From patchwork Sat Nov 4 15:05:56 2023 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Felix Gruber X-Patchwork-Id: 55927 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 59DB927BBEA; Sat, 4 Nov 2023 15:07:40 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id A1ACF27BBE2 for ; Sat, 4 Nov 2023 15:07:39 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1qzIFG-0001IO-8e; Sat, 04 Nov 2023 11:07:30 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qzIFF-0001ID-57 for guix-patches@gnu.org; Sat, 04 Nov 2023 11:07:29 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1qzIFE-0007gm-TD; Sat, 04 Nov 2023 11:07:28 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1qzIFl-0005Qh-Ux; Sat, 04 Nov 2023 11:08:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#66930] [PATCH] gnu: Add python-pyamg. Resent-From: Felix Gruber Original-Sender: "Debbugs-submit" Resent-CC: lars@6xq.net, marius@gnu.org, me@bonfacemunyoki.com, jgart@dismail.de, guix-patches@gnu.org Resent-Date: Sat, 04 Nov 2023 15:08:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 66930 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 66930@debbugs.gnu.org Cc: Felix Gruber , Lars-Dominik Braun , Marius Bakke , Munyoki Kilyungi , jgart X-Debbugs-Original-To: guix-patches@gnu.org X-Debbugs-Original-Xcc: Lars-Dominik Braun , Marius Bakke , Munyoki Kilyungi , jgart Received: via spool by submit@debbugs.gnu.org id=B.169911046020804 (code B ref -1); Sat, 04 Nov 2023 15:08:01 +0000 Received: (at submit) by debbugs.gnu.org; 4 Nov 2023 15:07:40 +0000 Received: from localhost ([127.0.0.1]:35570 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qzIFP-0005PU-KG for submit@debbugs.gnu.org; Sat, 04 Nov 2023 11:07:39 -0400 Received: from lists.gnu.org ([2001:470:142::17]:58914) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qzIFN-0005PH-Bz for submit@debbugs.gnu.org; Sat, 04 Nov 2023 11:07:37 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qzIEh-0000nu-MQ for guix-patches@gnu.org; Sat, 04 Nov 2023 11:06:55 -0400 Received: from mout02.posteo.de ([185.67.36.66]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qzIEf-0007af-In for guix-patches@gnu.org; Sat, 04 Nov 2023 11:06:55 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 19345240104 for ; Sat, 4 Nov 2023 16:06:52 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1699110412; bh=mD26G2Xrqr+caql1qCjCXsSWiP0S2vxG4dcJLKxkob4=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=nv+cKOb+QmqW+1xsfaO+ZaLJIS2W4EsqfvFqHGCsKKTEhsLrTjyPBpFf4/2bF51+8 leFJDiYCZ76Rdn/qCoVkNn7+W7TBDwL9wMBWUjMQOGve1hKILwy2rpAxyeMeS8K4WG Ze97F5Nn1/MtXCcorniD91AfqEG0VPxP/cDc7uFuSS/h3EKGUMHd1Jn3snMVQZYjVM icdVgnwLRh/vNeQJ+13GWS1Vy3YatLUVehdLli+YXoy9Q3ZoY2CyKAWwZRPATvkKp1 JHQ1N/AEHvJkwZ/TuL+XPAi90zhMNxiP18OnijqTLTgICHJL5k1cooUx3bowu4cuQi 5NhjDtoLON+7w== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4SN1DC4n2hz6tvJ; Sat, 4 Nov 2023 16:06:51 +0100 (CET) From: Felix Gruber Date: Sat, 4 Nov 2023 15:05:56 +0000 Message-ID: <39e96e5e211c0a24b03057c4387cc791f2e23e86.1699110356.git.felgru@posteo.net> MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.66; envelope-from=felgru@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, RCVD_IN_MSPIKE_H5=0.001, RCVD_IN_MSPIKE_WL=0.001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-pyamg): New variable. Change-Id: Ibf39fecd14d4e6fd72078b217737e5e5cbbf2321 --- gnu/packages/python-science.scm | 36 +++++++++++++++++++++++++++++++++ 1 file changed, 36 insertions(+) base-commit: 9dcd8802f5bc472579f23a38dcf437f8a9ac976c diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 4063797a30..1c2edda118 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -387,6 +387,42 @@ (define-public python-trimesh library.") (license license:expat))) +(define-public python-pyamg + (package + (name "python-pyamg") + (version "5.0.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "pyamg" version)) + (sha256 + (base32 + "0bm0cbqcj5zgs4k7djs5ga98pb95raxxdd674g744hv1iwi6gfga")))) + (build-system pyproject-build-system) + (propagated-inputs (list pybind11 python-numpy python-scipy)) + (native-inputs (list python-setuptools-scm python-pytest)) + (arguments + (list + #:test-flags + ;; Test installed package in order to find C++ modules. + #~(list "--pyargs" "pyamg.tests"))) + (home-page "https://github.com/pyamg/pyamg") + (synopsis "Algebraic Multigrid Solvers in Python") + (description "PyAMG is a Python library of Algebraic Multigrid +(AMG) solvers. + +PyAMG features implementations of: +@itemize +@item Ruge-Stuben (RS) or Classical AMG +@item AMG based on Smoothed Aggregation (SA) +@item Adaptive Smoothed Aggregation (αSA) +@item Compatible Relaxation (CR) +@item Krylov methods such as CG, GMRES, FGMRES, BiCGStab, MINRES, etc. +@end itemize +PyAMG is primarily written in Python with supporting C++ code for +performance critical operations. +") + (license license:expat))) + (define-public python-tspex (package (name "python-tspex")