From patchwork Sat Mar 29 23:00:54 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40978 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CCFE527BBE9; Sat, 29 Mar 2025 23:02:44 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 7AA8A27BBE2 for ; Sat, 29 Mar 2025 23:02:43 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfBn-0001vK-WE; Sat, 29 Mar 2025 19:02:08 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfBk-0001uk-15 for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:04 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfBi-0003Hk-Gm for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:02 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=Np3QqML+Pbk5UeWcTkaM0P5JfVFUlg6Tx1NKfsT9gFc=; b=WaDOzfosFo9SskYoOQyUYlP5dJIPzAeLoQu2yW2ziMq5i0Q0YbYBOb8KEGRyCBb4RYuncgf63q8eBx1g9kViMx5+20qnQS4HMZxRLPB7hIxJHA0sRBYtGLpgLplvU85sKiIBTyARIIUJVAG7DAq5Tib20+ZlhdzaW3qIJh/4k4YgGnXX7z+Is9ANy4Np0I5RKHdnCV1EFAmXjKheKlYvSKMxqnDr72ssRODWJWwDiU8V7xu31PF7JWNc6XmEOnZn5REn+vd1zq6Hkn9fn6BsqaJpogYVd+nc8vgni10o11lHmGZipwonzqfDeewivAtwLv87qqbku8OE0Np4VU7JBg==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfBi-0006XX-CI for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 01/12] gnu: python-scikit-build-core: Update to 0.11.1. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:02:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328929225012 (code B ref 77371); Sat, 29 Mar 2025 23:02:02 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:01:32 +0000 Received: from localhost ([127.0.0.1]:33347 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBD-0006VM-QL for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:32 -0400 Received: from mout01.posteo.de ([185.67.36.65]:38683) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBC-0006V2-10 for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:30 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 904D2240027 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:23 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289283; bh=u+AloEH3TaC8yl1a+3MCWm1qE4ZmkNz1/8JZ6FbmPlw=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=GIUJsLl77FOlkPDRz5uIMHv5JBoxla3Swl5D/+1zSa/PGs2wBBEwJIvIg3N+PtylY 8slZxdnFciaJzzXEf0QjOxHFhzSS+BO+m2VtTraheRjUjPUG5EgRmGwcQvUqvENmsI /dTdSMYqYOzO1dVfDyc+qkJ2YVMOX7dzaysdmQXmuLaAwOK86ns1v9WZT4fIIvG5yl GGUZFj8PNuKshquYnhc8jRePui4jZZgWbAsVYU5MU6ochatoRPiqRACWqZcS3Oz0pk kYIaS4DI+RxhoWlHDlOFC6AUc+XWsSDUmaO+q0fhaxeaHubeP2nYZknhWyX2twrlJb GcywlSfI03CZA== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCYt2pmvz6txm; Sun, 30 Mar 2025 00:01:21 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:00:54 +0000 Message-ID: In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-scikit-build-core): Update to 0.11.1. Change-Id: I66d04ba5ed89d3a9eb57df1e9491b8170d5b1571 --- gnu/packages/python-science.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 247ec44629..2471c43d26 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -598,13 +598,13 @@ (define-public python-scikit-allel (define-public python-scikit-build-core (package (name "python-scikit-build-core") - (version "0.10.7") + (version "0.11.1") (source (origin (method url-fetch) (uri (pypi-uri "scikit_build_core" version)) (sha256 - (base32 "1y64d8rl39banfwdkszyd4sbzp795q8lj66yxrz2l84mwygvbjq4")))) + (base32 "1dvjmrhhc3549yrdh8dwr61h7xcrr9ijddv7k7dhngykbkgqhnaf")))) (build-system pyproject-build-system) ;; Tests are aborted with the admonition: "setup.py install is ;; deprecated. Use build and pip and other standards-based tools." From patchwork Sat Mar 29 23:00:55 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40976 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id D6CCF27BBE9; Sat, 29 Mar 2025 23:02:33 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 274E827BBE2 for ; Sat, 29 Mar 2025 23:02:32 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfBp-0001vm-7B; Sat, 29 Mar 2025 19:02:10 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfBk-0001uw-Pa for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:05 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfBi-0003Hl-Vj for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:03 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=l1X9IcFU53hA8y2bM2lxAQ689OY2AkuRw4tSbQJdykQ=; b=B2Z1MpGyFQW6E+ULXpV/2/pFihm47uUBR5vWGAAupQZILSHzbywZIlWvlDMR5Va0GWVnLDYEpGt5VZxhkoBLSNpuSjATuc2ddMVlxfaSqWuSIpMXUAozP0ijF4nknFdiTgK3VG8lscPGEwnwYmPegTZhnBwxBocMAa7X3QIpvjRQeKjx3oydYqOz78VCTKKOzsEUN1s45euzZdbSsKd933BubKIp8FrIBeBt2317fN8oyS6m4taTwhBMB3ul0ILnST3YizMU9dK3QziCFMUR1Ium/RmUEQKRtEsIPD1UWUmzlQHhLCTahvOj0mkeRQcMdou7DUZd1Hk7hHaaZ8J8lg==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfBi-0006Xe-QY for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 02/12] gnu: Add python-resample. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:02:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328929925034 (code B ref 77371); Sat, 29 Mar 2025 23:02:02 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:01:39 +0000 Received: from localhost ([127.0.0.1]:33351 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBL-0006Vg-Ch for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:39 -0400 Received: from mout01.posteo.de ([185.67.36.65]:54005) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBG-0006VA-KW for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:35 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id B80B9240027 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:27 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289288; bh=RcZc8hW3PjH0C/1c9lYbVSDjhCWDbtq31/1PmvJBCFQ=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=IGJj6O0uwXZVlf9mSxEqObr0W5mnhhRT0KY7oQopTcdgnSSzi2QTNyahxIanH5pWk b6vr8fW8Wkuknli/36t89JU19ye55X8gh37H+cw8X8tEu5MXJdjTNDxL2acECOWhAq O5vEKMM43M86DvRt2HJCtvGndN7WZPdG+kuSxJXSIP7/FZtg6J8ih32HdHAZPO9iNI ejSWaAXRnz/Aec2JD2A18ION3wU1RfI1trXCBThFWxDdnFpjeQJFtvAWnmkmgb7XK3 aJ4aUCEbXJTpAJEUGE+zPHr1QGRmewGrhMkFf+l89A4nQwp0CEVhs/jPPA/aTFiHVG kqChjalVyLhbQ== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCYz08QDz9rxB; Sun, 30 Mar 2025 00:01:26 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:00:55 +0000 Message-ID: <1248d8d6d7d9219eff44126c4aa09a9cb32d3887.