From patchwork Sat Jun 1 15:36:33 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28158 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 3DABA27BBEA; Sat, 1 Jun 2024 16:41:30 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 08F5F27BBE2 for ; Sat, 1 Jun 2024 16:41:28 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpl-0000s9-Q3; Sat, 01 Jun 2024 11:39:53 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpj-0000qj-1f for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:51 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpi-0007gi-Pw for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:50 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQpu-0003e4-CN for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 01/32] guix: import: pypi: Ignore pypi-ignored-inputs. 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(compute-inputs): Use it. * tests/pypi.scm (parse-requires.txt): Add ignored input to test the feature. * guix/lint.scm (check-inputs-should-be-native): Adapt list. (check-inputs-should-not-be-an-input-at-all): Use pypi-ignored-list. Change-Id: I774e526c5a090026e778ee44049637174a1dca95 --- guix/import/pypi.scm | 21 ++++++++++++++++++--- guix/lint.scm | 12 +++++++----- tests/pypi.scm | 3 ++- 3 files changed, 27 insertions(+), 9 deletions(-) diff --git a/guix/import/pypi.scm b/guix/import/pypi.scm index 6719fde330a..d4b70061e86 100644 --- a/guix/import/pypi.scm +++ b/guix/import/pypi.scm @@ -14,6 +14,7 @@ ;;; Copyright © 2022 Vivien Kraus ;;; Copyright © 2021 Simon Tournier ;;; Copyright © 2022 Hartmut Goebel +;;; Copyright © 2024 Nicolas Graves ;;; ;;; This file is part of GNU Guix. ;;; @@ -61,6 +62,7 @@ (define-module (guix import pypi) #:use-module (guix upstream) #:use-module ((guix licenses) #:prefix license:) #:export (%pypi-base-url + pypi-ignored-inputs parse-requires.txt parse-wheel-metadata specification->requirement-name @@ -77,6 +79,18 @@ (define %pypi-base-url ;; Base URL of the PyPI API. (make-parameter "https://pypi.org/pypi/")) +(define pypi-ignored-inputs + ;; This list contains packages that are useful for development or quality + ;; testing, but that most of the time are not necessary to have as an input. + (list "argparse" ; native + "tox" ; test wrapper for other environments + "codecov" "coverage" ; coverage + "black" "isort" "pycodestyle" "pep8" ; style + "pyflakes" "flake8" "pylint" "mypy" ; style+lint + "coveralls" "twine" ; upload integration tools + "pytest-isort" "pytest-flake8" "pytest-cov" "pytest-black" + "pytest-pep8" "pytest-mypy" "pytest-pep8" "pre-commit")) ; variants + (define non-empty-string-or-false (match-lambda ("" #f) @@ -424,9 +438,10 @@ (define (compute-inputs source-url wheel-url archive) "Given the SOURCE-URL and WHEEL-URL of an already downloaded ARCHIVE, return the corresponding list of records." (define (requirements->upstream-inputs deps type) - (filter-map (match-lambda - ("argparse" #f) - (name (upstream-input + (filter-map (lambda (name) + (if (member name pypi-ignored-inputs) + #f + (upstream-input (name name) (downstream-name (python->package-name name)) (type type)))) diff --git a/guix/lint.scm b/guix/lint.scm index 68d532968de..f689cc2a2a8 100644 --- a/guix/lint.scm +++ b/guix/lint.scm @@ -71,6 +71,7 @@ (define-module (guix lint) hg-reference-url) #:autoload (guix bzr-download) (bzr-reference? bzr-reference-url) + #:use-module ((guix import pypi) #:select (pypi-ignored-inputs)) #:use-module (guix import stackage) #:use-module (ice-9 match) #:use-module (ice-9 regex) @@ -557,14 +558,12 @@ (define (check-inputs-should-be-native package) "m4" "qttools-5" "yasm" "nasm" "fasm" - "python-coverage" "python-cython" "python-docutils" "python-mock" "python-nose" "python-pbr" "python-pytest" - "python-pytest-cov" "python-setuptools-scm" "python-sphinx" "scdoc" @@ -586,9 +585,12 @@ (define (check-inputs-should-be-native package) (define (check-inputs-should-not-be-an-input-at-all package) ;; Emit a warning if some inputs of PACKAGE are likely to should not be ;; an input at all. - (let ((input-names '("python-setuptools" - "python-pip" - "python-pre-commit"))) + (let ((input-names (append + '("python-setuptools" + "python-pip" + "pre-commit") + (map (cut string-append "python-" <>) + pypi-ignored-inputs)))) (map (lambda (input) (make-warning package