From patchwork Wed Oct 30 12:42:24 2019 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Simon Tournier X-Patchwork-Id: 15899 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id D62511768F; Wed, 30 Oct 2019 12:43:12 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.0 (2014-02-07) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-1.9 required=5.0 tests=BAYES_00,FREEMAIL_FROM, RCVD_IN_MSPIKE_H2,T_DKIM_INVALID,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.0 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTP id 99E1817676 for ; Wed, 30 Oct 2019 12:43:12 +0000 (GMT) Received: from localhost ([::1]:40102 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1iPnJf-0007SC-RC for patchwork@mira.cbaines.net; Wed, 30 Oct 2019 08:43:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:38314) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1iPnJX-0007NN-4H for guix-patches@gnu.org; Wed, 30 Oct 2019 08:43:04 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1iPnJV-0001FH-S3 for guix-patches@gnu.org; Wed, 30 Oct 2019 08:43:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:40615) by eggs.gnu.org with esmtps (TLS1.0:RSA_AES_128_CBC_SHA1:16) (Exim 4.71) (envelope-from ) id 1iPnJV-0001F7-O9 for guix-patches@gnu.org; Wed, 30 Oct 2019 08:43:01 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1iPnJV-0008QX-Jk for guix-patches@gnu.org; Wed, 30 Oct 2019 08:43:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#37988] [PATCH v2 4/6] gnu: Add r-cytolib. Resent-From: zimoun Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Wed, 30 Oct 2019 12:43:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 37988 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 37988@debbugs.gnu.org Cc: zimoun Received: via spool by 37988-submit@debbugs.gnu.org id=B37988.157243936032367 (code B ref 37988); Wed, 30 Oct 2019 12:43:01 +0000 Received: (at 37988) by debbugs.gnu.org; 30 Oct 2019 12:42:40 +0000 Received: from localhost ([127.0.0.1]:49436 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1iPnJ9-0008Py-Qk for submit@debbugs.gnu.org; Wed, 30 Oct 2019 08:42:40 -0400 Received: from mail-wm1-f51.google.com ([209.85.128.51]:33534) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1iPnJ6-0008Pk-HH for 37988@debbugs.gnu.org; Wed, 30 Oct 2019 08:42:38 -0400 Received: by mail-wm1-f51.google.com with SMTP id 6so4221931wmf.0 for <37988@debbugs.gnu.org>; Wed, 30 Oct 2019 05:42:36 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20161025; h=from:to:cc:subject:date:message-id:in-reply-to:references :mime-version:content-transfer-encoding; bh=05YbdKMNqRinI6+56YPoE7XS0VxUyqQw1xjIg6DpUl0=; b=Q254oOEBg76yzdsTUPBbZqSMA3iyj9Y6pE3E1/XiR6inezGaIiB4G3T13qCwxdQJKA lZxOOdVS5Sin7DNSngrRt9n/6c5XRm+Wn2b7dJTAfZKEZN8P594ryH7Qnomzll6RRU0u TOqP4ZodgRUdlCLDkEXFYl/TojnD/NZ/xA+D7W6CWPJQ72RRcsN3ZWDHcoK3AIQ7Mbv3 cLQm8q41J4z96pfUus+nnAPeWD5y0rk8bQE14K3eDF5HA3ctaMHYMeL2vcThi1wVUahs bDcyZuXD11jHrLAJL+adcOwmty28PL/7XjfeI/aPESaWGpRgkcWn58r5Ba9ycze0+DJ7 eFbQ== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20161025; h=x-gm-message-state:from:to:cc:subject:date:message-id:in-reply-to :references:mime-version:content-transfer-encoding; bh=05YbdKMNqRinI6+56YPoE7XS0VxUyqQw1xjIg6DpUl0=; b=n+23uaS+oJ3842GRh9yay+oZx0Garkfj4VAUjApuVHzbGcuXGHz5QDRVXKPTrNsOdg rqYq9ZY0FrQdSve1i+5ui88WYTOIJyvfqkZiHYqA7aZzf0yPNwkCvCR4bHuT2jyGa2ps QFUGv895loBTozp736fX2TJEA6bROlALaUMgO2DU6yQIWyofJgOV6hg/qMD23XKAkfy+ 0B6wv6tCUcje+ulCBJ10cCO/A1ue960DrQKGAxEuvzovco/NWoHY9AibqSyMvB/BCgQC 3RutLpgTeIgo0xD1r/4YQGYeZPQ34kax3PLQcurtxsDYAWzRrCHvojrYpQXZI37sk2lp 4OQg== X-Gm-Message-State: APjAAAUq2+2eaOT0NTODrcOnO+QHXKpcJ/q/lIbHYK5/595SUAnknLJV WzvEBpbi9RxaS+egAxIzV+xPuYvL X-Google-Smtp-Source: APXvYqyc+l22Zxpnemsqxa6h1iPQd0hE8WDp4djTek6uaY1WqXeKy+FuZD6+aTkpoe8P5dbl5epIrQ== X-Received: by 2002:a1c:9d4a:: with SMTP id g71mr9296380wme.66.1572439350380; Wed, 30 Oct 2019 05:42:30 -0700 (PDT) Received: from pfiuh02.univ-paris-diderot.fr ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id s21sm136732wrb.31.2019.10.30.05.42.29 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Wed, 30 Oct 2019 05:42:29 -0700 (PDT) From: zimoun Date: Wed, 30 Oct 2019 13:42:24 +0100 Message-Id: <20191030124224.29391-1-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.23.0 In-Reply-To: <87zhhifok6.fsf@elephly.net> References: <87zhhifok6.fsf@elephly.net> MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.2.x-3.x [generic] X-Received-From: 209.51.188.43 X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioconductor.scm (r-cytolib): New variable. --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 7c1761852c..00b10918ff 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6205,3 +6205,26 @@ data.") (description "This package provides the headers and static library of Protocol buffers 2.6.0 for other R packages to compile and link against.") (license license:bsd-3))) + +(define-public r-cytolib + (package + (name "r-cytolib") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "cytolib" version)) + (sha256 + (base32 + "10sdkwrmzmp3sh59hl3x0zxwlw77v80jnv8gz1qrv66skjb764cq")))) + (properties + `((upstream-name . "cytolib"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bh" ,r-bh) + ("r-rprotobuflib" ,r-rprotobuflib))) + (home-page "https://bioconductor.org/packages/cytolib") + (synopsis "Infrastructure for working with gated cytometry data") + (description "This package provides the core data structure and API to +represent and interact with gated cytometry data.") + (license license:artistic2.0)))