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/statistics.scm (python-resample): New variable. Change-Id: I0bd8ed6c0532c5dba6efd9d15b056da401072fcf --- gnu/packages/statistics.scm | 33 +++++++++++++++++++++++++++++++++ 1 file changed, 33 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 55b726c66b..48542130a8 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -2813,6 +2813,39 @@ (define-public python-openturns functionalities needed to treat uncertainties in studies.") (license license:lgpl3+))) +(define-public python-resample + (package + (name "python-resample") + (version "1.10.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "resample" version)) + (sha256 + (base32 "08hbnkfplhyh1pc9ls20pldxslhsp3azb8ibgc4wjg5q801pid2b")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-numpy python-scipy)) + (native-inputs (list python-pytest python-setuptools python-wheel)) + (home-page "https://github.com/scikit-hep/resample") + (synopsis "Resampling-based inference in Python") + (description "This package provides a resampling-based inference based on +data resampling and permutation. + +Features: + +@itemize +@item Bootstrap resampling: ordinary or balanced with optional stratification +@item Extended bootstrap resampling: also varies sample size +@item Parametric resampling: Gaussian, Poisson, gamma, etc.) +@item Jackknife estimates of bias and variance of any estimator +@item Compute bootstrap confidence intervals (percentile or BCa) for any +estimator +@item Permutation-based variants of traditional statistical tests (USP test of +independence and others) +@item Tools for working with empirical distributions (CDF, quantile, etc.) +@end itemize") + (license license:bsd-3))) + (define-public r-coda (package (name "r-coda") From patchwork Sat Mar 29 23:00:56 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40979 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id DE08B27BBEA; Sat, 29 Mar 2025 23:02:47 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6A70427BBE2 for ; Sat, 29 Mar 2025 23:02:47 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfBx-0001yO-UA; Sat, 29 Mar 2025 19:02:17 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfBl-0001v2-CU for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:05 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfBj-0003Hm-Ck for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:03 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=wwVv1RiyDZklCgIOWoPOdzlB4HvaO78sdxHSL5oL5K0=; b=sp0eAk7r8k1qntymQqyD1eqiN0taBtiFFz2enEJuz07bbKSW/UHUfSkH6P5sOIlDrBCEHDh4PQwO+sUzEH6HFfzF22kk+CJBOt/YeL+mTT32SfJWecrSb1BGgOw5wpikrRbBxeW6BWESEz+FhAk9aU+rrBiVpu/EDreZU1C0JVDMGxtWmFjt+Swk9fARP9ihPBpg5YIDxbcirudEtwbmEAmspLT0uXyw8t906Fhu/Ttcf5EwcgixyiBAx2cU/FrmgUt34e6dMxrjLInnWJNgIWKjgY7wnQhZdQwAKrkmLF1XqWosN3wSncYtSdSDIBhSucqlSNzspUGDkfrJR+SfuQ==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfBj-0006Xm-8A for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 03/12] gnu: Add python-boost-histogram. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:02:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328930625060 (code B ref 77371); Sat, 29 Mar 2025 23:02:03 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:01:46 +0000 Received: from localhost ([127.0.0.1]:33357 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBR-0006W6-S8 for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:46 -0400 Received: from mout02.posteo.de ([185.67.36.66]:46529) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBL-0006VU-Ic for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:41 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 60D54240101 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:32 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289293; bh=ACNMLgg1svCsyoaLMqQZ1Yk9OYEOu/THWERxxVaZyto=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=iXt+ol73GbTxXOEnopHFsVUGZIjvyY/52tPUy84mN2ECmeZXd5yP5jfLXY3Tn6LLL sVlftd1jibC7nIUdBYp7mraTJoU3xvwuFI8WEaXMNGpooSGd/AROXr9Ignpz6t0h5W Bo7S6csRz4/U/mY0SrTUuqwG/oz1Z8NjkI9MA6hJT6ZytGc/roDLXPxokk/cY+mECY 9t4sCyV3h6fL0lae3BACCZ4E+GopsG0rf8Ck1ODhocUEHQ5HEaw2dKYPHQ7ZIaZ8yq 8LqNa6VmlkWTzfy6a6OrpDAvlYDJyEOsIgdZ+MFPTKqKfju5zOVfs6MyLtYjfrvBq2 fNJ1mIRPWSxNQ== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZ30FFBz6twM; Sun, 30 Mar 2025 00:01:30 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:00:56 +0000 Message-ID: <444b3b2594652986ab1b8a7459db6c9ddb184fc2.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-boost-histogram): New variable. Change-Id: I91e73a0a3e3a698197b2d309bd5bdf388fd2697a --- gnu/packages/python-science.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 2471c43d26..8d245f34e1 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -816,6 +816,33 @@ (define-public python-scikit-misc and scientific computing.") (license license:bsd-3))) +(define-public python-boost-histogram + (package + (name "python-boost-histogram") + (version "1.5.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "boost_histogram" version)) + (sha256 + (base32 "0p2f90p5jwlwrjz3hq2fzaifkmny33g2mpi89nnhi3w41f1jxr2i")))) + (build-system pyproject-build-system) + ;; This package bundles files from Boost::Histogram and doesn't provide + ;; a way to use a system library. + (propagated-inputs (list python-numpy)) + (native-inputs (list cmake-minimal + pybind11-2.13 + python-pytest + python-pytest-benchmark + python-scikit-build-core + python-setuptools-scm)) + (home-page "https://boost-histogram.readthedocs.io/en/latest/") + (synopsis "Python bindings for the Boost::Histogram library") + (description + "This package provides Python bindings for the Boost::Histogram library, +one of the fastest libraries for histogramming.") + (license license:bsd-3))) + (define-public python-scikit-opt (package (name "python-scikit-opt") From patchwork Sat Mar 29 23:00:57 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40977 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 6E71E27BBEA; Sat, 29 Mar 2025 23:02:39 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 2919527BBE2 for ; Sat, 29 Mar 2025 23:02:39 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfBs-0001xD-Uo; Sat, 29 Mar 2025 19:02:12 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfBm-0001vH-8V for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:06 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfBj-0003Ho-RR for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:04 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=LYE3VF4kJ5IrMqe4QycaAcNvqrWXGZebAuIx93NlXlw=; b=iJ9HUHYvFjbFmC1vixun0pwqtmTR8MLBGjkTtXK5e1XxE7CUyz+kTUMoQ1/1ll6AKkCMCSzIvYetJB1tOmjSS13naQTp/wLDcaK2kPwvmjobpSS5Ij2qOiqe523VluLLK9HHGgI0qHWvUvIkz961akkHGaAhLt+sYgYfe/ZxzZyNPCOdR1rzL6iHoZwgv0ijb3tCRPO3P52Zx//eYPGbtruFy5dC/L3sBNJfryZ8TQqU2nyQq6tBNQYPVbXZulbKBnjybTtw8+AHrT/8HwaJmbgilLnMIKQgKVXIS+n4scvqRE0zK2ogicJ4YfS9L9RreOZvXKvO01nhDhC0kFPY4A==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfBj-0006Xt-MI for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 04/12] gnu: Add python-deflate. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:02:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328930725072 (code B ref 77371); Sat, 29 Mar 2025 23:02:03 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:01:47 +0000 Received: from localhost ([127.0.0.1]:33361 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBS-0006W9-8m for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:47 -0400 Received: from mout02.posteo.de ([185.67.36.66]:58393) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBO-0006Vd-0B for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:42 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 22FE2240101 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:36 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289296; bh=UcpOrdf/pGmLGRCB9frrv58eIufkWpokxcf1qRNu2/0=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version:Content-Type: Content-Transfer-Encoding:From; b=n/rE8tTRgvY6y/Ouqny593IWjMMjtSRNf/kSqWZDOSSMjjGrar1m+XNjcGYm1kMvG 2+FOpJJ4TsHZkCZQSW8JIxzM4ZihquGGYguCp6UKxcsX4YiUaOUpShhiwITKeJUJGf os1fRrupAKcXNJB4k8YLumNq0E50276G633AGX1P73nJyqOFoKaYKpHAbRoTmE8kxC 2m7dCWQNoAPeQ+UqAAbjfwg8ME5rqBOssJnnF7odqw+DgLxnk84iWRLER79ZMLbDji YUrxIRkkYWAgCYkeaAAzaSbpaD6ypT+1LTwFR7VjcMqhwouBysctm93F5rW/A5zVt4 DJzefY4mjA74A== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZ71bWdz9rxB; Sun, 30 Mar 2025 00:01:34 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:00:57 +0000 Message-ID: <693d2ab0e55bbf3964c13499f7dd3830101276bd.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-compression.scm (python-deflate): New variable. Change-Id: I7b04deb2ed291cff1e36422b8e4bf127a0575d08 --- gnu/packages/python-compression.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm index 5b994d408f..427d3a7464 100644 --- a/gnu/packages/python-compression.scm +++ b/gnu/packages/python-compression.scm @@ -11,6 +11,7 @@ ;;; Copyright © 2024 TakeV ;;; Copyright © 2023 Ivan Vilata i Balaguer ;;; Copyright © 2024 Maxim Cournoyer +;;; Copyright © 2025 Vinicius Monego ;;; ;;; This file is part of GNU Guix. ;;; @@ -788,6 +789,32 @@ (define-public python-zipp wrapper. It provides a backport of the @code{Path} object.") (license license:expat))) +(define-public python-deflate + (package + (name "python-deflate") + (version "0.7.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "deflate" version)) + (sha256 + (base32 "1vnwyzlq5q73g6qj6gcl95ma1zxdx875zkc1n5aiyy8jjvzyxdfh")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases #~(modify-phases %standard-phases + (add-after 'unpack 'libdeflate-prefix + (lambda _ + (setenv "LIBDEFLATE_PREFIX" + #$(this-package-input "libdeflate"))))))) + (native-inputs (list cmake-minimal python-pytest python-scikit-build-core)) + (inputs (list libdeflate)) + (home-page "https://github.com/dcwatson/deflate") + (synopsis "Python wrapper for @code{libdeflate}") + (description "This packages contains a very thin Python wrapper for +@code{libdeflate}.") + (license license:expat))) + (define-public python-zipstream-ng (package (name "python-zipstream-ng") From patchwork Sat Mar 29 23:00:58 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40974 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 9411727BBEA; Sat, 29 Mar 2025 23:02:19 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3826D27BBE2 for ; Sat, 29 Mar 2025 23:02:19 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfBr-0001wh-8y; Sat, 29 Mar 2025 19:02:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfBm-0001vO-Ps for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:07 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfBk-0003Hu-Fi for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:05 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=G4HJIMgSEksBzykRiuUo+lN97XnxWy/n+4O3kKZqAKE=; b=du3LJ5nEtjWKoXGBKbPVi0aM+YrBzrwybFurpp2CXvA/pm4UOdru5Lz9UN0lMOvo7GHzv31q0UjzvR9j8fIMbQojouyDf1gx76s56Z6h8w/yeaxXkqy43zidA2qFsq3I5XPh+sNH2So8cnJ+N+uxYliNn6gGGa8a7W2hBfsACXVZs3aG3uxYngW7XhNr5jTQh1UShL1/r8BqA+jdc29JYI6dpt4CiSoAMxUxFdRXhcNuToaqocPDOMYyVzOLj0K6hxuQntHZ1URMPbSYZKRHWPu0j8L3zY8FJDHDmlv0Hy/P/8MvxNBNcaZ+enl8CE3zXh1i0lramxmy1TPn/Jv1hA==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfBk-0006Y7-B4 for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 05/12] gnu: Add python-uhi. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:02:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328931925111 (code B ref 77371); Sat, 29 Mar 2025 23:02:04 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:01:59 +0000 Received: from localhost ([127.0.0.1]:33367 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBf-0006Wv-6a for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:59 -0400 Received: from mout02.posteo.de ([185.67.36.66]:38231) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBR-0006Vp-Uv for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:46 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 344B9240101 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:40 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289300; bh=E9FLWUWIiiBOdzDF3BztcD35yMotC/nghddGgJaGCFc=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=Uqp95cA6KD3N/2ar8EFHS3k2I8yBJoyTWXk8KQNO1CAb7B6PuYu2ER16ReiZbO3gq MYeR86SI5F7Ipt6yvAefckiJ4bSmbxsqWrHfcrZ8AmfdQbfYwl0nW915ZqnCXUMCGJ Y7Dw8eJQcTVAolzvhir1XYVDo5q5B9B7sBoSBGAWjoemZVCtavxI19duXAmOJADWVI lE6akwCmGUgeOGTTJx4+3R/Ym3Q/cGk3wcVS0oWFf5M+P/sycX/IQM13QlBW8saqEJ 3mSTA3zilLHFcdBSzVxIKpxRL/SBJYysFLb3lPjG0S2DwlyA42PaOBi/lLO85PgDC7 KbHeRowB2acug== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZC1VBpz6twM; Sun, 30 Mar 2025 00:01:38 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:00:58 +0000 Message-ID: <564bd3d1e97214d179d1a7499e2104d0f252847f.