9")))) + (base32 "1mf03iqw09rp6d8hbby33f4jwfjan9gkb1z7xqsjr2jpj7zwpn3y")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:27:48 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62044 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2ACAA27BBEB; Wed, 20 Mar 2024 22:31:43 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id BBA4327BBE2 for ; Wed, 20 Mar 2024 22:31:42 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SA-0000id-2K; Wed, 20 Mar 2024 18:30:34 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0000e8-Tm for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S7-0005jC-JC for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:31 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sl-0005eR-3K; Wed, 20 Mar 2024 18:31:11 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 18/49] gnu: python-cdflib: Update to 1.2.6. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.54 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:54 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:48 +0000 Message-ID: <565bf0b62042e632dfdf8334e3f2ed9c422fb0dd.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-cdflib): Update to 1.2.6. Change-Id: Iae2e39e756e5e9664a1b524aa1155d128dc0292c --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 18ff84752b..0ac26b1e7d 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1927,7 +1927,7 @@ (define-public python-ccdproc (define-public python-cdflib (package (name "python-cdflib") - (version "1.2.4") + (version "1.2.6") (source (origin (method git-fetch) ; no tests in pypi archive @@ -1936,7 +1936,7 @@ (define-public python-cdflib (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "0pjd4dwwlza2592zgdccw1s341s3ikg44pwsr1gk8vjix40m46fr")))) + (base32 "1wxr35sqsdqzf85xyjh1v8hmwwiyv4cn0lr7q8l1kkngfywq5l2r")))) (build-system pyproject-build-system) (arguments ;; Disable shaky test. From patchwork Wed Mar 20 22:27:49 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62030 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 6049027BBF0; Wed, 20 Mar 2024 22:30:57 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id AFFF627BBEB for ; Wed, 20 Mar 2024 22:30:56 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000iY-Tx; Wed, 20 Mar 2024 18:30:33 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0000fu-UE for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0005jd-L5 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sl-0005eg-J3; Wed, 20 Mar 2024 18:31:11 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 19/49] gnu: python-cdflib: Enable all tests. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.55 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:55 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:49 +0000 Message-ID: <2a872a6af097265617e0edbe4a045aa9b7f18a34.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-cdflib) [arguments] <#:test-flags>: Remove it to enable all tests. Change-Id: I0fd44c117519efb306573d5ec603c430dbb1dc8c --- gnu/packages/astronomy.scm | 7 ++----- 1 file changed, 2 insertions(+), 5 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 0ac26b1e7d..382da91b4c 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1930,7 +1930,7 @@ (define-public python-cdflib (version "1.2.6") (source (origin - (method git-fetch) ; no tests in pypi archive + (method git-fetch) ; no tests in PyPI release (uri (git-reference (url "https://github.com/MAVENSDC/cdflib") (commit version))) @@ -1939,10 +1939,7 @@ (define-public python-cdflib (base32 "1wxr35sqsdqzf85xyjh1v8hmwwiyv4cn0lr7q8l1kkngfywq5l2r")))) (build-system pyproject-build-system) (arguments - ;; Disable shaky test. - ;; See https://github.com/MAVENSDC/cdflib/issues/234 - (list #:test-flags #~(list "-k" "not test_compute_cdfepoch16") - #:phases + (list #:phases #~(modify-phases %standard-phases (add-before 'build 'set-env-version (lambda _ From patchwork Wed Mar 20 22:27:50 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62043 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 776CA27BBE2; Wed, 20 Mar 2024 22:31:39 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id D3A8127BBEB for ; Wed, 20 Mar 2024 22:31:37 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SA-0000jL-Ld; Wed, 20 Mar 2024 18:30:34 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0000fW-Pp for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S8-0005jX-H5 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sm-0005ep-1t; Wed, 20 Mar 2024 18:31:12 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 20/49] gnu: python-asdf-unit-schemas: Update to 0.2.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.56 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:56 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:50 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf-unit-schemas): Update to 0.2.0. Change-Id: Ib767a5b3e1d58205e18eb71465a1505d6ba7a7eb --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 382da91b4c..808cbb46d6 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4463,14 +4463,14 @@ (define python-asdf-time-schemas (define python-asdf-unit-schemas (package (name "python-asdf-unit-schemas") - (version "0.1.0") + (version "0.2.0") (source (origin (method url-fetch) (uri (pypi-uri "asdf_unit_schemas" version)) (sha256 (base32 - "16grpx3a9h0v1wirp0zqrfsxm867v5c0xyr98pylzziy45kqvds2")))) + "0h24gvm1wip4gh3fw5ki8kwnvcy8gw6b6pajw3i1zvriamdw95fr")))) (build-system pyproject-build-system) (arguments ;; Dependency cycle with python-asdf From patchwork Wed Mar 20 22:27:51 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62052 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 98A3F27BBE2; Wed, 20 Mar 2024 22:32:04 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id C586A27BBEB for ; Wed, 20 Mar 2024 22:32:01 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SC-0000kt-1P; Wed, 20 Mar 2024 18:30:36 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000iK-Ne for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:33 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S9-0005kH-FD for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:33 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sm-0005fJ-Vw; Wed, 20 Mar 2024 18:31:12 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 21/49] gnu: python-asdf-standard: Update to 1.1.1. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.56 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:57 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:51 +0000 Message-ID: <031b36ebbf4727cda69cab5927dd2d7321d41ed6.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf-standard): Update to 1.1.1. [arguments] <#:phases>: Swap 'remove-blocking-tests phases to use <#:test-flags>. <#:test-flags>: Add more file to ignore to break cycle with python-asdf. Change-Id: I8c80d4371adf55de77ef718a21bf8599d0fce17e --- gnu/packages/astronomy.scm | 21 ++++++++++----------- 1 file changed, 10 insertions(+), 11 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 808cbb46d6..8619dac066 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4297,25 +4297,24 @@ (define-public python-asdf (define-public python-asdf-standard (package (name "python-asdf-standard") - (version "1.0.3") + (version "1.1.1") (source (origin (method url-fetch) (uri (pypi-uri "asdf_standard" version)) (sha256 (base32 - "0i7xdjwn5prg2hcnf1zhw57mszc68jjr5sv4rimpzcg7f2dgzn5g")))) + "00k1fzc8y8j0ar1chq0nqyfw8bgkkjgrkm32ibn0kz2vn715nlq1")))) (build-system pyproject-build-system) (arguments - (list #:phases #~(modify-phases %standard-phases - (add-before 'check 'remove-blocking-tests - (lambda _ - ;; Remove tests require python-asdf where - ;; python-asdf require python-asdf-standard, - ;; break circular dependencies. - (for-each delete-file - (list "tests/test_manifests.py" - "tests/test_integration.py"))))))) + (list + #:test-flags + ;; Remove tests requiring python-asdf where python-asdf requires + ;; python-asdf-standard, break circular dependencies. + #~(list "--ignore=tests/test_asdf_schema.py" + "--ignore=tests/test_integration.py" + "--ignore=tests/test_manifests.py" + "--ignore=tests/test_yaml_schema.py"))) (native-inputs (list python-astropy python-jsonschema python-pypa-build From patchwork Wed Mar 20 22:27:52 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62047 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id B9F7627BBED; Wed, 20 Mar 2024 22:31:54 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 58B0827BBE2 for ; Wed, 20 Mar 2024 22:31:54 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SD-0000nF-4R; Wed, 20 Mar 2024 18:30:37 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4S9-0000hC-Cx for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:33 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4S9-0005k5-0c for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:33 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sm-0005f9-HO; Wed, 20 Mar 2024 18:31:12 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 22/49] gnu: python-asdf-transform-schemas: Update to 0.5.