From patchwork Sat Jul 23 21:20:01 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 40885 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 6C69F27BBEA; Sat, 23 Jul 2022 22:21:10 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id E52D127BBE9 for ; Sat, 23 Jul 2022 22:21:09 +0100 (BST) Received: from localhost ([::1]:43066 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1oFMYf-0005iT-3f for patchwork@mira.cbaines.net; Sat, 23 Jul 2022 17:21:09 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:44976) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1oFMYY-0005iL-Bg for guix-patches@gnu.org; Sat, 23 Jul 2022 17:21:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:56720) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1oFMYY-0004Gv-3P for guix-patches@gnu.org; Sat, 23 Jul 2022 17:21:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1oFMYX-0003nw-RI for guix-patches@gnu.org; Sat, 23 Jul 2022 17:21:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#56730] [PATCH 1/2]: gnu: Add libsep References: In-Reply-To: Resent-From: Sharlatan Hellseher Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 23 Jul 2022 21:21:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 56730 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 56730@debbugs.gnu.org Received: via spool by 56730-submit@debbugs.gnu.org id=B56730.165861122114536 (code B ref 56730); Sat, 23 Jul 2022 21:21:01 +0000 Received: (at 56730) by debbugs.gnu.org; 23 Jul 2022 21:20:21 +0000 Received: from localhost ([127.0.0.1]:46468 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oFMXs-0003mN-Nf for submit@debbugs.gnu.org; Sat, 23 Jul 2022 17:20:21 -0400 Received: from mail-ed1-f51.google.com ([209.85.208.51]:33622) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1oFMXq-0003ly-HG for 56730@debbugs.gnu.org; Sat, 23 Jul 2022 17:20:19 -0400 Received: by mail-ed1-f51.google.com with SMTP id t3so9608919edd.0 for <56730@debbugs.gnu.org>; Sat, 23 Jul 2022 14:20:18 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; h=mime-version:from:date:message-id:subject:to; bh=kqcYwaW+gUHeGVtEmsKVJNVcRG9I8xtikmWVLkhkT7E=; b=HOGHqNT/3KvxAS8E9vxcjXOr1a73944J2FNhhXjKuPSneQeOlJW559no66X1yZfPDI /o/WLx5FDJpYTxWtv56JM4hDAOOg2lXmwd/k16ml7owMuGbv1WtQfRVjqBclLW95dG05 L8f0XiBbdIkzFE/KNccjQCe9566Jhuy15GkOwUYgCUxFQ1WEH3Zd5R5l8r1uMvT5n46n MiZpax6Nk/VUeIcwkd39TES+GPpiROtfGC4HRk6xeMbMQJHm1wnV45tqXUV/yEfK4owi 8yBEK0VefrV2JwpD+8DEtWDyMkYjmQemTyJQH+89AAHWLuAE2JHe2CuS/1kphZ+CpQ++ deJA== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; h=x-gm-message-state:mime-version:from:date:message-id:subject:to; bh=kqcYwaW+gUHeGVtEmsKVJNVcRG9I8xtikmWVLkhkT7E=; b=5BFSFXFs1VSobPHU/KNh+C0EU3v+W9I5LEqncm/n01/cPl01GhHz+TcJmbN9SzwPut OBPjh91uMJINv0EcIlFzNY0C+D5tywAWtQQ2RL8Mhwf7y2rj190f1A02hxPUbuulmbds eXNpG+GvM1qWy2C+YpuxzNNE4iRJOvml1hJoWMwsCXxq40TD3jM32Mo4phDj6chu9USl bh4SDxD+3VA5xzJAPYyGb1WA98Ha6pZ+0tNv6jhOqJfbFm9mcTNYqbcs3N3AVIB7cEUS lHR6o9qT6lGA7sp1VozzRO/j87G09O8j+4/i3ISOLf24uPwCW3flYSD//tV2JC2iQrpp aYuA== X-Gm-Message-State: AJIora+HFmxR0S5DDz9YtofA+LRytho/WWgBjcfCYgiFZ7PzTTKk9QxX 21EjoSyFLilHMK4NU0umjZyUs7sDiYWVGoZo3lo3Mdf9 X-Google-Smtp-Source: AGRyM1vvEeXlpfYXEnj9TF1OMHoCdZ0Q8t+nF2tbdWGRPxaG9ZjHb5qg3vqlr//povhZVWysjF9ESUGmRAHzhCRcTAE= X-Received: by 2002:a05:6402:26d5:b0:43a:bf2a:c27b with SMTP id x21-20020a05640226d500b0043abf2ac27bmr5961288edd.61.1658611212369; Sat, 23 Jul 2022 14:20:12 -0700 (PDT) MIME-Version: 1.0 From: Sharlatan Hellseher Date: Sat, 23 Jul 2022 22:20:01 +0100 Message-ID: X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches -- … наш разум - превосходная объяснительная машина которая способна найти смысл почти в чем угодно, истолковать любой феномен, но совершенно не в состоянии принять мысль о непредсказуемости. From 67b697c2e8fd8a2fa81914ead555290b0e2fb36b Mon Sep 17 00:00:00 2001 From: Sharlatan Hellseher Date: Sat, 23 Jul 2022 22:00:44 +0100 Subject: [PATCH 1/2] gnu: Add libsep * gnu/packages/astronomy.scm: (libsep): New variable. --- gnu/packages/astronomy.scm | 42 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 42 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 498252aaf4..e5f50001fe 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1131,6 +1131,48 @@ (define-public libnova (license (list license:lgpl2.0+ license:gpl2+)))) ; examples/transforms.c & lntest/*.c +(define-public libsep + (package + (name "libsep") + (version "1.2.