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-uhi): New variable. Change-Id: I12e802cfc9dd6473cac9657dc477e470238f1bbc --- gnu/packages/python-science.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 8d245f34e1..ced52c4b51 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1002,6 +1002,33 @@ (define-public python-scikit-survival cross-validation.") (license license:gpl3+)))) +(define-public python-uhi + (package + (name "python-uhi") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "uhi" version)) + (sha256 + (base32 "0753b7yw0zi06g4azafnk3w8i3q6js9i6wwg3pya464gygrbnncm")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-numpy)) + (native-inputs (list python-boost-histogram + python-fastjsonschema + python-hatch-vcs + python-hatchling + python-pytest)) + (home-page "https://github.com/scikit-hep/uhi") + (synopsis "Universal Histogram Interface") + (description "This is a package meant primarily for documenting histogram +indexing and the PlottableHistogram Protocol and any future cross-library +standards. It also contains the code for the PlottableHistogram Protocol, to +be used in type checking libraries wanting to conform to the protocol. It is +not usually a runtime dependency, but only a type checking, testing, and/or +docs dependency in support of other libraries.") + (license license:bsd-3))) + (define-public python-tdda (package (name "python-tdda") From patchwork Sat Mar 29 23:00:59 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40975 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 5548F27BBEA; Sat, 29 Mar 2025 23:02:26 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 0D85D27BBE9 for ; Sat, 29 Mar 2025 23:02:26 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfBz-0001yv-2i; Sat, 29 Mar 2025 19:02:19 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfBn-0001vP-2G for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:07 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfBl-0003I3-0d for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:05 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=ViJ4xMA/xmgFICoDGKpDqNFDVj0wSbEsCmIjgRNqpfI=; b=D0h6rwrqYqOTiuklo4/tzHvhL1o35UwnsQxD9ICw7QciBkB/G3CSbI9mdVhko5Vys+Q7VS1M7a2Ew9C1fbBmeEyBQgswvReomkCLAcoqf7Iq+LbsU7RpSFB58JC4UM2Tx3QvjwZ/L7UPgCvH8GuStAj/EF7eo4sax1oU7OB5dAFH8Ec2o407VLIhHCQGOqfMupGlf8DXeQydukP0MINAiaqcHp96va4HXgE17OY5W70kz7xEkEDOPGObeyNX/c01mttTcxTyqVUGhDp9vSWSwquYK6+Y6is1qPl7GtUTs0J0nT68ptHBnn3XO/m7OgdHKmmG29q0BSTR7vWYsNou7g==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfBk-0006YE-SV for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 06/12] gnu: Add python-histoprint. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:02:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328932025118 (code B ref 77371); Sat, 29 Mar 2025 23:02:04 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:02:00 +0000 Received: from localhost ([127.0.0.1]:33369 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBf-0006Wy-K8 for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:59 -0400 Received: from mout02.posteo.de ([185.67.36.66]:57195) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBW-0006W4-J7 for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:50 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id D676E240101 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:44 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289304; bh=O25/3QyaEJ6XI7iNaw22RMXKpQFvIrP16yjnFRr5/7o=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=KvPb/Jzy7YmLMbzJ66tBUQlZt/gpnXtp2TgS45COaQd5cnQP/CGz/CpkVxkUOWnjT vECtMzK7TxGmqZxn3gf2DIAr+lw9q89ieF9zIit8URvoQV/2smIXezjhlvvTz0IM2S sSDKOQw3vyZCP8cMnbRy0b4gLA2qFV+WKLAnRHLz7Z5FRHTVX0zoG4XHfx8SKAFDDj 5XbVmL+Hh4fOTbOaUnvn1Md+Tp8AuiluoG01PtNW1cABjEVWVtd1SoBnH0EUGqP4Us t7g1sqVZzz6Z5gdEQdRrqJFS1T2BLJeoB9qc3bZgp6CX1ysZV5OQ6Is/olTHuDEazI TNGsohZ9GARCw== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZH6c81z9rxQ; Sun, 30 Mar 2025 00:01:43 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:00:59 +0000 Message-ID: <915ecba3500c8ea84685d0b0a950d101b3887bd2.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-histoprint): New variable. Change-Id: I1ace11116c39e2c803afd10849c107c3f232273e --- gnu/packages/python-science.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index ced52c4b51..24e1fca1d3 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1029,6 +1029,30 @@ (define-public python-uhi docs dependency in support of other libraries.") (license license:bsd-3))) +(define-public python-histoprint + (package + (name "python-histoprint") + (version "2.6.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "histoprint" version)) + (sha256 + (base32 "07d2lk64gwhjvw4wccvwks3j4ig7g99q627jjxz4ans5a29p5pz1")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-click python-numpy python-uhi)) + (native-inputs (list python-awkward + python-boost-histogram + python-hatch-vcs + python-hatchling + python-pytest + python-rich)) + (home-page "https://github.com/scikit-hep/histoprint") + (synopsis "Pretty print histograms to the console") + (description "Histoprint uses a mix of terminal color codes and Unicode +trickery (i.e. combining characters) to plot overlaying histograms.") + (license license:bsd-3))) + (define-public python-tdda (package (name "python-tdda") From patchwork Sat Mar 29 23:01:00 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40980 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2A4EF27BBEA; Sat, 29 Mar 2025 23:02:55 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id DEBF527BBE2 for ; Sat, 29 Mar 2025 23:02:54 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfBt-0001xS-7Z; Sat, 29 Mar 2025 19:02:15 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfBn-0001vS-Ax for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:07 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfBl-0003I8-El for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:06 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=84Az0SoNgF42ste6447tavZO0sg10N6+OC1R2SWO2iA=; b=N+ozXMtAUNLCAv+rMTc5Y02Akae689qr9a6nPGa9FnXR5CJDRmfdc6BZXi5fcI2v7DfVIqTaAU7mAyY1BhMCIGYRj0EwCI+Olu3SviqOOgewiwktV2xgMn5MeQm/C5zb4Tpfk1H/RIgy7IA8ltL02Kah9xZ/dZZc1QiUmMSoudn7ZSLKNPZB1Fjt5ucmrK2RFQ80/WVQHHZ6zC8jtqDUgsMLhmGkdARpzPng9Swq+MAuHMxAifTpEUmPKrzHFN9s1B05EknaPpEZBVBtPTV7cpyAzKLGUK3cynbLAOdh7diE0+E1g83FYHYLxviQUNPj6/uSrPr7aGimcedfU5ygZg==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfBl-0006YM-9t for guix-patches@gnu.org; Sat, 29 Mar 2025 19:02:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 07/12] gnu: Add python-hist. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:02:05 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328932025125 (code B ref 77371); Sat, 29 Mar 2025 23:02:05 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:02:00 +0000 Received: from localhost ([127.0.0.1]:33371 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBg-0006X5-01 for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:00 -0400 Received: from mout01.posteo.de ([185.67.36.65]:56291) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBa-0006WV-Rm for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:01:55 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 20B02240027 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:49 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289309; bh=v5ND+FugmK0MrUdi6u7FyUK0XzhnO2tfkjf7j9VrBk8=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=Y0b+gLI8zJ5y8N7iOmbUbKHGWPv3KbQg4UwCZ28hsElvJYat/cNXAfiTJViqIxIVW mj72CRc143YUKt09pKx2NKu/7qT96c48NpO7AGU211DnfCyqo0SQXXT3AdkCWUMk0S hbMiY+lgV91Dj+TQTCOIx3M3gL8M8oiHYz02dC3WLHQyLSD4owVNXT4DGlfqp6yzHN PuR5yLdIart8hwQiDCGFBEWMw4igMIlvJtC8/uQ1/Ejmlp0rUeO5u1tsYbGaEhetxM sg4jHC49A1jTDdjQAbKW6hPnKvjAQk+WiY/Tm4AMKdg0qCDKxYPAbB1u7JsNxJGboT ufBKwAISl60Bg== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZN1bldz6tx2; Sun, 30 Mar 2025 00:01:47 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:01:00 +0000 Message-ID: <0cb93208bdaf3456378d1e03e7b57ec04f179c58.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-hist): New variable. Change-Id: Ia3495b6d94a620b797318ffce162aa1d58e79049 --- gnu/packages/python-science.scm | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 24e1fca1d3..c1fabfa7bd 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1053,6 +1053,31 @@ (define-public python-histoprint trickery (i.e. combining characters) to plot overlaying histograms.") (license license:bsd-3))) +(define-public python-hist + (package + (name "python-hist") + (version "2.8.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "hist" version)) + (sha256 + (base32 "17cd46c0ixq18fr2kgzam09w1sr4qkd9l6nsjdbl4vggw80ck9vx")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-boost-histogram + python-histoprint + python-numpy + python-typing-extensions)) + (native-inputs (list python-hatch-vcs + python-hatchling + python-pytest + python-pytest-mpl)) + (home-page "https://hist.readthedocs.io/en/latest/") + (synopsis "Hist classes and utilities") + (description + "Hist is an analyst-friendly front-end for @code{boost-histogram}.") + (license license:bsd-3))) + (define-public python-tdda (package (name "python-tdda") From patchwork Sat Mar 29 23:01:01 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40982 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 980D127BBEA; Sat, 29 Mar 2025 23:03:24 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3311027BBE9 for ; Sat, 29 Mar 2025 23:03:24 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfCh-0002R2-RV; Sat, 29 Mar 2025 19:03:03 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfCg-0002Q2-6X for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:02 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfCf-0003QG-TG for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:01 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=KoNZ1LY8SSweEmbJ2o2zOiEofjs81eHT7MGjqrftonw=; b=LaLsc1BYHvPXuPFtYtt2xCVUxueZH5wDxp3+1Q/pdjii5JTlt0wKP0qImzeGW1d+cE86Ctx6JWebb41ZAeuwwMv6HXQDPpC2oi8d7CMQ76/A1LqKYtIVSJ4XCw3oRAJDx39SU3qtvSlnER3tXyDhu44iQu6ko34vlbZHBGrRXV9hphKJC5tbG7Oe1nFzEgqP8YoQfIMDTU4ebhadSTBEuSfgOx/05A79Sla5922PRftF3qkXd29mwyK/mF9NjZ1rpH3g3n1z6UyCcGt7BI36q/qYOJruSC3F9bVDv8KwL4bD0Ksz49Yj0ya2QQJQ2647jj4TiiGZYm9ro2zkmHwHaA==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfCf-0006az-Oq for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 08/12] gnu: Add python-hepunits. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:03:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328933825243 (code B ref 77371); Sat, 29 Mar 2025 23:03:01 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:02:18 +0000 Received: from localhost ([127.0.0.1]:33390 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBx-0006Z4-R4 for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:18 -0400 Received: from mout01.posteo.de ([185.67.36.65]:55391) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBg-0006Wl-Vc for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:01 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 59C3C240027 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:53 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289313; bh=CjrEN58XDPV/0UfLoAni1wtcy1lDjymW6RtT7yL+meI=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=brUi/x38PBRDVtuNM/xRRxa1+QWrDd64/05WcZLQlrhqKDfmME//1O4MB+xCChop9 reYjOfDOirVWMJE+jykbMk49clUlNPdKNy4UWdWj3m9NAs4IZs3Z3JaEF2gvL4t3yV dMBB4bAS+CJvyci9qXJBGMxmlNK3Yvwyu9AuAZX1kqRSAJLvxCAG+7BCY/ihcqdsxj WlI/x2OVY2TTL2c9Va1UQsFTjBu/xbVsfYLopE4zmBlvsIxl7NicNI3L/v4a/kWgyQ FeMVgp4t+mhIs0Ok+G/yIYFHkC+zukyj673uvQB+aBD+DuhQK8AS+QNj0NyUI5uPy0 w6+aheW/HMG5g== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZS3nTsz9rxF; Sun, 30 Mar 2025 00:01:52 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:01:01 +0000 Message-ID: <333047db64aeee783ec837a96b33acd92c81c67a.