diff --git a/tests/pypi.scm b/tests/pypi.scm index 42b39cde730..fe01ab3beb3 100644 --- a/tests/pypi.scm +++ b/tests/pypi.scm @@ -97,6 +97,7 @@ (define test-requires.txt "\ [test] pytest (>=2.5.0) +pytest-cov # read but ignored ") ;; Beaker contains only optional dependencies. @@ -244,7 +245,7 @@ (define-syntax-rule (with-pypi responses body ...) (map specification->requirement-name test-specifications)) (test-equal "parse-requires.txt" - (list '("foo" "bar") '("pytest")) + (list '("foo" "bar") '("pytest" "pytest-cov")) (mock ((ice-9 ports) call-with-input-file call-with-input-string) (parse-requires.txt test-requires.txt))) From patchwork Sat Jun 1 15:36:34 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28130 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CC15E27BBE9; Sat, 1 Jun 2024 16:40:10 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 8C20127BBE2 for ; Sat, 1 Jun 2024 16:40:09 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpk-0000rg-My; Sat, 01 Jun 2024 11:39:52 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpj-0000r8-Oq for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:51 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpj-0007go-HG for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:51 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQpv-0003eJ-6J for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 02/32] build-system/pyproject: Ignore unwanted pytest flags. 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Change-Id: Ib9f1602e5af11227e5b7ce124f0f9be4fa2b78e4 --- guix/build/pyproject-build-system.scm | 99 ++++++++++++++++++++++++++- 1 file changed, 96 insertions(+), 3 deletions(-) diff --git a/guix/build/pyproject-build-system.scm b/guix/build/pyproject-build-system.scm index 947d240114a..2df9f2f4798 100644 --- a/guix/build/pyproject-build-system.scm +++ b/guix/build/pyproject-build-system.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2021 Lars-Dominik Braun ;;; Copyright © 2022 Marius Bakke +;;; Copyright © 2024 Nicolas Graves ;;; ;;; This file is part of GNU Guix. ;;; @@ -35,7 +36,8 @@ (define-module (guix build pyproject-build-system) add-installed-pythonpath site-packages python-version - pyproject-build)) + pyproject-build + with-guix-pytest-plugin)) ;;; Commentary: ;;; @@ -142,7 +144,94 @@ (define* (build #:key outputs build-backend backend-path configure-flags #:allow wheel-dir config-settings))) -(define* (check #:key tests? test-backend test-flags #:allow-other-keys) +(define pytest-default-ignore-alist + '(("cov" . ("--cov" "--cov-reset" "--cov-report" "--cov-config" + "--no-cov-on-fail" "--no-cov" "--cov-fail-under" + "--cov-append" "--cov-branch" "--cov-context")) + ("mypy" . ("--mypy" "--mypy-config-file" "--mypy-ignore-missing-imports")) + ("isort" . ("--isort")) + ("flake8" . ("--flake8")) + ("black" . ("--black")) + ("flakes" . ("--flakes")) + ("pep8" . ("--pep8")))) + +(define (pytest-ignore-flags-plugin flags) + "This function converts an list of flags into a string that can + be instantiated as a python pytest plugin." + (format #f "\ +import pytest + +def pytest_addoption(parser): + group = parser.getgroup('guix','Guix ignored options') + options = [~{~s, ~}] + for option in options: + group.addoption(option, action='append', nargs='?')" + flags)) + +(define (call-with-guix-pytest-plugin inputs thunk) + "This function emulates command line options provided by pytest plugins in +the absence of the plugins defining these options. + +This is done by selecting absent plugins, gettings their flags defined in +PYTEST-DEFAULT-IGNORE-ALIST, and generating the plugin from there with +PYTEST-IGNORE-FLAGS-PLUGIN." + (let* ((former-path (getenv "PYTHONPATH")) + (input-names + (map car + (filter (match-lambda + ((name . _) + (if (string-prefix? "python-pytest-" name) + name + #f)) + ( _ #f)) + inputs))) + (filtered-flags + (filter identity + (append-map + (match-lambda + ((group . flags) + (if (member (string-append "python-pytest-" group) + input-names) + (list #f) + flags)) + (_ (list #f))) + pytest-default-ignore-alist))) + (dir (string-append + (if (access? (dirname (getcwd)) W_OK) + (dirname (getcwd)) + ;; fallback if we're already out-of-source + (getcwd)) + "/.guix-pytest"))) + (dynamic-wind + (lambda () + (setenv "PYTHONPATH" + (string-append + (if