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envelope-from=MadalinIonel.Patrascu@mdc-berlin.de; helo=c2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioconductor.scm (r-agimicrorna): New variable. --- gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) base-commit: 098f2eea331121905e3c867f478b22cea3510841 diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a78903becc..78075de4e0 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1877,6 +1877,36 @@ (define-public r-agilp ;; GPLv3. (license license:gpl3))) +(define-public r-agimicrorna + (package + (name "r-agimicrorna") + (version "2.46.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "AgiMicroRna" version)) + (sha256 + (base32 + "0jic89gyphbv7jzlfgm9bh1aq48lp86rq6hr34gsg9z0pa1192xa")))) + (properties `((upstream-name . "AgiMicroRna"))) + (build-system r-build-system) + (propagated-inputs + (list r-affy + r-affycoretools + r-biobase + r-limma + r-preprocesscore)) + (home-page "https://git.bioconductor.org/packages/AgiMicroRna") + (synopsis + "Processing and differential expression analysis of Agilent microRNA chips") + (description + "@code{AgiMicroRna} provides useful functionality for the processing, quality +assessment and differential expression analysis of Agilent microRNA array data. +The package uses a limma-like structure to generate the processed data in order +to make statistical inferences about differential expression using the linear +model features implemented in limma. Standard Bioconductor objects are used so +that other packages could be used as well.") + (license license:gpl3))) + (define-public r-aneufinder (package (name "r-aneufinder")