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-hepunits): New variable. Change-Id: I174495c4fdacd21491e9e7d5abdd7d5dd0e5ffe8 --- gnu/packages/python-science.scm | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index c1fabfa7bd..876c68912a 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1124,6 +1124,25 @@ (define-public python-tdda of regular expressions from text data and automatic test generation.") (license license:expat))) ; MIT License +(define-public python-hepunits + (package + (name "python-hepunits") + (version "2.3.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "hepunits" version)) + (sha256 + (base32 "1n1nf2rz2d86qzjmcwykbc16jzsqb45vs8lyksg98b3jd8nwsd4l")))) + (build-system pyproject-build-system) + (native-inputs (list python-hatch-vcs python-hatchling python-pytest)) + (home-page "https://github.com/scikit-hep/hepunits") + (synopsis "Units and constants in the HEP system of units") + (description "@code{hepunits} collects the most commonly used units and +constants in the HEP System of Units, as derived from the basic units +originally defined by the CLHEP project.") + (license license:bsd-3))) + (define-public python-trimesh (package (name "python-trimesh") From patchwork Sat Mar 29 23:01:02 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40981 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 83B3927BBE9; Sat, 29 Mar 2025 23:03:14 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 8EA4C27BBE2 for ; Sat, 29 Mar 2025 23:03:13 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfCi-0002RO-Di; Sat, 29 Mar 2025 19:03:04 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfCg-0002QB-Ku for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:02 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfCg-0003QP-C0 for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:02 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=Nz2z8HviCn3ei+x77BwnWIsz/o0zZqFX4coUG37Dz+E=; b=LI7lmqS652cBTL/CDEZZkoYPJ0MnKiZYEowoMw6yBS4d2QVnmwh/vqjOnHqw/IcH2bcUjCPkq9UGoqrN0iN/GA1g/f6EXwA3szTOn4sjZHtnwlM2kdNwTTojaX1NQMf1Ktptyt81uQRtTvNEJAtSAKQ5J8sO4tn1MvQZeBoBtaU4VUTS8JrCWYYvOMe2ZYg4ViTm/NRm/eo3d+HgZpzgAq0zQJooBA/n3w6G9oKx+awss/SYMMYD6NZke/BFnPPwAVrP6gyEwJYQ/+q/BXrhg9wBQss4+7bHPEFo2GNmk+DMXmmjJ94DG3vylCmOt1GHhMNFDw07eEFJbrRmurt6hw==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfCg-0006b7-7O for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 09/12] gnu: Add python-particle. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:03:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328933925251 (code B ref 77371); Sat, 29 Mar 2025 23:03:02 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:02:19 +0000 Received: from localhost ([127.0.0.1]:33392 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBy-0006Z7-73 for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:18 -0400 Received: from mout01.posteo.de ([185.67.36.65]:48511) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBj-0006Wt-IJ for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:04 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 42D71240027 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:01:57 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289317; bh=Aio7kjr4pVdqwpmgdLsbRcg+kDYBLwk2ez0rIKoLtfc=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=Uz8UjCD0QJtYzEaK+hprBoBCoxxaxd9LkjVK0/jNsADaaR+kiqkE3yFyXscdePRrd jWKlvKHbkJnqaBgP9UVgWAoN7yPzboCrGFDQ2It9PzLwwyHNTEUt1wEM0QDQQp7gUJ h+JppbPTLEQa9fLJexR5KK7/ChHNYIbJ289KshNMmKZfgqU4tsup36Nbl8PncgpEWH zlpnjz9/tWnkB/oFwa33/hE59xQmPr5utlnwfWiTS7xEjJI9FNtM74L2CWS0PsOZaD /Ngp7849uhh/wf4KpgugdZ+D+/imq7ucPVHTaHqbZdhY6c4r7V+V2YNF1y5RB/3oyo +UQ+b3lFpTo1A== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZX2gKjz6tx2; Sun, 30 Mar 2025 00:01:56 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:01:02 +0000 Message-ID: In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-particle): New variable. Change-Id: Ib2462e25aadba797532c005a3b4d4e4a238a611e --- gnu/packages/python-science.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 876c68912a..b17c543619 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1143,6 +1143,34 @@ (define-public python-hepunits originally defined by the CLHEP project.") (license license:bsd-3))) +(define-public python-particle + (package + (name "python-particle") + (version "0.25.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "particle" version)) + (sha256 + (base32 "1sb19sdng47ymh10r8b553xf8p0cqfs7j9qblh4fzsmz73pbp90z")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-attrs + python-hepunits + python-typing-extensions)) + (native-inputs (list python-hatch-vcs + python-hatchling + python-pandas + python-pytest + python-pytest-benchmark + python-tabulate)) + (home-page "https://github.com/scikit-hep/particle") + (synopsis "Extended PDG particle data and MC identification codes") + (description + "@code{Particle} provides a pythonic interface to the Particle Data Group +(PDG) particle data tables and particle identification codes, with extended +particle information and extra goodies.") + (license license:bsd-3))) + (define-public python-trimesh (package (name "python-trimesh") From patchwork Sat Mar 29 23:01:03 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40983 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 327A327BBEB; Sat, 29 Mar 2025 23:03:25 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id B6EC027BBE9 for ; Sat, 29 Mar 2025 23:03:24 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfCj-0002Rz-4M; Sat, 29 Mar 2025 19:03:05 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfCh-0002QV-5j for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:03 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfCg-0003QV-QD for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:02 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=TcxPLc8hhNNCO8nm47VgHrQ+Ng7Qb+aDVv9VAgI18sc=; b=Z7ewRcgwfe20uEwxxjhqHyPdG0id6/2q+rP5F4GMOsk4AxcfNQ83TCaiVqcOy3SbXQ5rj3BUwRL3C3M9XA7oe/dZvlMoAhdKz6A65wAy6W5+U7eYFIrjiaJiR++Ryw5hSMJ3Ll9kusJpAajF6qWqtRrMMMCjeai+kiyYh/YBqonhAus2MPWHaacLLX33m2XP9koTsvdKfs0/E3QGZdegZu0N7GfSle76oOZWd2dfj8Cv5f8Gh+i5JETLPpk6+HAedy7VIusXe3Pv4mt8cV0b2fqjUe4CfAbsIMBMUVvxkv4LAx0cfs/A7HA2cOVROcZeml6CU423P4OiaAN9iPUTvw==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfCg-0006bE-Lm for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 10/12] gnu: Add python-decaylanguage. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:03:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328933925258 (code B ref 77371); Sat, 29 Mar 2025 23:03:02 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:02:19 +0000 Received: from localhost ([127.0.0.1]:33394 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBy-0006ZE-Ts for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:19 -0400 Received: from mout01.posteo.de ([185.67.36.65]:46531) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBn-0006XO-2S for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:07 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 4D3C9240028 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:02:01 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289321; bh=dv+SulpbouqQITv4n+N6kSNcBgRxbbFRTM06Cmtg0PQ=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=djVYqWjlXqPqO3BCCqyDR6yGlBZtQNRwgkU4X1H/pl8AS2eEsCl0XDCTQ6d2229nV vBqJdsY8BJgX0KrtatNljDloX/xwd5SDkpVVrPSfllID00mUX9jnoN4iQZROgLF3gu 8THmAl+ObaVDC2u6ruqe2h7y+qseSK//+tc6pKPFF0BWT1druCnyxDWe1nyW90obT4 Q0yatlIFj1weriXtHdzZe3+q1d/nmLnc2VTXlVtbWqVdsWic8Ti2vBxUahAUsflKiN 9uQw1ywvVwuDmgktCey+WwGNlU77oSZ2RJnK+OiAGLRQANcXAg5yBCP0cIY4FQAr7e rMP8NVPDrwMxQ== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZc2DfKz9rxB; Sun, 30 Mar 2025 00:01:59 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:01:03 +0000 Message-ID: In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-decaylanguage): New variable. Change-Id: I5c709016f80b19cef22105bff42ca62b8f384f1b --- gnu/packages/python-science.scm | 36 +++++++++++++++++++++++++++++++++ 1 file changed, 36 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index b17c543619..c2f23c8d55 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -61,6 +61,7 @@ (define-module (gnu packages python-science) #:use-module (gnu packages digest) #:use-module (gnu packages gcc) #:use-module (gnu packages geo) + #:use-module (gnu packages graphviz) #:use-module (gnu packages image) #:use-module (gnu packages image-processing) #:use-module (gnu packages machine-learning) @@ -1171,6 +1172,41 @@ (define-public python-particle particle information and extra goodies.") (license license:bsd-3))) +(define-public python-decaylanguage + (package + (name "python-decaylanguage") + (version "0.18.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "decaylanguage" version)) + (sha256 + (base32 "0kc9i9k51kg2zv8dwywpigiipxzmyxpzb101imjsvv1licip7b8v")))) + (build-system pyproject-build-system) + (arguments + (list + ;; This file fails to be collected with "DeprecationWarning: setDaemon() + ;; is deprecated, set the daemon attribute instead". + #:test-flags #~(list "--ignore" "tests/test_convert.py"))) + (propagated-inputs (list python-attrs + python-graphviz + python-hepunits + python-lark-parser + python-numpy + python-pandas + python-particle + python-plumbum)) + (native-inputs (list python-hatch-vcs + python-hatchling + python-pytest)) + (home-page "https://decaylanguage.readthedocs.io/en/latest/") + (synopsis "Language to describe, manipulate and convert particle decays") + (description "DecayLanguage implements a language to describe and convert +particle decays between digital representations, effectively making it +possible to interoperate several fitting programs. Particular interest is +given to programs dedicated to amplitude analyses.") + (license license:bsd-3))) + (define-public python-trimesh (package (name "python-trimesh") From patchwork Sat Mar 29 23:01:04 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40984 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id A91CB27BBEC; Sat, 29 Mar 2025 23:03:38 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5EF0E27BBE2 for ; Sat, 29 Mar 2025 23:03:38 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfCj-0002Sb-Tf; Sat, 29 Mar 2025 19:03:05 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfCh-0002Qz-Lu for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:03 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfCh-0003Qb-Aa for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:03 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=DH0q8z8s8ZeRijaQjWEUlGb8PpEbJtqo4/TWLgAhYb0=; b=YEs3Y6UopNLCpBcBXd7m6BvEM76O4g8QlnISNnopxTqU0M5iJvAdPcDqjJmNODbf+H8v3EQbr2d9raaU2JqAc6l5joOdjSdf92+tXuXFUwew1fwl0OpG4Gn8Z/FQyt7cgyR1Hw66ij61I3EAyIE7QJUZ2s3Nn3V4+HdMoQ4jLug9R5QVT+CbtATenDmqT+nfOwfSuLtnQhIUgDX+L2O6xkeGKiNrw6BHPOLVQ+9T+DfsJz1T4/z4B4RNVNXEtuW1am1rVX4f1yDHwn8Tw0JU7MaYrg7ALFdArMjM9/aMbp3H7rF6WR5vmu4E88nIiC51snZmNWXP5Zid9M2t00SgyA==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfCh-0006bO-6D for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 11/12] gnu: Add python-vector. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:03:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328933925266 (code B ref 77371); Sat, 29 Mar 2025 23:03:03 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:02:19 +0000 Received: from localhost ([127.0.0.1]:33396 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBz-0006ZL-Cy for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:19 -0400 Received: from mout01.posteo.de ([185.67.36.65]:45897) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBr-0006Yd-E7 for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:11 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 9E992240028 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:02:05 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289325; bh=LZm5phxRlyIAsUETcl+9OFtV8bRfT1aoWMUv6JXidHA=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=LwwxnzOjWjiMgDyNZ4JWRTOcd0IO6h0Up8L86oUO4dBBGkx40KgjhexxdlAAQYCVD 0dyL47C8XB+8Q/3jkljJyLlmlJYkc+B7JOX2KaOTPA72mE3WF1nCyFRfskEi/mWyxb 739tIc9ykTL9PIY7SiZRDaJ/t1Ba8UeuWllWa3ChOir+NpMxF0X0TyuX6jRRVKXiJ4 VsQz9suWrtj9ktJIqG+AfmWc2G+PBVt59NZN9eKFZ1G3df8Y3Qvv2SvK9/aoIQevnY vMEBaOOfgqNUVw/RRIgk62HNtsW7BX85kTUgIoaIlQUxPCv+oTnv16I95Qne9NQyj/ nohD81sj+vlTg== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZh56Bhz6twR; Sun, 30 Mar 2025 00:02:04 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:01:04 +0000 Message-ID: In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-vector): New variable. Change-Id: I77d72b0c18a0bc215cb2198ce5447e587b13d0fe --- gnu/packages/python-science.scm | 29 +++++++++++++++++++++++++++++ 1 file changed, 29 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index c2f23c8d55..41504b457e 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1207,6 +1207,35 @@ (define-public python-decaylanguage given to programs dedicated to amplitude analyses.") (license license:bsd-3))) +(define-public python-vector + (package + (name "python-vector") + (version "1.6.