former-path + (string-append former-path ":") + "") + dir)) + (setenv "PYTEST_PLUGINS" + (string-append + (if (getenv "PYTEST_PLUGINS") + (string-append former-path ",") + "") + "pytest_guix_plugin")) + (mkdir-p dir) + (with-output-to-file (string-append dir "/__init__.py") + (lambda _ (display ""))) + (with-output-to-file (string-append dir "/pytest_guix_plugin.py") + (lambda _ + (display (pytest-ignore-flags-plugin filtered-flags))))) + thunk + (lambda () + (setenv "PYTHONPATH" former-path) + (unsetenv "PYTEST_PLUGINS"))))) + +(define-syntax-rule (with-guix-pytest-plugin inputs exp ...) + "Evaluate EXP in a context where the Guix pytest plugin is added." + (call-with-guix-pytest-plugin inputs (lambda () exp ...))) + +(define* (check #:key inputs tests? test-backend test-flags #:allow-other-keys) "Run the test suite of a given Python package." (if tests? ;; Unfortunately with PEP 517 there is no common method to specify test @@ -165,7 +254,8 @@ (define* (check #:key tests? test-backend test-flags #:allow-other-keys) (format #t "Using ~a~%" use-test-backend) (match use-test-backend ('pytest - (apply invoke pytest "-vv" test-flags)) + (with-guix-pytest-plugin inputs + (apply invoke pytest "-vv" test-flags))) ('nose (apply invoke nosetests "-v" test-flags)) ('nose2 @@ -386,3 +476,6 @@ (define* (pyproject-build #:key inputs (phases %standard-phases) (apply python:python-build #:inputs inputs #:phases phases args)) ;;; pyproject-build-system.scm ends here +;;; Local Variables: +;;; eval: (put 'with-guix-pytest-plugin 'scheme-indent-function 1) +;;; End: From patchwork Sat Jun 1 15:36:35 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28134 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 1368B27BBE9; Sat, 1 Jun 2024 16:40:38 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED,URIBL_SBL_A autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 560B327BBE2 for ; Sat, 1 Jun 2024 16:40:33 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpm-0000sq-Ja; Sat, 01 Jun 2024 11:39:54 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpk-0000ri-Uj for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:52 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpk-0007gy-Mq for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:52 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQpw-0003ed-B6 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 03/32] build-system/pyproject: Remove python-black input. Resent-From: Nicolas Graves Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 01 Jun 2024 15:40:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 70858 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 70858@debbugs.gnu.org Cc: ngraves@ngraves.fr Received: via spool by 70858-submit@debbugs.gnu.org id=B70858.171725635913748 (code B ref 70858); Sat, 01 Jun 2024 15:40:04 +0000 Received: (at 70858) by debbugs.gnu.org; 1 Jun 2024 15:39:19 +0000 Received: from localhost ([127.0.0.1]:57131 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpD-0003Zf-0b for submit@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:19 -0400 Received: from 17.mo582.mail-out.ovh.net ([46.105.36.150]:49909) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpA-0003Yz-CT for 70858@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:17 -0400 Received: from director3.ghost.mail-out.ovh.net (unknown [10.108.2.10]) by mo582.mail-out.ovh.net (Postfix) with ESMTP id 4Vs40R2lHvz1Fln for <70858@debbugs.gnu.org>; Sat, 1 Jun 2024 15:39:03 +0000 (UTC) Received: from ghost-submission-6684bf9d7b-rnhkd (unknown [10.110.178.153]) by director3.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 241D51FE40; Sat, 1 Jun 2024 15:39:03 +0000 (UTC) Received: from ngraves.fr ([37.59.142.95]) by ghost-submission-6684bf9d7b-rnhkd with ESMTPSA id vRXyBpdAW2ZwJxUA6NNaiw (envelope-from ); Sat, 01 Jun 2024 15:39:03 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-95G00187c0db4d-ec00-4ca8-8074-8519fb3d2cd5, 066A105622CFB65C0C1E9735678F98E7108F9FA5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 Date: Sat, 1 Jun 2024 17:36:35 +0200 Message-ID: <20240601153854.30805-4-ngraves@ngraves.