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Resent-From: Navid Afkhami Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 09 Feb 2023 08:11:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 61381 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 61381@debbugs.gnu.org X-Debbugs-Original-To: Received: via spool by submit@debbugs.gnu.org id=B.167593022729407 (code B ref -1); Thu, 09 Feb 2023 08:11:01 +0000 Received: (at submit) by debbugs.gnu.org; 9 Feb 2023 08:10:27 +0000 Received: from localhost ([127.0.0.1]:57348 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pQ20h-0007eF-2j for submit@debbugs.gnu.org; Thu, 09 Feb 2023 03:10:27 -0500 Received: from lists.gnu.org ([209.51.188.17]:58160) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pQ20c-0007e3-4Y for submit@debbugs.gnu.org; Thu, 09 Feb 2023 03:10:25 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1pQ20b-00059L-Dw for guix-patches@gnu.org; Thu, 09 Feb 2023 03:10:21 -0500 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1pQ20Z-0000RH-BF for guix-patches@gnu.org; Thu, 09 Feb 2023 03:10:21 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :x-mailer:message-id:date:date:subject:subject:from:from :received; s=mdc; t=1675930205; x=1677744606; bh=1fIFdMqGsgrl59A UJ19ymdM2A5ED6YMl5LZ6my8WZX0=; b=oZNLmFs7EkRvr1G+fPsbi+Bvk8mExld +pZpnmqiIXkg2ZOh1XLQh6BsR/ueoMLxKQlj/xYK0hcLzA7VB/ujPd+L0VmWeref Q3JWWqhKpxHuX8FLUKpdOWT53SHQDQuvuMX+mLKhFhascEkyFJEQMmihw+r1nj3a toR4qMxYy6RE= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id C8BB4A00E5 for ; Thu, 9 Feb 2023 09:10:05 +0100 (CET) Received: from localhost.localdomain (10.84.128.29) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.17; Thu, 9 Feb 2023 09:10:05 +0100 From: Navid Afkhami Date: Thu, 9 Feb 2023 09:09:38 +0100 Message-ID: <20230209080938.30022-1-navid.afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.34.1 MIME-Version: 1.0 X-Originating-IP: [10.84.128.29] X-ClientProxiedBy: SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27436.006 X-TM-AS-Result: No-10--0.085900-5.000000 X-TMASE-MatchedRID: MRc8tpsXpWsB90FcL1q4MBF4zyLyne+ATJDl9FKHbrn0alA+huUQ+fTr oULd1hBffS0Ip2eEHnwj/1Rbkzl1E95/HgWYxplM5MIx11wv+CPKayT/BQTiGr5NB27sub1+Eby BHXiRZi3HFO3mwjjVtO6hcRIctcghOk11tHoHU+GdDW/Xyk21wx7z09unySDQKzzRRq9EF0VYT/ G3apbsk1GUUIpynVDhtOdWe/Uk/vuwZO9kmaWWvP8+E8vSQCkfySOb56URxsg= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--0.085900-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27436.006 X-TM-SNTS-SMTP: 668B31E852CBAAFDD979B16BC68D6F305B6B525DA849F20705AD8C9C361FA9232002:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b. --- gnu/packages/bioinformatics.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 78979eea0d..155ce81083 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2836,7 +2836,7 @@ (define-public tetoolkit (string-append "'" (search-input-file inputs "bin/sort") " ")) (("'rm -f ") (string-append "'" (search-input-file inputs "bin/rm") " -f ")) - (("'Rscript'") +` (("'Rscript'") (string-append "'" (search-input-file inputs "bin/Rscript") "'"))) (substitute* "TEToolkit/IO/ReadInputs.py"