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/kbarbary/sep") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0sag96am6r1ffh9860yq40js874362v3132ahlm6sq7padczkicf")))) + (build-system cmake-build-system) + (arguments + (list + #:make-flags #~(list (string-append "CC=" #$(cc-for-target)) + (string-append "PREFIX=" #$output)) + #:phases #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (chdir "../source") + (invoke "make" + (string-append "CC=" #$(cc-for-target)) + "test"))))))) + (native-inputs + (list python-wrapper)) + (home-page "https://github.com/kbarbary/sep") + (synopsis "Astronomical source extraction and photometry library") + (description + "SEP makes the core algorithms of +@url{https://www.astromatic.net/software/sextractor/, sextractor} available as a +library of stand-alone functions and classes. These operate directly on +in-memory arrays (no FITS files or configuration files). The code is derived +from the Source Extractor code base (written in C) and aims to produce results +compatible with Source Extractor whenever possible. SEP consists of a C library +with no dependencies outside the standard library, and a Python module that +wraps the C library in a Pythonic API. The Python wrapper operates on NumPy +arrays with NumPy as its only dependency.") + (license (list license:expat license:lgpl3+ license:bsd-3)))) + (define-public libskry (package (name "libskry") -- 2.36.1 From patchwork Sat Jul 23 21:20:44 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 40886 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id B06B827BBEA; Sat, 23 Jul 2022 22:22:17 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 4317527BBE9 for ; Sat, 23 Jul 2022 22:22:17 +0100 (BST) Received: from localhost ([::1]:43310 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1oFMZk-0005zZ-EA for patchwork@mira.cbaines.net; Sat, 23 Jul 2022 17:22:16 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:45090) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1oFMZW-0005zN-L6 for guix-patches@gnu.org; Sat, 23 Jul 2022 17:22:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:56723) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1oFMZW-0004LW-An for guix-patches@gnu.org; Sat, 23 Jul 2022 17:22:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1oFMZW-0003po-6t for guix-patches@gnu.org; Sat, 23 Jul 2022 17:22:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#56730] [PATCH 2/2]: gnu: python-sep: Update to 1.2.1 References: In-Reply-To: Resent-From: Sharlatan Hellseher Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 23 Jul 2022 21:22:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 56730 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 56730@debbugs.gnu.org Received: via spool by 56730-submit@debbugs.gnu.org id=B56730.165861126314652 (code B ref 56730); 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From 12c617952c5b9294899da48a56bd936d2cfa5e86 Mon Sep 17 00:00:00 2001 From: Sharlatan Hellseher Date: Sat, 23 Jul 2022 22:12:30 +0100 Subject: [PATCH 2/2] gnu: python-sep: Update to 1.2.1 * gnu/packages/astronomy.scm: (python-sep): Update to 1.2.1. Inherit from libsep --- gnu/packages/astronomy.scm | 27 +++++++++------------------ 1 file changed, 9 insertions(+), 18 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index e5f50001fe..83d058d5c4 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1650,27 +1650,18 @@ (define-public python-pyerfa (define-public python-sep (package + (inherit libsep) (name "python-sep") - (version "1.1.1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "sep" version)) - (sha256 - (base32 "0wxdqn92q1grv8k7xi7h88ac6wnznw4xh5bdlz1vz6za2dgsyj4m")))) (build-system python-build-system) + (arguments + (strip-keyword-arguments + '(#:make-flags) (package-arguments libsep))) (native-inputs - (list python-cython python-pytest)) - (inputs - (list python-numpy)) - (home-page "https://github.com/kbarbary/sep") - (synopsis "Astronomical source extraction and photometry library") - (description - "SEP makes the core algorithms of Source Extractor available as a library -of stand-alone functions and classes.") - (license (list license:bsd-3 - license:expat - license:lgpl3+)))) + (modify-inputs (package-inputs libsep) + (prepend python-cython))) + (propagated-inputs + (modify-inputs (package-inputs libsep) + (prepend python-numpy))))) (define-public python-asdf (package -- 2.36.1