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240601153854.30805-1-ngraves@ngraves.fr> References: <20240601153854.30805-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Ovh-Tracer-Id: 4654188740202062562 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 49 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgledtucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucgoufhushhpvggtthffohhmrghinhculdegledmnecujfgurhephffvvefufffkofgjfhgggfestdekredtredttdenucfhrhhomheppfhitgholhgrshcuifhrrghvvghsuceonhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrqeenucggtffrrghtthgvrhhnpeduteehuedtjeejteelfeduhfefvdehledtjeefgeefjeeiledufffgveevvdfgudenucffohhmrghinhepghhithhhuhgsrdgtohhmpdhgihhthhhusgdrihhonecukfhppeduvdejrddtrddtrddupdekuddrieejrddugeeirddvtdekpdefjedrheelrddugedvrdelheenucevlhhushhtvghrufhiiigvpedtnecurfgrrhgrmhepihhnvghtpeduvdejrddtrddtrddupdhmrghilhhfrhhomhepnhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrpdhnsggprhgtphhtthhopedupdhrtghpthhtohepjedtkeehkeesuggvsggsuhhgshdrghhnuhdrohhrghdpoffvtefjohhsthepmhhoheekvddpmhhouggvpehsmhhtphhouhht X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Nicolas Graves X-ACL-Warn: , Nicolas Graves via Guix-patches X-Patchwork-Original-From: Nicolas Graves via Guix-patches via From: Nicolas Graves Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (python-doubletdetection, python-liana-py, scvelo)[native-inputs]: Remove python-black. * gnu/packages/databases.scm (datasette): [arguments]<#:test-flags>: Ignore black tests. <#:phases>: Remove parts related to black in relax-requirements added phase. [native-inputs]: Remove python-black. * gnu/packages/finance.scm (python-trezor)[native-inputs]: Remove python-black. * gnu/packages/graph.scm (python-graphtools)[native-inputs]: Remove python-black. * gnu/packages/machine-learning.scm (python-funsor, python-imbalanced-learn, python-hyperopt, python-captum, python-pyro-ppl)[native-inputs]: Remove python-black. * gnu/packages/python-check.scm (python-vcrpy)[native-inputs]: Remove python-black. * gnu/packages/python-web.scm (python-ovh, python-openai, python-starsessions-for-pytorch-lightning)[native-inputs]: Remove python-black. * gnu/packages/python-xyz.scm (python-pydantic-cli, python-imageio, python-update-checker, python-eliot, python-minikanren, python-jupytext)[native-inputs]: Remove python-black. (ptpython)[propagated-inputs]: Remove python-black. * gnu/packages/virtualization.scm (python-transient)[native-inputs]: Remove python-black. Change-Id: Ie8098afda264bf9a5ab2cfe5d915bc7a41fdc604 --- gnu/packages/bioinformatics.scm | 11 +++-------- gnu/packages/databases.scm | 8 ++------ gnu/packages/finance.scm | 1 - gnu/packages/graph.scm | 1 - gnu/packages/machine-learning.scm | 11 +++-------- gnu/packages/python-check.scm | 3 +-- gnu/packages/python-web.scm | 8 +++----- gnu/packages/python-xyz.scm | 15 +++++---------- gnu/packages/virtualization.scm | 3 +-- 9 files changed, 18 insertions(+), 43 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index d4a39fd3e1a..adeb7b1c3be 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2152,8 +2152,7 @@ (define-public python-doubletdetection python-scipy python-tqdm)) (native-inputs - (list python-black - python-flake8 + (list python-flake8 python-poetry-core python-pytest)) (home-page "https://github.com/JonathanShor/DoubletDetection") @@ -2278,10 +2277,7 @@ (define-public python-liana-py python-tqdm tzdata)) (native-inputs - (list python-black - python-poetry-core - python-pytest - python-pytest-cov)) + (list python-poetry-core python-pytest python-pytest-cov)) (home-page "https://github.com/saezlab/liana-py") (synopsis "LIANA is a ligand-receptor analysis framework") (description "This is a Ligand-Receptor inference framework. The @@ -21838,8 +21834,7 @@ (define-public scvelo python-umap-learn pybind11)) (native-inputs - (list python-black - python-flake8 + (list python-flake8 python-hypothesis python-pytest python-setuptools-scm diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 67e6ced7c32..96b2c2a0437 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -5537,16 +5537,13 @@ (define-public datasette " or test_custom_query_with_unicode_characters" " or test_searchmode)") "-n" (number->string (parallel-job-count)) - "-m" "not serial") ;cannot run in parallel + "-m" "not serial" ;cannot run in parallel + "--ignore=tests/test_black.py") #:phases #~(modify-phases %standard-phases (add-after 'unpack 'relax-requirements (lambda _ - ;; The package needlessly specifies exact versions - ;; of dependencies, when it works fine with others. (substitute* "setup.py" - (("(black)==[0-9\\.]