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "vector" version)) + (sha256 + (base32 "1r6ncbdnak75nvyhn9rkmgg08l6ggxyvb5ikqrv5zlskwl62v62r")))) + (build-system pyproject-build-system) + (arguments + (list + ;; This file requires python-papermill (not yet packaged). + #:test-flags #~(list "--ignore" "tests/test_notebooks.py"))) + (propagated-inputs (list python-numpy python-packaging)) + (native-inputs (list python-awkward + python-hatch-vcs + python-hatchling + python-pytest + python-sympy)) + (home-page "https://github.com/scikit-hep/vector") + (synopsis "Arrays of 2D, 3D, and Lorentz vectors") + (description "Vector is a Python library for 2D and 3D spatial vectors, as +well as 4D space-time vectors. It is especially intended for performing +geometric calculations on arrays of vectors, rather than one vector at a time +in a Python @code{for} loop.") + (license license:bsd-3))) + (define-public python-trimesh (package (name "python-trimesh") From patchwork Sat Mar 29 23:01:05 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Vinicius Monego X-Patchwork-Id: 40985 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 4863A27BBE2; Sat, 29 Mar 2025 23:03:39 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.6 required=5.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,MAILING_LIST_MULTI,RCVD_IN_DNSWL_BLOCKED, RCVD_IN_VALIDITY_CERTIFIED,RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id A064D27BBEA for ; Sat, 29 Mar 2025 23:03:38 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1tyfCj-0002SY-K1; Sat, 29 Mar 2025 19:03:05 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1tyfCi-0002RB-36 for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:04 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1tyfCh-0003Qk-QW for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:03 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=SnlQlkIDbEMNxvbDhwguCn/ilrnl6XbKHUfV/fcSwpg=; b=LQVrdbbiKjANXG1Vr4Pgik/lR5LdbGzEVYlSQlOErPcrGiqjvdPu5OUrsAVY3WcDLjs3/npLW4A5ETkag7aAlI3LoQ+N45NHDfZjdmxH8L7465X1bTzyWt7P9vX99uLubuC4J76zZ8Ab3NCZs7IDrOO/7ZRWC54n5hE8tN9n5KwjBpMGSZk5cT64L3+7NCFNS0Y/pzQuex2eCDC/WuRK6dROWqEiRNnGC4NuHSoHUbsYs67w1E6VgZxOguQe3WE87FTZtBhCJdhc8Xg2vBa+0fqXnpLRXJifJLvQb32WqtCAYHMLC7eIJCKTBONRiqJ+iuyQLp1Hg9f2CHKxccArhg==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1tyfCh-0006bW-Md for guix-patches@gnu.org; Sat, 29 Mar 2025 19:03:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#77371] [PATCH 12/12] gnu: Add python-hepstats. Resent-From: Vinicius Monego Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 29 Mar 2025 23:03:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 77371 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 77371@debbugs.gnu.org Cc: Vinicius Monego Received: via spool by 77371-submit@debbugs.gnu.org id=B77371.174328934025272 (code B ref 77371); Sat, 29 Mar 2025 23:03:03 +0000 Received: (at 77371) by debbugs.gnu.org; 29 Mar 2025 23:02:20 +0000 Received: from localhost ([127.0.0.1]:33398 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1tyfBz-0006ZT-QE for submit@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:20 -0400 Received: from mout02.posteo.de ([185.67.36.66]:38259) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from ) id 1tyfBw-0006Yn-7Z for 77371@debbugs.gnu.org; Sat, 29 Mar 2025 19:02:16 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 484C4240101 for <77371@debbugs.gnu.org>; Sun, 30 Mar 2025 00:02:10 +0100 (CET) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1743289330; bh=4S873vh+QUcUMLp3DpBB38eRawb11H8qbBkP68Q6FbE=; h=From:To:Cc:Subject:Date:Message-ID:MIME-Version: Content-Transfer-Encoding:From; b=lUVvMRtHDpK+DI3KklqmyOMGStrxi8gO/0p6hS67sWG/DJ6oS+48T7V6rDnBvIiWS xadhfz/uimU4oo2Ie3urjjE7/iuPfD0xGPNqWybIKMIfaDNdxI0wTMJJWPeZ9qoiyH 7Efm+XVc8iX7z/2EmxAkYydIYRrZxA2EyL6LJ2soycXnbn8le/viU2CUrXQgOzaa71 QEuH62/1AdGRLMPxjW/WY7UGBSl8cu9n/X3hxlKlAAGm7D1RytXtqIPFQwJBm7/wk+ tFY5NlcmSBGjy0pjvCg9mn15GS2dRWfZ0LseCsqSIp7biN6kH3eDSuhPn1EG+Q9Yys DnVLQzXEShP1A== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4ZQCZn1hfxz9rxF; Sun, 30 Mar 2025 00:02:08 +0100 (CET) From: Vinicius Monego Date: Sat, 29 Mar 2025 23:01:05 +0000 Message-ID: <8950455c7584af53ca3bce26383f950356a8511e.1743288280.git.monego@posteo.net> In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-hepstats): New variable. Change-Id: I0fc06ac9cde4443d2ec973f25985b5161d4ee33c --- gnu/packages/python-science.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 41504b457e..ca684fbadc 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -46,6 +46,7 @@ (define-module (gnu packages python-science) #:use-module ((guix licenses) #:prefix license:) #:use-module (gnu packages) + #:use-module (gnu packages astronomy) #:use-module (gnu packages base) #:use-module (gnu packages bioinformatics) #:use-module (gnu packages boost) @@ -1236,6 +1237,33 @@ (define-public python-vector in a Python @code{for} loop.") (license license:bsd-3))) +(define-public python-hepstats + (package + (name "python-hepstats") + (version "0.9.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "hepstats" version)) + (sha256 + (base32 "1rvvc3r83p41c5mpsy5l02r97zrylamgm1gmxs988csysiqri4ng")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-asdf + python-numpy + python-pandas + python-scipy + python-tqdm + python-uhi)) + (native-inputs (list python-hatch-vcs + python-hatchling + python-pytest + python-pytest-runner)) + (home-page "https://github.com/scikit-hep/hepstats") + (synopsis "Statistics tools and utilities") + (description "@code{hepstats} is a library for statistical inference +aiming to cover the needs of High Energy Physics.") + (license license:bsd-3))) + (define-public python-trimesh (package (name "python-trimesh")