From patchwork Tue Nov 12 19:15:29 2019 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Simon Tournier X-Patchwork-Id: 16101 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 52C4F1773A; Tue, 12 Nov 2019 19:16:23 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.0 (2014-02-07) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-1.9 required=5.0 tests=BAYES_00,FREEMAIL_FROM, T_DKIM_INVALID,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.0 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTP id 07F491773A for ; Tue, 12 Nov 2019 19:16:23 +0000 (GMT) Received: from localhost ([::1]:39090 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1iUbeI-0002sv-7U for patchwork@mira.cbaines.net; Tue, 12 Nov 2019 14:16:22 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]:46013) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1iUbe0-0002sZ-If for guix-patches@gnu.org; Tue, 12 Nov 2019 14:16:05 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1iUbdz-0004ix-5b for guix-patches@gnu.org; Tue, 12 Nov 2019 14:16:04 -0500 Received: from debbugs.gnu.org ([209.51.188.43]:49584) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1iUbdz-0004ir-2N for guix-patches@gnu.org; Tue, 12 Nov 2019 14:16:03 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1iUbdy-000827-Tw for guix-patches@gnu.org; Tue, 12 Nov 2019 14:16:02 -0500 X-Loop: help-debbugs@gnu.org Subject: [bug#38184] [PATCH] gnu: r-desolve: Move to (gnu packages cran). References: <20191112190437.30959-1-zimon.toutoune@gmail.com> In-Reply-To: <20191112190437.30959-1-zimon.toutoune@gmail.com> Resent-From: zimoun Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Tue, 12 Nov 2019 19:16:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 38184 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 38184@debbugs.gnu.org Cc: zimoun Received: via spool by 38184-submit@debbugs.gnu.org id=B38184.157358614930815 (code B ref 38184); Tue, 12 Nov 2019 19:16:02 +0000 Received: (at 38184) by debbugs.gnu.org; 12 Nov 2019 19:15:49 +0000 Received: from localhost ([127.0.0.1]:58396 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1iUbdk-00080r-Dz for submit@debbugs.gnu.org; Tue, 12 Nov 2019 14:15:48 -0500 Received: from mail-wr1-f54.google.com ([209.85.221.54]:46451) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1iUbdh-00080O-BM for 38184@debbugs.gnu.org; Tue, 12 Nov 2019 14:15:46 -0500 Received: by mail-wr1-f54.google.com with SMTP id b3so19763534wrs.13 for <38184@debbugs.gnu.org>; Tue, 12 Nov 2019 11:15:45 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:mime-version :content-transfer-encoding; bh=ywINN198rxn2yfi46q1CpKS6GNmtcx+FBauPkZAGYFo=; b=Idc+hdhXBmULwAJEJJGeUIp1yAEJmZJbRjm9FKdURXYgsdB3GQuG26BI0w+uG+7q/X JzQP5WJSHtabQUPv3qA0gHh+Wb2XmRek3SM55modhadC2UUwze7HASyc269JT8/qLouU OmbM6XCKPfkQLJbrlyDNHZvmB2a8MtDTycDI27Zki575s4Yjn3T5a5SJXzva5NtRmxdP 4T0caFUev+N+vT8gkXfdRQOQgx73XlnXgGZ5pkgHIzp2QAhmVUwN0VCxIiJulIRFsj+L xQ/+/xNkpAk0h6oD50vIF/ZTTXhDjqjoFii/OkhXUnyvSfPwv17aNF9e4XO2CMpvqGjk IrjA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:mime-version :content-transfer-encoding; bh=ywINN198rxn2yfi46q1CpKS6GNmtcx+FBauPkZAGYFo=; b=Di5GOPS3tM0bTMBrbrcuiqahQ0F33xXaF9mgnzyEh/qDMQBTunbWu5nuzh5owi20XW KFNIZFdyowxPgp6FPMreJ+7n/bDZuoaZ4AfR03+PBkPW4yaVX04+FH4iehSPntnmfgtm ViXoDzPmS9dhX5ipAPE0fbLg4wLGu47LxaPXKZY54XzDOTQ+q6oL68Ttal6dx4JbYI33 0dbZBL5cgvb8OW6n1GNAsW9kfgeIpIk4gpoIgrQJ7BUxA2RaoCGgaHTZcIPd9RTg6hFo xEJ+NtrVmStRJPu0RpzVhzDnrNq3i66vZguHK7bApHTmEKONtmOP0SKsuYlCrvjx6yCT wJrQ== X-Gm-Message-State: APjAAAUUvAFDnRrYrg9KoLqZiJt7wwwxtMcX2nTnOCIxhvFZM3q+HWmn lU1T/4aow7QxJJI4S0RDUu7GpKp0 X-Google-Smtp-Source: APXvYqzQhgIyuZZAG1I1YJ2wMwlQaaB8kQsacR6/Xlcb4m59AR15BTSrmjEMviUgdqhBix0xb1lkhQ== X-Received: by 2002:adf:9506:: with SMTP id 6mr28707257wrs.274.1573586139223; Tue, 12 Nov 2019 11:15:39 -0800 (PST) Received: from pfiuh02.univ-paris-diderot.fr ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id d13sm20254262wrq.51.2019.11.12.11.15.37 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Tue, 12 Nov 2019 11:15:37 -0800 (PST) From: zimoun Date: Tue, 12 Nov 2019 20:15:29 +0100 Message-Id: <20191112191533.32371-1-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.23.0 MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-Received-From: 209.51.188.43 X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/maths.scm (r-desolve): Move from here... * gnu/packages/cran.scm (r-desolve): ...to here. --- gnu/packages/cran.scm | 30 ++++++++++++++++++++++++++++++ gnu/packages/maths.scm | 29 ----------------------------- 2 files changed, 30 insertions(+), 29 deletions(-) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 48ddaadd8d..c62b8eb730 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -15710,3 +15710,33 @@ It solves unconstrained optimization problems using a simplex method on subspaces. The method is well suited for optimizing objective functions that are noisy or are discontinuous at the solution.") (license license:gpl3+))) + +(define-public r-desolve + (package + (name "r-desolve") + (version "1.24") + (source + (origin + (method url-fetch) + (uri (cran-uri "deSolve" version)) + (sha256 + (base32 + "0hkvspq0fp8j64l9zayab2l2nazazhwfgfym0jllh0xv5a12r99s")))) + (properties `((upstream-name . "deSolve"))) + (build-system r-build-system) + (native-inputs + `(("gfortran" ,gfortran))) + (home-page "https://desolve.r-forge.r-project.org/") + (synopsis "Solvers for initial value problems of differential equations") + (description + "This package provides functions that solve initial +value problems of a system of first-order ordinary differential equations (ODE), +of partial differential equations (PDE), of differential algebraic equations +(DAE), and of delay differential equations. The functions provide an interface +to the FORTRAN functions lsoda, lsodar, lsode, lsodes of the ODEPACK collection, +to the FORTRAN functions dvode and daspk and a C-implementation of solvers of +the Runge-Kutta family with fixed or variable time steps. The package contains +routines designed for solving ODEs resulting from 1-D, 2-D and 3-D partial +differential equations (PDE) that have been converted to ODEs by numerical +differencing.") + (license license:gpl2+))) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 77bd5d246b..80645f47b9 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -4343,35 +4343,6 @@ analysed.") (arguments '(#:configure-flags '("-DMCRL2_ENABLE_GUI_TOOLS=OFF"))))) -(define-public r-desolve - (package - (name "r-desolve") - (version "1.24") - (source - (origin - (method url-fetch) - (uri (cran-uri "deSolve" version)) - (sha256 - (base32 - "0hkvspq0fp8j64l9zayab2l2nazazhwfgfym0jllh0xv5a12r99s")))) - (properties `((upstream-name . "deSolve"))) - (build-system r-build-system) - (native-inputs - `(("gfortran" ,gfortran))) - (home-page "https://desolve.r-forge.r-project.org/") - (synopsis "Solvers for initial value problems of differential equations") - (description "This package provides functions that solve initial -value problems of a system of first-order ordinary differential equations (ODE), -of partial differential equations (PDE), of differential algebraic equations -(DAE), and of delay differential equations. The functions provide an interface -to the FORTRAN functions lsoda, lsodar, lsode, lsodes of the ODEPACK collection, -to the FORTRAN functions dvode and daspk and a C-implementation of solvers of -the Runge-Kutta family with fixed or variable time steps. The package contains -routines designed for solving ODEs resulting from 1-D, 2-D and 3-D partial -differential equations (PDE) that have been converted to ODEs by numerical -differencing.") - (license license:gpl2+))) - (define-public tcalc (package (name "tcalc")