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.57 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:57 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:52 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf-transform-schemas): Update to 0.5.0. Change-Id: Ibf122fa98260de9a472a9c2786f85e1f1098fa19 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 8619dac066..ff45ca1434 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4337,13 +4337,13 @@ (define-public python-asdf-standard (define python-asdf-transform-schemas (package (name "python-asdf-transform-schemas") - (version "0.4.0") + (version "0.5.0") (source (origin (method url-fetch) (uri (pypi-uri "asdf_transform_schemas" version)) (sha256 - (base32 "1jlls8mirwarf8d67gaix39d8zcx1rx8fmr9qdzrbyrmxqzxqzyy")))) + (base32 "0as6dcf9dmxjh24gwdmqwbbrk56fhgsmzwi7af4llwvm4mw4rkw2")))) (build-system pyproject-build-system) (arguments ;; Dependency cycle with python-asdf From patchwork Wed Mar 20 22:27:53 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62035 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id E0DCD27BBEB; Wed, 20 Mar 2024 22:31:06 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6253D27BBE2 for ; Wed, 20 Mar 2024 22:31:06 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SL-0000sD-12; Wed, 20 Mar 2024 18:30:46 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4SA-0000jK-Jd for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:34 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4SA-0005kQ-BX for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:34 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sn-0005fT-Cs; Wed, 20 Mar 2024 18:31:13 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 23/49] gnu: python-asdf: Update to 3.1.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.58 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:28:58 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:53 +0000 Message-ID: <98b2e1358b603721f5813f7e629a00c1205edc26.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf): Update to 3.1.0. [arguments] <#:phases>: Add 'fix-test-setup phase. <#:test-arguments>: Move "-p no:legacypath" option from pyproject.toml to here. Change-Id: Ief5734d97d483d2e7af3ea59d702fd4697eb048a --- gnu/packages/astronomy.scm | 14 +++++++++++--- 1 file changed, 11 insertions(+), 3 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index ff45ca1434..57585619dc 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4254,18 +4254,26 @@ (define-public python-tweakwcs (define-public python-asdf (package (name "python-asdf") - (version "3.0.1") + (version "3.1.0") (source (origin (method url-fetch) (uri (pypi-uri "asdf" version)) (sha256 - (base32 "1jsk7b4mx04l0a08j832vnl309dba3gjnha9mbd61dzs9ridrfna")))) + (base32 "0fa6y3gmqc0y3nz0h68vq3a84pvx6gc5zp33wg8a4n9b4kipm464")))) (build-system pyproject-build-system) (arguments (list #:test-flags - #~(list "-n" "auto"))) + #~(list "-n" "auto" "-p" "no:legacypath") + #:phases + #~(modify-phases %standard-phases + ;; ImportError: Error importing plugin " no:legacypath": No module + ;; named ' no:legacypath' + (add-before 'check 'fix-tests-setup + (lambda _ + (substitute* "pyproject.toml" + ((".*:legacypath.*") ""))))))) (native-inputs (list python-fsspec python-packaging From patchwork Wed Mar 20 22:27:54 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62053 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 6E3A427BBE2; Wed, 20 Mar 2024 22:32:05 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 15E2D27BBF6 for ; Wed, 20 Mar 2024 22:32:02 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SC-0000lg-Ih; Wed, 20 Mar 2024 18:30:36 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4SA-0000jG-Ia for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:34 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4SA-0005kP-AC for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:34 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sn-0005fh-RY; Wed, 20 Mar 2024 18:31:13 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 24/49] gnu: python-asdf-coordinates-schemas: Update to 0.3.0. 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Change-Id: Iad7848823f4b6c996aeb74919cbf252014126075 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 57585619dc..9e6aec9b8c 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4369,13 +4369,13 @@ (define python-asdf-transform-schemas (define python-asdf-coordinates-schemas (package (name "python-asdf-coordinates-schemas") - (version "0.2.0") + (version "0.3.0") (source (origin (method url-fetch) (uri (pypi-uri "asdf_coordinates_schemas" version)) (sha256 - (base32 "1x6mipg76c6qldq8s2p2wpsq0cpr9b5krp62xskljdz1f84abyg3")))) + (base32 "0kk0rlzv0kkcw6fiwvps4n0x05867xc9hxyyzica31zcvhan12y9")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:27:55 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62039 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 8C7F027BBED; Wed, 20 Mar 2024 22:31:25 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 0CEF327BBE2 for ; Wed, 20 Mar 2024 22:31:25 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SQ-0000xP-Nm; Wed, 20 Mar 2024 18:30:50 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4SA-0000k7-VO for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:34 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4SA-0005ka-NQ for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:34 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4So-0005fu-7d; Wed, 20 Mar 2024 18:31:14 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 25/49] gnu: python-asdf-wcs-schemas: Update to 0.4.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.28.59 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:00 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:55 +0000 Message-ID: <9bfc4448a76ab3ddf73340be06c625703d13fa41.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf-wcs-schemas): Update to 0.4.0. [propagated-inputs]: Remove python-asdf-unit-schemas; add python-asdf-coordinates-schemas. Change-Id: I491f3f7b96b11a1ac894a30aa304d3042299de99 --- gnu/packages/astronomy.scm | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 9e6aec9b8c..c3aa9a2ad5 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4532,13 +4532,13 @@ (define-public python-asdf-astropy (define python-asdf-wcs-schemas (package (name "python-asdf-wcs-schemas") - (version "0.3.0") + (version "0.4.0") (source (origin (method url-fetch) (uri (pypi-uri "asdf_wcs_schemas" version)) (sha256 - (base32 "1r9ls2skgwq6my68nfwfah1s0q6bm2qq97s0h79vwh997jy97rai")))) + (base32 "1d08ng890xc1ilf3y1hrimx09x990wvg9g18n0ijwvpilnw49fy0")))) (build-system pyproject-build-system) (arguments (list @@ -4550,9 +4550,9 @@ (define python-asdf-wcs-schemas python-semantic-version python-setuptools-scm)) (propagated-inputs - (list python-asdf-standard - python-asdf-transform-schemas - python-asdf-unit-schemas)) + (list python-asdf-coordinates-schemas + python-asdf-standard + python-asdf-transform-schemas)) (home-page "https://github.com/asdf-format/asdf-wcs-schemas") (synopsis "ASDF WCS Schemas") (description From patchwork Wed Mar 20 22:27:56 2024 Content-Type: text/plain; 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.00 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:00 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:56 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf-astropy): Update to 0.6.0. Change-Id: I5eca1d6c113b053b8353ed43e7dfc2c7165a3139 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index c3aa9a2ad5..d580bac681 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4492,13 +4492,13 @@ (define python-asdf-unit-schemas (define-public python-asdf-astropy (package (name "python-asdf-astropy") - (version "0.5.0") + (version "0.6.0") (source (origin (method url-fetch) (uri (pypi-uri "asdf-astropy" version)) (sha256 - (base32 "061y7r1d2fqlr8a6gyaffqa3z5m0ymljahhvxzcb71355xkqig7v")))) + (base32 "0cxwknkjkgiavwmsz3vzk88c3spdi1cj4kwp62hgj92g2mh5k0zh")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:27:57 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62046 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 7B3E227BBE2; Wed, 20 Mar 2024 22:31:45 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 67DDA27BBEA for ; Wed, 20 Mar 2024 22:31:43 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SR-0000xk-1k; Wed, 20 Mar 2024 18:30:51 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4SD-0000nb-BG for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4SD-0005kx-02 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:37 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sp-0005gD-5j; Wed, 20 Mar 2024 18:31:15 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 27/49] gnu: python-pyvo: Update to 1.5.1. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.01 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:01 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:57 +0000 Message-ID: <046b8719617adc008022f635038c6271608c7864.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-pyvo): Update to 1.5.1. Change-Id: I51228822626a0fac9013580a7bfb7160980ac8fb --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index d580bac681..b3ce51c8df 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2512,13 +2512,13 @@ (define-public python-pyavm (define-public python-pyvo (package (name "python-pyvo") - (version "1.5") + (version "1.5.1") (source (origin (method url-fetch) (uri (pypi-uri "pyvo" version)) (sha256 - (base32 "1kyd4jbspldfpwwvwxfmhq2cxqp4kfbcsiyk4gjs0ib65idxdr45")))) + (base32 "0cm6agaf1gvc5bi95wx6a70ngj9vn95rx78fs59vlrmpww7q2807")))) (build-system pyproject-build-system) (native-inputs (list python-pytest-astropy python-requests-mock python-setuptools-scm)) From patchwork Wed Mar 20 22:27:58 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62042 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 5404A27BBEC; Wed, 20 Mar 2024 22:31:39 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id AA38427BBE2 for ; Wed, 20 Mar 2024 22:31:37 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SR-0000yB-Dn; Wed, 20 Mar 2024 18:30:54 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4SC-0000mE-IZ for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:36 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4SC-0005kj-5G for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:36 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sp-0005gN-Ln; Wed, 20 Mar 2024 18:31:15 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 28/49] gnu: python-astroquery: Update to 0.4.7. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.02 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:02 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:58 +0000 Message-ID: <723a2b917889f249f18648e4aaaa7d07ef7fbf81.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-astroquery): Update to 0.4.7. [arguments] <#:test-flags>: Disable one failing test. <#:phases>: Remove 'prepare-test-environment phase. Add custom 'check phase. Change-Id: I159a9d765de7f8de00c4bf226febfc90d2ba6c76 --- gnu/packages/astronomy.scm | 35 +++++++++++++++++++---------------- 1 file changed, 19 insertions(+), 16 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index b3ce51c8df..efd70f5500 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1739,34 +1739,37 @@ (define-public python-astropy-iers-data (define-public python-astroquery (package (name "python-astroquery") - (version "0.4.6") + (version "0.4.7") (source (origin (method url-fetch) (uri (pypi-uri "astroquery" version)) (sha256 - (base32 "1vhkzsqlgn3ji5by2rdf2gwklhbyzvpzb1iglalhqjkkrdaaaz1h")))) + (base32 "1jbyfhqk74wsdjxzqi0hcrgc7ha4q8cyjx96nv6w9bjg1b5vlzq4")))) (build-system pyproject-build-system) (arguments (list #:test-flags #~(list "--pyargs" "astroquery" - "-m" "not remote_data") + "-m" "not remote_data" + ;; Some tests failed with parallel run, see + ;; . + ;; "-n" "auto" + "-k" (string-append + ;; Failed: DID NOT RAISE + "not test_raises_deprecation_warning")) #:phases #~(modify-phases %standard-phases - (add-before 'check 'prepare-test-environment - (lambda _ - (setenv "HOME" (getcwd)) ; some tests need a writable home - ;; To solve pytest/conftest issue. Pytest tries to load all - ;; files with word 'test' in them. - ;; - ;; ImportError while loading conftest ... - ;; _pytest.pathlib.ImportPathMismatchError: ... - ;; - (call-with-output-file "pytest.ini" - (lambda (port) - (format port "[pytest] -python_files = test_*.py")))))))) + (replace 'check + (lambda* (#:key tests? test-flags #:allow-other-keys) + (when tests? + ;; Some tests require write access to $HOME. + (setenv "HOME" "/tmp") + ;; Step out of the source directory to avoid interference; + ;; we want to run the installed code with extensions etc. + (with-directory-excursion "/tmp" + (apply invoke "pytest" "-v" test-flags)))))))) (propagated-inputs (list python-astropy python-beautifulsoup4 From patchwork Wed Mar 20 22:27:59 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62049 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id E3A6C27BBEA; Wed, 20 Mar 2024 22:32:02 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id AF8E627BBE2 for ; Wed, 20 Mar 2024 22:32:01 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4SY-00014m-Ar; Wed, 20 Mar 2024 18:30:58 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4SD-0000na-77 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:37 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4SC-0005ks-L2 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:36 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sq-0005gY-5G; Wed, 20 Mar 2024 18:31:16 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 29/49] gnu: python-gwcs: Update to 0.21.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.02 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:02 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:27:59 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-gwcs): Update to 0.21.0. Change-Id: I3e634366c4eaf36b76dd7e3e120fb3ed0b21dcab --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index efd70f5500..d6bda35700 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4567,13 +4567,13 @@ (define python-asdf-wcs-schemas (define-public python-gwcs (package (name "python-gwcs") - (version "0.20.0") + (version "0.21.0") (source (origin (method url-fetch) (uri (pypi-uri "gwcs" version)) (sha256 - (base32 "1vhvs0mcwrw0128q9pd9v21wl173lspj5rvygqr19ljncralbx73")))) + (base32 "1fn5l4v236bl7xqi1is40c2q57dji8by98iwqcndfnmjwqf7zllc")))) (build-system pyproject-build-system) (native-inputs (list python-jsonschema From patchwork Wed Mar 20 22:28:00 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62056 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CE45D27BBED; Wed, 20 Mar 2024 22:32:09 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 67ACB27BBEC for ; Wed, 20 Mar 2024 22:32:09 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Sa-00018M-NW; Wed, 20 Mar 2024 18:31:00 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4SF-0000qU-Ie for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:41 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4SE-0005l7-4G for guix-patches@gnu.org; Wed, 20 Mar 2024 18:30:39 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Sq-0005gk-M2; Wed, 20 Mar 2024 18:31:16 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 30/49] gnu: python-drizzle: Update to 1.15.1. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.03 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:03 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:00 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-drizzle): Update to 1.15.1. Change-Id: I263ef052f61f0b6088be408b208fa31d55050429 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index d6bda35700..d4d474155a 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2087,7 +2087,7 @@ (define-public python-drms (define-public python-drizzle (package (name "python-drizzle") - (version "1.15.0") + (version "1.15.1") (source (origin (method git-fetch) ;PyPi doesn't have the test data sets @@ -2096,7 +2096,7 @@ (define-public python-drizzle (commit version))) (file-name (git-file-name name version)) (sha256 - (base32 "06qh3b60xvm5f2p09l2njwwsh0n95s54r730fyfn66w8mvr1jk82")))) + (base32 "14l3d3bx73r7cxhcl1cfh1q088qh5wq5pz5fs9dx7w79kp8mp6pg")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:28:01 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62063 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 3E8C627BBEB; Wed, 20 Mar 2024 22:32:17 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 54C5A27BBF1 for ; Wed, 20 Mar 2024 22:32:14 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TV-00025q-Qa; Wed, 20 Mar 2024 18:31:59 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4Sz-0001fv-Ri for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:26 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4Sz-0005uG-KF for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:25 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Td-0005kM-3u; Wed, 20 Mar 2024 18:32:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 31/49] gnu: python-suntime: Update to 1.3.2. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.04 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:04 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:01 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-suntime): Update to 1.3.2. Change-Id: I0af01462f3732ce9ece89a3d8bd8533563ece929 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index d4d474155a..db220857f5 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4155,13 +4155,13 @@ (define-public python-sep (define-public python-suntime (package (name "python-suntime") - (version "1.2.5") + (version "1.3.2") (source (origin (method url-fetch) (uri (pypi-uri "suntime" version)) (sha256 (base32 - "0ja64w293wjx76q3z18ikx4rdihwkbj6pnjpbs82ycyyzhfnbpz4")))) + "1kyd1r6zcs0jmh5gq74adrnb1h7dfr1mzjq4k4vbngfiga8gfd28")))) (build-system python-build-system) (propagated-inputs (list python-dateutil)) (home-page "https://github.com/SatAgro/suntime") From patchwork Wed Mar 20 22:28:02 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62073 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 97C0D27BBEC; Wed, 20 Mar 2024 22:32:26 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5379827BBE2 for ; Wed, 20 Mar 2024 22:32:26 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tk-0002eS-IX; Wed, 20 Mar 2024 18:32:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kI-28 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T1-0005ua-Fz for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:30 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Td-0005kf-PT; Wed, 20 Mar 2024 18:32:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 32/49] gnu: python-suntime: Refresh package style. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.05 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:05 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:02 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-suntime): Re-indent package. [build-system]: Swap to pyproject-build-system [description]: Concatenate small paragraphs into single one. Change-Id: I368f042eeab2f49c6f41b2ccf0c9a69c8abfec17 --- gnu/packages/astronomy.scm | 24 ++++++++++++------------ 1 file changed, 12 insertions(+), 12 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index db220857f5..2986079221 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4156,21 +4156,21 @@ (define-public python-suntime (package (name "python-suntime") (version "1.3.2") - (source (origin - (method url-fetch) - (uri (pypi-uri "suntime" version)) - (sha256 - (base32 - "1kyd1r6zcs0jmh5gq74adrnb1h7dfr1mzjq4k4vbngfiga8gfd28")))) - (build-system python-build-system) - (propagated-inputs (list python-dateutil)) + (source + (origin + (method url-fetch) + (uri (pypi-uri "suntime" version)) + (sha256 + (base32 "1kyd1r6zcs0jmh5gq74adrnb1h7dfr1mzjq4k4vbngfiga8gfd28")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-dateutil)) (home-page "https://github.com/SatAgro/suntime") (synopsis "Sunset and sunrise time calculation python library") (description - "Python library doing sunrise and sunset time calculation. - -Takes a WGS84 (GPS) latitude/longitude as input as well as an UTC or local -datetime object.") + "Python library doing sunrise and sunset time calculation. Takes a +WGS84 (GPS) latitude/longitude as input as well as an UTC or local datetime +object.") (license license:lgpl3+))) (define-public python-synphot From patchwork Wed Mar 20 22:28:03 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62065 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 130AA27BBF1; Wed, 20 Mar 2024 22:32:19 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id D068127BBE2 for ; Wed, 20 Mar 2024 22:32:16 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TZ-0002BX-8B; Wed, 20 Mar 2024 18:32:01 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kG-1L for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T2-0005ud-En for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:30 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Te-0005kv-Fu; Wed, 20 Mar 2024 18:32:06 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 33/49] gnu: python-radiospectra: Update to 0.5.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.05 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:06 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:03 +0000 Message-ID: <190308571a723c4a96060a342adb6e98d06aa392.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-radiospectra): Update to 0.5.0. Change-Id: I9146be6756530e5bda59ea53e3200ed8403fd672 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 2986079221..ec890c8928 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4670,13 +4670,13 @@ (define-public python-radio-beam (define-public python-radiospectra (package (name "python-radiospectra") - (version "0.4.0") + (version "0.5.0") (source (origin (method url-fetch) (uri (pypi-uri "radiospectra" version)) (sha256 - (base32 "0gq61ywk7li0gxwmp4hp2hc4zbrlqgn8zy0sz24qh55kn5l5gxjr")))) + (base32 "0nw71a7i875lfwbwhpc80nvwalb7iq3fynfkbngx6f6jb3v10dgs")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:28:04 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62059 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id A8CB427BBF1; Wed, 20 Mar 2024 22:32:13 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 1821127BBEB for ; Wed, 20 Mar 2024 22:32:12 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tj-0002WI-7e; Wed, 20 Mar 2024 18:32:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T9-0001l4-Ao for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:40 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0005w7-9J; Wed, 20 Mar 2024 18:31:33 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tf-0005lC-71; Wed, 20 Mar 2024 18:32:07 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 34/49] gnu: python-glymur: Update to 0.12.9. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.06 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:06 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:04 +0000 Message-ID: <6740c6ba34119392c690839209cb8b64be12e26f.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-glymur): Update to 0.12.9. Change-Id: Ifb84738df85cb6142fc5ecafa164a6dc4148a69e --- gnu/packages/python-xyz.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 763345c0c2..6d587dc017 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -1943,7 +1943,7 @@ (define-public python-gh-md-to-html (define-public python-glymur (package (name "python-glymur") - (version "0.12.8") + (version "0.12.9") (source (origin (method git-fetch) ; no tests data in PyPi package @@ -1952,7 +1952,7 @@ (define-public python-glymur (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0mfyn9j7h13242d41vg12acw55yl2mv6lmgi265hfp11k7g52b6n")))) + (base32 "0awyav7071nn9z2g4mmpg33y0y0nfandfr6nr3j5vyb8hnprcmns")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:28:05 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62057 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 3779827BBEB; Wed, 20 Mar 2024 22:32:11 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6234027BBEC for ; Wed, 20 Mar 2024 22:32:10 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TB-0001jE-58; Wed, 20 Mar 2024 18:31:42 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4Sy-0001cl-6D for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:24 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4Sx-0005tA-Uc for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:23 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Ta-0005jG-60; Wed, 20 Mar 2024 18:32:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 35/49] gnu: python-specutils: Update to 1.13.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.07 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:07 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:05 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-specutils): Update to 1.13.0. Change-Id: Ic935f471fd9f5e27745c370940e3f70f715d2ca4 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index ec890c8928..bdf65d0693 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2933,13 +2933,13 @@ (define-public python-spectral-cube (define-public python-specutils (package (name "python-specutils") - (version "1.12.0") + (version "1.13.0") (source (origin (method url-fetch) (uri (pypi-uri "specutils" version)) (sha256 - (base32 "10nq00q71cyj0p74g3kyzb4hrwkbvhsd6m5zvxifc035rfnvc2qv")))) + (base32 "0cfsigvsa0i7z2nq9ci9gxccp074kqsgr01xi2npk8xf7cjisrfq")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:28:06 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62066 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id DCBB927BBE2; Wed, 20 Mar 2024 22:32:19 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3BD3327BBEC for ; Wed, 20 Mar 2024 22:32:16 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TV-0001y8-8I; Wed, 20 Mar 2024 18:31:57 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4Sy-0001cm-8U for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:24 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4Sy-0005tB-09 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:24 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Ta-0005jQ-L7; Wed, 20 Mar 2024 18:32:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 36/49] gnu: python-stcal: Update to 1.6.1. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.08 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:08 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:06 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-stcal): Update to 1.6.1. Change-Id: Ifca867967c302234d38bbe4fa6fcd2a1d61914cf --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index bdf65d0693..431bd0346e 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -3128,13 +3128,13 @@ (define-public python-stsci-stimage (define-public python-stcal (package (name "python-stcal") - (version "1.6.0") + (version "1.6.1") (source (origin (method url-fetch) (uri (pypi-uri "stcal" version)) (sha256 - (base32 "12skkbc59alw3asvw36x7nvibx68ccfiqdlgs8b5cvdns5j47f9n")))) + (base32 "1rwvzjpidz0sfp52mqgs25599hbvxyc4gdc1yk0kdm8aynhdwi82")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:28:07 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62054 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id AF16327BBE2; Wed, 20 Mar 2024 22:32:05 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id F37F927BBF4 for ; Wed, 20 Mar 2024 22:32:01 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TT-0001x2-BL; Wed, 20 Mar 2024 18:31:56 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4Sz-0001fu-Pw for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:26 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4Sy-0005tY-Vl for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:25 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tb-0005jn-Ik; Wed, 20 Mar 2024 18:32:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 37/49] gnu: python-stcal: Enable sanity check. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.09 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:09 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:07 +0000 Message-ID: <84753bbc1e24281c235744820f53569a76919b57.1710967274.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-stcal) [arguments] <#:phases>: Revert 'sanity-check phase. Add 'silent-check-for-opencv phase. Change-Id: Ifd3ae01d261fe6dba8f5e75d4a5134510d826a57 --- gnu/packages/astronomy.scm | 9 ++++++--- 1 file changed, 6 insertions(+), 3 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 431bd0346e..4d1bbcec87 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -3140,9 +3140,12 @@ (define-public python-stcal (list #:phases #~(modify-phases %standard-phases - ;; XXX: Can't detect opencv-python version. The input opencv might - ;; not set the version correctly. - (delete 'sanity-check) + (add-before 'build 'silent-check-for-opencv + (lambda _ + ;; XXX: Can't detect opencv-python version. The input opencv + ;; might not set the version correctly. + (substitute* "pyproject.toml" + ((".*opencv-python-headless.*") "")))) (add-before 'check 'build-extensions (lambda _ ;; Cython extensions have to be built before running the tests. From patchwork Wed Mar 20 22:28:08 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62072 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 32F4927BBEB; Wed, 20 Mar 2024 22:32:26 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id C27F927BBE2 for ; Wed, 20 Mar 2024 22:32:25 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tk-0002ew-LT; Wed, 20 Mar 2024 18:32:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T4-0001jU-Bp for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:32 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T0-0005uQ-3y for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:26 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tc-0005k6-D7; Wed, 20 Mar 2024 18:32:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 38/49] gnu: python-stdatamodels: Update to 1.10.0. 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Change-Id: I69f98de3e98d22c636ec726ab3ce17f5d96fbb51 --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 4d1bbcec87..85c511bbb8 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -3174,13 +3174,13 @@ (define-public python-stcal (define-public python-stdatamodels (package (name "python-stdatamodels") - (version "1.9.1") + (version "1.10.0") (source (origin (method url-fetch) (uri (pypi-uri "stdatamodels" version)) (sha256 - (base32 "0h1v5c96c4q44b2npq9953x44dr6pwmkr1s05wfixdv95arqd8v0")))) + (base32 "00zc7z3f2fjvmms2h7176wnzjb025v0aasc6fiib9055sk34bc94")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:28:09 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62071 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id EBCB227BBEB; Wed, 20 Mar 2024 22:32:23 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 92AF027BBE2 for ; Wed, 20 Mar 2024 22:32:23 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tm-0002s3-Lb; Wed, 20 Mar 2024 18:32:14 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kF-1L for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T2-0005uc-BQ for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:30 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tf-0005lT-R4; Wed, 20 Mar 2024 18:32:07 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 39/49] gnu: python-crds: Update to 11.17.19. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.10 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:10 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:09 +0000 Message-ID: <34900c8a38c04c15979b4a7216e2d18105ecbfe9.1710967275.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-crds): Update to 11.17.19. Change-Id: I455e3d6aeb0188d13c02e1c57aa3793689c0de5c --- gnu/packages/astronomy.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 85c511bbb8..9ddbd8eb1d 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1979,13 +1979,13 @@ (define-public python-cdflib (define-public python-crds (package (name "python-crds") - (version "11.17.16") + (version "11.17.19") (source (origin (method url-fetch) (uri (pypi-uri "crds" version)) (sha256 (base32 - "0j84l7132mvwww2y83h2dgz5qw792ilp3hml4h12n7ydks0w0534")))) + "1x48yw6jnz7dw0myc86ds0qaki6v1anqaihd5qzrxwrrl61kyp6x")))) (build-system pyproject-build-system) (arguments (list From patchwork Wed Mar 20 22:28:10 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62055 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2BB7B27BBE2; Wed, 20 Mar 2024 22:32:07 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id DFF2F27BBF1 for ; Wed, 20 Mar 2024 22:32:01 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TV-000241-Lh; Wed, 20 Mar 2024 18:31:57 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kO-3x for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T4-0005uq-MH for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tg-0005lj-CC; Wed, 20 Mar 2024 18:32:08 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 40/49] gnu: python-pynbody: Update to 1.6.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.11 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:11 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:10 +0000 Message-ID: <1f76530851d9179dbb68688f977296039187cfa0.1710967275.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-pynbody): Update to 1.6.0. [arguments] <#:test-flags>: Disable more tests. Change-Id: Icfb65fccbd1e7694a64aa52caa7b905e1b9a1a87 --- gnu/packages/astronomy.scm | 20 +++++++++++++++++--- 1 file changed, 17 insertions(+), 3 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 9ddbd8eb1d..ec23671430 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -3981,7 +3981,7 @@ (define-public python-pyerfa (define-public python-pynbody (package (name "python-pynbody") - (version "1.5.2") + (version "1.6.0") (source (origin (method git-fetch) ;PyPi doesn't have not prebuit version. @@ -3990,7 +3990,7 @@ (define-public python-pynbody (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "175i99zwnnwglndr71paiadrx3xq3icxjgdqfv3xxpyn7fx4dzab")) + (base32 "00isg6nsqzgjqpkczwvrcmj3ndzav3bfzla0a72b44cgdj20wyv8")) (modules '((guix build utils))) (snippet ;; Symlink goes to not existing directory. @@ -4005,6 +4005,7 @@ (define-public python-pynbody ;; https://github.com/pynbody/pynbody/blob/ \ ;; f4bd482dc47532831b3ec115c7cb07149d61bfc5/ \ ;; .github/workflows/build-test.yaml#L41 + ;; See "--ignore=tests/copy_on_access_test.py" "--ignore=tests/gravity_test.py" "--ignore=tests/adaptahop_test.py" @@ -4027,7 +4028,20 @@ (define-public python-pynbody "--ignore=tests/sph_smooth_test.py" "--ignore=tests/subfind_test.py" "--ignore=tests/subfindhdf_gadget4_test.py" - "--ignore=tests/tipsy_test.py") + "--ignore=tests/tipsy_test.py" + "-k" + (string-append + "not test_div_curl_smoothing" + " and not test_float_kd" + " and not test_kd_delete" + " and not test_kd_issue_88" + " and not test_kdtree_from_existing_kdtree" + " and not test_kdtree_shared_mem" + " and not test_neighbour_list" + " and not test_particles_in_sphere" + " and not test_periodic_smoothing" + " and not test_smooth" + " and not test_smooth_WendlandC2")) #:phases #~(modify-phases %standard-phases (add-before 'build 'set-compiler From patchwork Wed Mar 20 22:28:11 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62070 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2A02927BBE2; Wed, 20 Mar 2024 22:32:19 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6D3A927BBF2 for ; Wed, 20 Mar 2024 22:32:14 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TZ-0002Et-Er; Wed, 20 Mar 2024 18:32:01 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kL-3X for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T3-0005ug-9x for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:30 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tg-0005lt-RN; Wed, 20 Mar 2024 18:32:08 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 41/49] gnu: Add python-asdf-zarr. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.12 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:12 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:11 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf-zarr): New variable. Change-Id: If26b31aeeb90a595a4d384755ba9060101ee4c8a --- gnu/packages/astronomy.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index ec23671430..2a4ef61159 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4509,6 +4509,31 @@ (define python-asdf-unit-schemas (description "This package provides ASDF schemas for validating unit tags.") (license license:bsd-3))) +(define-public python-asdf-zarr + (package + (name "python-asdf-zarr") + (version "0.0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "asdf_zarr" version)) + (sha256 + (base32 "0ax7c9xarh6fi2yxm1z2p90mc3d57q23a7wc8av30xg8ririrl4s")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-asdf python-fsspec python-zarr)) + (native-inputs + (list python-pytest python-semantic-version python-setuptools-scm)) + (home-page "https://github.com/asdf-format/asdf-zarr") + (synopsis "Asdf extension to support Zarr arrays") + (description + "This package includes an extension for the Python library asdf to add +support for reading and writing chunked +@url{https://zarr.readthedocs.io/en/stable/,Zarr} arrays, a file storage +format for chunked, compressed, N-dimensional arrays based on an open-source +specification.") + (license license:bsd-3))) + (define-public python-asdf-astropy (package (name "python-asdf-astropy") From patchwork Wed Mar 20 22:28:12 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62069 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 208AF27BBEA; Wed, 20 Mar 2024 22:32:22 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id A66EB27BBE2 for ; Wed, 20 Mar 2024 22:32:20 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tn-0002tK-45; Wed, 20 Mar 2024 18:32:15 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kK-2a for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T3-0005ui-NW for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:30 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Th-0005m3-8k; Wed, 20 Mar 2024 18:32:09 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 42/49] gnu: Add python-asdf-compression. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.12 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:13 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:12 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-asdf-compression): New variable. Change-Id: I221990d2f25f31dd5272a3ccc4c603da8dac353b --- gnu/packages/astronomy.scm | 44 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 2a4ef61159..7849624540 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4322,6 +4322,50 @@ (define-public python-asdf implementation of the ASDF Standard.") (license license:bsd-3))) +(define-public python-asdf-compression + ;; TODO: No release, change to tag when it's ready. + (let ((commit "57cc7e76fb4163be3e99fb740b36b5ec5ae96e49") + (revision "0")) + (package + (name "python-asdf-compression") + (version (git-version "0.0.1" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/asdf-format/asdf-compression") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1g6iiyls950k66dmd0pbqqdvz74kksc4j191n0ik6fhjnkiwifgs")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (add-before 'build 'set-version + (lambda _ + (setenv "SETUPTOOLS_SCM_PRETEND_VERSION" "0.0.1")))))) + (native-inputs + (list python-numpy + python-pytest + python-semantic-version + python-setuptools-scm)) + (propagated-inputs + (list python-asdf + python-blosc + python-lz4 + python-zstandard)) + (home-page "https://github.com/asdf-format/asdf-fits-schemas") + (synopsis "ASDF extension to support various compression algorithms") + (description + "This package includes a plugin for the Python library ASDF to add +support for reading and writing various compression algorithms including: +@url{https://www.blosc.org/python-blosc/reference.html,Blosc}, +@url{https://python-lz4.readthedocs.io/en/stable/lz4.frame.html,LZ4 Frame}, +@url{http://facebook.github.io/zstd/,Zstandard}.") + (license license:bsd-3)))) + (define-public python-asdf-standard (package (name "python-asdf-standard") From patchwork Wed Mar 20 22:28:13 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62076 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id D6A2E27BBE2; Wed, 20 Mar 2024 22:32:30 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id C5AEA27BBEA for ; Wed, 20 Mar 2024 22:32:29 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tn-0002ug-Eb; Wed, 20 Mar 2024 18:32:15 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kN-3h for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T5-0005uu-18 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Th-0005mB-Mi; Wed, 20 Mar 2024 18:32:09 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 43/49] gnu: Add python-astroplan. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.13 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:13 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:13 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-astroplan): New variable. Change-Id: Ia13998c3ccfaab57a9d0670dbd7b4e1c1b92b57a --- gnu/packages/astronomy.scm | 80 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 80 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 7849624540..a898b98515 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1736,6 +1736,86 @@ (define-public python-astropy-iers-data celestial-to-terrestrial coordinate transformations.") (license license:bsd-3))) +(define-public python-astroplan + (package + (name "python-astroplan") + (version "0.9.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "astroplan" version)) + (sha256 + (base32 "0jrgii0f11ckxvywinr9kcsljxnpnkh7hv5638wxwcb1iyjmx36r")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + #~(list "astroplan/tests" + "-k" (string-append + ;; Test requiring newer python-pytz + "not test_timezone" + ;; Disable tests requiring remote data. + " and not test_FixedTarget_from_name" + " and not test_altitude_constraint" + " and not test_at_night_basic" + " and not test_caches_shapes" + " and not test_compare_airmass_constraint_and_observer" + " and not test_compare_altitude_constraint_and_observer" + " and not test_docs_example" + " and not test_eclipses" + " and not test_eq_observer" + " and not test_event_observable" + " and not test_galactic_plane_separation" + " and not test_get_skycoord" + " and not test_hash_observer" + " and not test_is_night" + " and not test_local_time_constraint_hawaii_tz" + " and not test_local_time_constraint_utc" + " and not test_moon_illumination" + " and not test_moon_separation" + " and not test_observability_table" + " and not test_observer_lon_lat_el" + " and not test_regression_airmass_141" + " and not test_regression_shapes" + " and not test_sun_separation" + " and not test_tonight") + "--ignore=astroplan/tests/test_scheduling.py") + #:phases + #~(modify-phases %standard-phases + (add-before 'check 'prepare-test-environment + (lambda _ + (setenv "HOME" "/tmp") + (invoke "python" "setup.py" "build_ext" "--inplace")))))) + (propagated-inputs + (list python-astropy + python-astroquery + python-matplotlib + python-numpy + python-pytz + python-six)) + (native-inputs + (list python-pytest-astropy + python-pytest-mpl + python-setuptools-scm)) + (home-page "https://github.com/astropy/astroplan") + (synopsis "Observation planning package for astronomers") + (description + "This package provides a flexible toolbox for observation planning and +scheduling. When complete, the goal is to be easy for Python beginners and new +observers to to pick up, but powerful enough for observatories preparing nightly +and long-term schedules. + +Features: +@itemize +@item calculate rise/set/meridian transit times, alt/az positions for targets at +observatories anywhere on Earth +@item built-in plotting convenience functions for standard observation planning +plots (airmass, parallactic angle, sky maps) +@item determining observability of sets of targets given an arbitrary set of +constraints (i.e., altitude, airmass, moon separation/illumination, etc.) +@end itemize") + (license license:bsd-3))) + (define-public python-astroquery (package (name "python-astroquery") From patchwork Wed Mar 20 22:28:14 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62075 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id A235F27BBEB; Wed, 20 Mar 2024 22:32:29 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id D952827BBE2 for ; Wed, 20 Mar 2024 22:32:28 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tn-0002tH-2j; Wed, 20 Mar 2024 18:32:15 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kJ-2O for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T4-0005ut-Uu for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Ti-0005mX-H2 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:32:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 44/49] gnu: Add python-nose-exclude. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.14 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:14 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:14 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/check.scm (python-nose-exclude): New variable. Change-Id: I5c91b682163890c822f7d4a548e92fdd287d78a2 --- gnu/packages/check.scm | 33 ++++++++++++++++++++++++++++++++- 1 file changed, 32 insertions(+), 1 deletion(-) diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index bd1f2d1b65..9ce21b05ba 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -39,7 +39,7 @@ ;;; Copyright © 2021 Hugo Lecomte ;;; Copyright © 2022 Maxime Devos ;;; Copyright © 2022, 2023 David Elsing -;;; Copyright © 2022, 2023 Sharlatan Hellseher +;;; Copyright © 2022-2024 Sharlatan Hellseher ;;; Copyright © 2022 jgart ;;; Copyright © 2023 Luis Felipe López Acevedo ;;; Copyright © 2023 Timo Wilken @@ -2941,6 +2941,37 @@ (define-public python-rednose @command{nosetests} command of the Python Nose unit test framework.") (license license:bsd-3))) +(define-public python-nose-exclude + (package + (name "python-nose-exclude") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "nose-exclude" version)) + (sha256 + (base32 "0123x1lyv5b2p9civcfg8vilj2ga3q7p2ks1hq25z0gb3ssai3zp")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (add-before 'check 'disable-test + (lambda _ + ;; Disable failing test: AssertionError. + (substitute* '("test_dirs/build/test.py" + "test_dirs/test_not_me/test.py") + (("def test_i_should_never_run") + "def off_i_should_never_run"))))))) + (propagated-inputs + (list python-nose)) + (home-page "https://github.com/kgrandis/nose-exclude") + (synopsis "Exclude specific directories from nosetests runs") + (description + "@code{nose-exclude} is a Nose plugin that allows you to easily specify +directories to be excluded from testing.") + (license license:lgpl2.1+))) + (define-public python-nose-random (package (name "python-nose-random") From patchwork Wed Mar 20 22:28:15 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62062 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id B67B127BBEB; Wed, 20 Mar 2024 22:32:16 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 841B327BBEE for ; Wed, 20 Mar 2024 22:32:13 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4TV-00025J-Op; Wed, 20 Mar 2024 18:31:57 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T8-0001kw-GX for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0005uv-06; Wed, 20 Mar 2024 18:31:33 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Ti-0005mM-3L; Wed, 20 Mar 2024 18:32:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 45/49] gnu: Add python-ewah-bool-utils. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.15 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:15 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:15 +0000 Message-ID: <9642aea386dafc43c0e68964c3310d6cd340fe3b.1710967275.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-compression.scm (python-ewah-bool-utils): New variable. Change-Id: Ib9730d599f66bc2b864bfd305135e367f89ba9dd --- gnu/packages/python-compression.scm | 35 +++++++++++++++++++++++++++++ 1 file changed, 35 insertions(+) diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm index d076a4e161..16e9fc7a4b 100644 --- a/gnu/packages/python-compression.scm +++ b/gnu/packages/python-compression.scm @@ -196,6 +196,41 @@ (define-public python-cramjam @end itemize") (license license:expat))) +(define-public python-ewah-bool-utils + (package + (name "python-ewah-bool-utils") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ewah_bool_utils" version)) + (sha256 + (base32 "11z9vv9m19370j762z100dqhy2ndjzkxk3w9z02lzwadbyibal3h")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (add-before 'check 'build-extensions + (lambda _ + (invoke "python" "setup.py" "build_ext" "--inplace")))))) + (native-inputs + (list python-cython python-pytest)) + (propagated-inputs + (list python-numpy)) + (home-page "https://github.com/yt-project/ewah_bool_utils") + (synopsis "EWAH Bool Array compression") + (description "This package provide a Python wrapper to @acronym{EWAH, + Enhanced Word-Aligned Hybrid} compression bitarray method.") + (license (list + ;; LICENSE: for Python code. + license:bsd-3 + ;; XXX: Check if it's possible to have it as a dedicated package + ;; and link here.. + ;; ewah_bool_utils/cpp/LICENSE: for C++ bundle, sourced from + ;; . + license:asl2.0)))) + (define-public python-pybcj (package (name "python-pybcj") From patchwork Wed Mar 20 22:28:16 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62061 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id E36D027BBEC; Wed, 20 Mar 2024 22:32:15 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 4F40227BBE2 for ; Wed, 20 Mar 2024 22:32:13 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Ti-0002PF-OU; Wed, 20 Mar 2024 18:32:10 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T9-0001l5-B6 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:40 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0005wA-Rv for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:33 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Ti-0005mh-Tw; Wed, 20 Mar 2024 18:32:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 46/49] gnu: Add python-cmyt. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.15 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:15 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:16 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-cmyt): New variable. Change-Id: I45caa38fc391fe7890f87f41b18d3cfa8da07c80 --- gnu/packages/astronomy.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index a898b98515..14b2c37343 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2056,6 +2056,31 @@ (define-public python-cdflib @end itemize") (license license:expat))) +(define-public python-cmyt + (package + (name "python-cmyt") + (version "2.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "cmyt" version)) + (sha256 + (base32 "1zabmckr1z637pfqqvlkj0asfqqvx2x92163dby8x0c8yiqgdvjb")))) + (build-system pyproject-build-system) + (native-inputs + (list python-colorspacious python-pytest python-pytest-mpl)) + (propagated-inputs + (list python-matplotlib python-numpy)) + (home-page "https://yt-project.org/") + (synopsis "Matplotlib colormaps from the yt project") + (description + "This package provides a range of colormaps designed for scientific +use with Matplotlib. It includes perceptually uniform sequential colormaps such +as @code{abre}, @code{dusk}, @code{kepl}, and @code{octarine}, as well as +monochromatic sequential colormaps like @code{blue}, @code{green}, and +@code{red}, and others (@code{algae}, @code{pastel}, and @code{xray}).") + (license license:bsd-3))) + (define-public python-crds (package (name "python-crds") From patchwork Wed Mar 20 22:28:17 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62074 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 6FADF27BBEB; Wed, 20 Mar 2024 22:32:28 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id ABD4E27BBE2 for ; Wed, 20 Mar 2024 22:32:26 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tk-0002cc-4C; Wed, 20 Mar 2024 18:32:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kH-27 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T6-0005uw-67 for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tj-0005mz-OA for guix-patches@gnu.org; Wed, 20 Mar 2024 18:32:11 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 47/49] gnu: Add python-pytest-examples. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.16 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:16 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:17 +0000 Message-ID: <36d73335b3bd72c9c94bff9b29e0a0217c9e2af5.1710967275.