+" _ package) - package) (("click-default-group-wheel") "click-default-group"))))))) (propagated-inputs @@ -5569,7 +5566,6 @@ (define-public datasette python-uvicorn)) (native-inputs (list python-beautifulsoup4 - python-black python-cogapp python-pip python-pytest diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm index 3c32a220c4e..7d1efde8187 100644 --- a/gnu/packages/finance.scm +++ b/gnu/packages/finance.scm @@ -1149,7 +1149,6 @@ (define-public python-trezor python-typing-extensions)) (native-inputs ; Only needed for running the tests (list protobuf - python-black python-isort python-pillow python-protobuf diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index eda8365a424..033027a5aa9 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -476,7 +476,6 @@ (define-public python-graphtools (native-inputs (list util-linux ;for lscpu python-anndata - python-black python-coverage python-coveralls python-nose diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index d5ce3bfe7de..494d7174859 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -175,8 +175,7 @@ (define-public python-funsor (propagated-inputs (list python-makefun python-multipledispatch python-numpy python-opt-einsum python-typing-extensions)) - (native-inputs (list python-black - python-flake8 + (native-inputs (list python-flake8 python-isort python-nbsphinx python-pandas @@ -1923,8 +1922,7 @@ (define-public python-imbalanced-learn (getcwd))))))) (propagated-inputs (list python-joblib python-numpy python-scikit-learn python-scipy python-threadpoolctl)) - (native-inputs (list python-black - python-flake8 + (native-inputs (list python-flake8 python-keras python-mypy python-pandas @@ -2359,8 +2357,7 @@ (define-public python-hyperopt python-six python-tqdm)) (native-inputs - (list python-black - python-nose + (list python-nose python-pymongo python-pytest python-wheel)) @@ -4525,7 +4522,6 @@ (define-public python-captum (list python-matplotlib python-numpy python-pytorch python-tqdm)) (native-inputs (list jupyter python-annoy - python-black python-flake8 python-flask python-flask-compress @@ -5064,7 +5060,6 @@ (define-public python-pyro-ppl (native-inputs (list ninja jupyter - python-black python-flake8 python-graphviz python-isort diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index e3f0499fecb..ca87289a1e1 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -411,8 +411,7 @@ (define-public python-vcrpy (propagated-inputs (list python-pyyaml python-six python-wrapt python-yarl)) (native-inputs - (list python-black - python-coverage + (list python-coverage python-flake8 python-flask python-httplib2 diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index e417fc2bb47..4f5d7baab97 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -977,8 +977,7 @@ (define-public python-ovh (build-system pyproject-build-system) (arguments (list #:tests? #f)) ; XXX: tests require networking (propagated-inputs (list python-requests)) - (native-inputs (list python-black - python-coverage + (native-inputs (list python-coverage python-flake8 python-isort python-pytest @@ -2171,7 +2170,7 @@ (define-public python-openai and not test_file_cli"))) (propagated-inputs (list python-aiohttp python-requests python-tqdm python-typing-extensions)) - (native-inputs (list python-black python-pytest python-pytest-asyncio + (native-inputs (list python-pytest python-pytest-asyncio python-pytest-mock python-setuptools python-wheel)) (home-page "https://github.com/openai/openai-python") (synopsis "Python client library for the OpenAI API") @@ -8974,8 +8973,7 @@ (define-public python-starsessions-for-pytorch-lightning python-itsdangerous python-starlette-for-fastapi-0.88)) (native-inputs - (list python-black - python-flake8 + (list python-flake8 python-httpx python-mypy python-poetry-core diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index d81de891c4f..0388cefee4c 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -478,7 +478,6 @@ (define-public python-jupytext (native-inputs (list git-minimal python-autopep8 - python-black python-flake8 python-gitpython python-isort @@ -8029,8 +8028,7 @@ (define-public python-pydantic-cli (propagated-inputs (list