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envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches Change-Id: I3effe7c3118a3ae447243239464cc1fe7f10e637 --- gnu/packages/bioinformatics.scm | 33 --------------------------------- 1 file changed, 33 deletions(-) base-commit: 5a806face508cdfcd91e1eb1afb3ec38c002ec92 prerequisite-patch-id: 3a59afadab83198b19921e19197e26925523b4a3 diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 4db6987763..56709c0332 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11134,39 +11134,6 @@ (define-public r-projectils states in the the context of known, reference states.") (license license:gpl3)))) -(define-public r-presto - (let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad") - (revision "0")) - (package - (name "r-presto") - (version (git-version "1.0.0" revision commit)) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/immunogenomics/presto") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 "1c3fmag4r4p2lvbvxlxyck9dvfw1prbwcl9665mmlx4a35750hk8")))) - (properties `((upstream . "presto"))) - (build-system r-build-system) - (propagated-inputs - (list r-data-table - r-deseq2 - r-dplyr - r-matrix - r-rcpp - r-rcpparmadillo - r-reshape2 - r-rlang - r-tidyr)) - (home-page "https://github.com/immunogenomics/presto") - (synopsis "Fast Functions for Differential Expression using Wilcox and AUC") - (description "This package performs a fast Wilcoxon rank sum test and -auROC analysis.") - (license license:gpl3)))) - (define-public r-sccustomize (let ((commit "397374590dae2ccc0c560897dcd1ce4382c18798") (revision "1"))