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(license license:expat))) +(define-public python-rseqc + (package + (name "python-rseqc") + (version "5.0.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "RSeQC" version)) + (sha256 + (base32 + "106av4ms6agrfjdlw5j3fsrk86clr0f4ygysv19g66l6hj3laz9w")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-bx-python python-numpy python-pybigwig + python-pysam)) + (native-inputs (list python-cython python-nose)) + (home-page "https://github.com/MonashBioinformaticsPlatform/RSeQC") + (synopsis "RNA-seq quality control packag") + (description + "Useful modules that can comprehensively evaluate high throughput sequence data. +Some basic modules quickly inspect sequence, quality, nucleotide composition bias, +PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, +mapped reads distribution, coverage uniformity, strand specificity, transcript level +RNA integrity and etc.") + (license license:gpl3))) + (define-public python-twobitreader (package (name "python-twobitreader")