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/check.scm (python-pytest-examples): New variable. Change-Id: I8199a7d7294c3b04134474f9f116468ac327cba8 --- gnu/packages/check.scm | 72 ++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 72 insertions(+) diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index 9ce21b05ba..fee330a1ce 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -1377,6 +1377,78 @@ (define-public python-pytest-dotenv from a .env file before running tests.") (license license:expat))) +(define-public python-pytest-examples + (package + (name "python-pytest-examples") + (version "0.0.10") + (source + (origin + ;; No tests in the PyPI tarball. + (method git-fetch) + (uri (git-reference + (url "https://github.com/pydantic/pytest-examples") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0lwxgyfj6lnkhmrvb6kzfskpwfz70kxnhnjvyl3l65k568c4wb4c")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + #~(list "-k" + (string-append + ;; Disable tests requiring pthon-ruff. + "not test_ruff" + " and not test_ruff_config" + " and not test_ruff_offset" + " and not test_ruff_ok" + " and not test_ruff_error" + " and not test_update_files" + " and not test_cases_update[simple.md]" + " and not test_cases_update[dataclass_indent.md]" + " and not test_cases_update[long_python_lines.py]" + " and not test_cases_update[simple.py]" + " and not test_cases_update[python_class.py]" + " and not test_cases_update[call_twice.md]" + " and not test_insert_print[example/README.md:3-33]" + " and not test_insert_print[example/README.md:37-40]" + " and not test_insert_print[example/README.md:44-47]" + " and not test_insert_print[example/README.md:49-66]" + " and not test_python_self[example/test_example.py:28-31]" + " and not test_python_self[example/test_example.py:40-43]" + " and not test_python_self_change_docstyle[example/test_example.py:28-31]" + " and not test_python_self_change_docstyle[example/test_example.py:40-43]")) + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'relax-requirements + (lambda _ + (substitute* "pyproject.toml" + ;; XXX: Removing ruff from required packages to pass Sanity + ;; check, add it back when it's available. + (("'ruff>=0.0.258',") "") + ;; black>=23 + ((">=23") ">22"))))))) + (propagated-inputs + ;; TODO: Add python-ruff once it has been packaged. + (list python-black python-pytest)) + (native-inputs + (list python-hatchling)) + (home-page "https://pypi.org/project/pytest-examples/") + (synopsis "Pytest plugin for testing examples in docstrings and markdown files") + (description + "Pytest-examples provides functionality for testing Python code examples +in docstrings and markdown files, with its main features being: + +@itemize +@item lint code examples using ruff and black +@item run code examples +@item run code examples and check print statements are inlined correctly in +the code +@item It can also update code examples in place to format them and insert or +update print statements +@end itemize") + (license license:expat))) + (define-public python-pytest-httpserver (package (name "python-pytest-httpserver") From patchwork Wed Mar 20 22:28:18 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62068 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CD41227BBEA; Wed, 20 Mar 2024 22:32:21 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 2E81727BBF2 for ; Wed, 20 Mar 2024 22:32:19 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tj-0002aw-OU; Wed, 20 Mar 2024 18:32:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T8-0001kv-GS for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T6-0005vY-TF; Wed, 20 Mar 2024 18:31:33 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tj-0005mq-CK; Wed, 20 Mar 2024 18:32:11 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 48/49] gnu: Add python-pydantic-settings. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.17 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:17 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:18 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-pydantic-settings): New variable. Change-Id: I410edc37f17a293f3d40ce9a2ab6416ea35bae39 --- gnu/packages/python-xyz.scm | 65 +++++++++++++++++++++++++++++++++++++ 1 file changed, 65 insertions(+) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 6d587dc017..285507971a 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -7603,6 +7603,71 @@ (define-public python-pydantic-cli Interfaces} via data models provided in the JSON format.") (license license:expat))) +(define-public python-pydantic-settings + (package + (name "python-pydantic-settings") + (version "2.2.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pydantic_settings" version)) + (sha256 + (base32 "1vf58f398ngk6wpf0jn51ghw65mjs3m03yn06h25jlsmx6jzdf80")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + #~(list "-k" (string-append + ;; Disable tests requiring python-ruff. + "not test_docs_examples[docs/index.md:24-83]" + " and not test_docs_examples[docs/index.md:113-137]" + " and not test_docs_examples[docs/index.md:148-156]" + " and not test_docs_examples[docs/index.md:173-183]" + " and not test_docs_examples[docs/index.md:193-201]" + " and not test_docs_examples[docs/index.md:212-243]" + " and not test_docs_examples[docs/index.md:286-317]" + " and not test_docs_examples[docs/index.md:331-372]" + " and not test_docs_examples[docs/index.md:430-439]" + " and not test_docs_examples[docs/index.md:453-459]" + " and not test_docs_examples[docs/index.md:514-522]" + " and not test_docs_examples[docs/index.md:547-549]" + " and not test_docs_examples[docs/index.md:553-585]" + " and not test_docs_examples[docs/index.md:620-645]" + " and not test_docs_examples[docs/index.md:654-732]" + " and not test_docs_examples[docs/index.md:738-772]")) + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'relax-requirements + (lambda _ + (substitute* "pyproject.toml" + ;; hatchling.build failed on this line with error: + ;; ValueError: Unknown classifier in field + ;; `project.classifiers`: Framework :: Pydantic :: 2 + (("'Framework :: Pydantic :: 2',") "") + ;; python-dotenv>=0.21.0 + ((">=0.21.0") ">=0.20.0")))) + (add-before 'check 'set-home + (lambda _ + ;; FileNotFoundError: [Errno 2] No such file or directory: + ;; '/homeless-shelter/ + (setenv "HOME" "/tmp")))))) + (propagated-inputs + (list python-dotenv + python-pydantic-2 + python-pyaml + python-tomli)) + (native-inputs + (list python-hatchling + python-pytest + python-pytest-examples + python-pytest-mock)) + (home-page "https://docs.pydantic.dev/latest/usage/pydantic_settings/") + (synopsis "Settings management using Pydantic") + (description + "Pydantic Settings provides optional Pydantic features for loading a +settings or config class from environment variables or secrets files.") + (license license:expat))) + (define-public python-pydoc-markdown (package (name "python-pydoc-markdown") From patchwork Wed Mar 20 22:28:19 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 62067 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CDC2327BBED; Wed, 20 Mar 2024 22:32:20 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id C0E0D27BBEA for ; Wed, 20 Mar 2024 22:32:18 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1rn4Tm-0002qj-9U; Wed, 20 Mar 2024 18:32:14 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1rn4T7-0001kM-3Y for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:38 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1rn4T6-0005vC-JD for guix-patches@gnu.org; Wed, 20 Mar 2024 18:31:32 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1rn4Tk-0005n8-4g; Wed, 20 Mar 2024 18:32:12 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#69924] [PATCH 49/49] gnu: python-hvpy: Update to 1.1.0. 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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id fm22-20020a05600c0c1600b004147266a37dsm543921wmb.30.2024.03.20.15.29.18 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 20 Mar 2024 15:29:18 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 20 Mar 2024 22:28:19 +0000 Message-ID: X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-hvpy): Update to 1.1.0. [propagated-inputs]: Remove python-pydantic; add python-pydantic-2 and python-pydantic-settings. Change-Id: Id567cff01204d2e8d71bc49ec9ffc88b2bbb3f4e --- gnu/packages/astronomy.scm | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 14b2c37343..bde29f7990 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2305,18 +2305,20 @@ (define-public python-extinction (define-public python-hvpy (package (name "python-hvpy") - (version "1.0.1") + (version "1.1.0") (source (origin (method url-fetch) (uri (pypi-uri "hvpy" version)) (sha256 - (base32 "0r0asyflz2sw9zn5vgs138nh81m0rbwbakmrncbc1ghdr3g6jahv")))) + (base32 "0bly1bgp0axxhzzf5imqsgmms41z8cxbjahxsibvb55dk94gwig6")))) (build-system pyproject-build-system) (arguments (list #:tests? #f)) ; Requires HTTP(S) access to api.beta.helioviewer.org - (propagated-inputs (list python-pydantic python-requests)) - (native-inputs (list python-pytest python-pytest-astropy)) + (propagated-inputs + (list python-pydantic-2 python-pydantic-settings python-requests)) + (native-inputs + (list python-pytest python-pytest-astropy)) (home-page "https://helioviewer.org/") (synopsis "Helioviewer Python API Wrapper") (description "@code{hvpy} is a Python API wrapper around the formal