python-pydantic)) (native-inputs - (list python-black - python-mypy + (list python-mypy python-pytest)) (home-page "https://github.com/mpkocher/pydantic-cli") (synopsis "Turn Pydantic defined data models into CLI tools") @@ -10812,7 +10810,7 @@ (define-public python-imageio (propagated-inputs (list python-imageio-ffmpeg python-numpy python-pillow python-tifffile python-setuptools)) (native-inputs - (list python-black python-flake8 python-fsspec python-pytest + (list python-flake8 python-fsspec python-pytest python-pytest-cov python-wheel)) (home-page "https://imageio.github.io/") (synopsis "Library for reading and writing a wide range of image data") @@ -22112,8 +22110,7 @@ (define-public ptpython (arguments `(#:tests? #f)) ;there are no tests (propagated-inputs - (list python-appdirs python-black python-jedi python-prompt-toolkit - python-pygments)) + (list python-appdirs python-jedi python-prompt-toolkit python-pygments)) (home-page "https://github.com/jonathanslenders/ptpython") (synopsis "Python Read-Eval-Print-Loop with nice IDE-like features") (description @@ -27295,7 +27292,7 @@ (define-public python-update-checker (base32 "04yb5a9mi45ax50m2m0ih6gdvkk1j7gfmy83dd58i1f59axlabba")))) (build-system python-build-system) (propagated-inputs (list python-requests)) - (native-inputs (list python-black python-flake8 python-pytest)) + (native-inputs (list python-flake8 python-pytest)) (home-page "https://github.com/bboe/update_checker") (synopsis "Python module that will check for package updates") (description "This package provides a Python module that will check for @@ -31409,8 +31406,7 @@ (define-public python-eliot (list python-boltons python-pyrsistent python-six python-zope-interface)) (native-inputs - (list python-black - python-coverage + (list python-coverage python-dask python-flake8 python-hypothesis @@ -34165,7 +34161,6 @@ (define-public python-minikanren python-pytest python-pytest-cov python-pylint - python-black python-sympy python-versioneer python-coverage)) diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm index 6d28b32c863..85ad5031059 100644 --- a/gnu/packages/virtualization.scm +++ b/gnu/packages/virtualization.scm @@ -2809,8 +2809,7 @@ (define-public python-transient python-requests python-toml)) (native-inputs - (list python-black - python-mypy + (list python-mypy python-pyhamcrest python-setuptools python-twine From patchwork Sat Jun 1 15:36:36 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28148 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 8014427BBF2; Sat, 1 Jun 2024 16:41:13 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 57E2527BBE2 for ; Sat, 1 Jun 2024 16:41:11 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpn-0000t9-Ad; Sat, 01 Jun 2024 11:39:55 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpm-0000sc-5P for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:54 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpl-0007h4-TI for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:53 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQpx-0003et-H8 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 04/32] build-system/pyproject: Remove python-pylint native-input. 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Change-Id: If6a20e0b790f7157013a6868bba9e4a8d7e5ba28 --- gnu/packages/potassco.scm | 3 +-- gnu/packages/python-xyz.scm | 3 --- gnu/packages/syndication.scm | 2 -- gnu/packages/terminals.scm | 5 ++--- 4 files changed, 3 insertions(+), 10 deletions(-) diff --git a/gnu/packages/potassco.scm b/gnu/packages/potassco.scm index 9af307b4a90..054f9e9b180 100644 --- a/gnu/packages/potassco.scm +++ b/gnu/packages/potassco.scm @@ -563,8 +563,7 @@ (define-public python-clingraph python-jsonschema python-networkx python-setuptools)) - (native-inputs (list dot2tex graphviz python-pylint python-pytest - python-wheel)) + (native-inputs (list dot2tex graphviz python-pytest python-wheel)) (home-page "https://github.com/potassco/clingraph") (synopsis "Visualizer for graphs defined as logic programs") (description diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 0388cefee4c..8d4ce3f9844 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -4440,7 +4440,6 @@ (define-public python-mediapy python-pillow)) (native-inputs (list python-flit-core - python-pylint python-pytest python-pytest-xdist)) (home-page "https://github.com/google/mediapy") @@ -17189,7 +17188,6 @@ (define-public python-fastjsonschema (list python-colorama python-json-spec python-jsonschema - python-pylint python-pytest python-pytest-benchmark python-pytest-cache @@ -29079,7 +29077,6 @@ (define-public python-trio (list python-astor python-ipython python-jedi - python-pylint python-pyopenssl python-pytest python-pytest-xdist diff --git a/gnu/packages/syndication.scm b/gnu/packages/syndication.scm index bbb89099b06..0f12f94d0bc 100644 --- a/gnu/packages/syndication.scm +++ b/gnu/packages/syndication.scm @@ -437,7 +437,6 @@ (define-public rtv python-coveralls python-coverage python-mock - python-pylint python-pytest python-vcrpy)) (home-page "https://github.com/michael-lazar/rtv") @@ -472,7 +471,6 @@ (define-public tuir (list python-coverage python-coveralls python-mock - python-pylint python-pytest python-setuptools python-vcrpy diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm index 8d9157fd949..90dc011a70e 100644 --- a/gnu/packages/terminals.scm +++ b/gnu/packages/terminals.scm @@ -1199,7 +1199,6 @@ (define-public python-halo (native-inputs (list python-coverage python-nose - python-pylint python-setuptools python-tox python-twine @@ -1230,7 +1229,7 @@ (define-public python-log-symbols (("(.*)==(.*)$" _ dep ver) (string-append dep ">=" ver)))))))) (propagated-inputs (list python-colorama)) - (native-inputs (list python-coverage python-nose python-pylint + (native-inputs (list python-coverage python-nose python-setuptools python-tox python-wheel)) (home-page "https://github.com/manrajgrover/py-log-symbols") (synopsis "Python library with graphical symbols for logging on the terminal") @@ -1258,7 +1257,7 @@ (define-public python-spinners (substitute* "requirements-dev.txt" (("(.*)==(.*)$" _ dep ver) (string-append dep ">=" ver)))))))) - (native-inputs (list python-coverage python-nose python-pylint + (native-inputs (list python-coverage python-nose python-setuptools python-tox python-wheel)) (home-page "https://github.com/manrajgrover/py-spinners") (synopsis "Python library with graphical spinners for the terminal") From patchwork Sat Jun 1 15:36:37 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28136 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id F240B27BBEC; Sat, 1 Jun 2024 16:40:45 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED,URIBL_SBL_A autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 009C127BBE2 for ; Sat, 1 Jun 2024 16:40:42 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpp-0000uH-9o; Sat, 01 Jun 2024 11:39:57 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpn-0000tA-Hc for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:55 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpn-0007hA-8Z for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:55 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQpy-0003f9-SG for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:06 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 05/32] build-system/pyproject: Remove python-flake8 inputs. 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[native-inputs]: Remove python-flake8. * gnu/packages/protobuf.scm (python-pure-protobuf): [arguments]<#:phases>: Remove flake8 invocation from check phase. [native-inputs]: Remove python-flake8. * gnu/packages/python-web.scm (python-ovh, python-furl, python-httplib2, python-http-ece, python-woob, python-starsessions-for-pytorch-lightning)[native-inputs]: Remove python-flake8. * gnu/packages/python-xyz.scm (python-apispec, python-apispec-webframeworks, python-apprise, python-colorful, python-pymd4c, python-pyls-black, python-docx, python-flasgger, python-imageio, python-importlib-ressources, python-jaraco-test, python-seaborn, python-progressbar2, python-inflect, python-argcomplete, python-diff-cover, python-validators, python-marshmallow, python-marshmallow-jsonapi, python-yq, python-update-checker, python-eliot, python-dateparser, python-jinja2-cli, python-nikola, python-verspec, python-mike, python-arpeggio, python-versioneer, python-codespell)[native-inputs]: Remove python-flake8. * gnu/packages/simulation.scm (python-dolfin-adjoint)[native-inputs]: Remove python-flake8. * gnu/packages/sphinx.scm (python-sphinx, python-sphinx-5)[propagated-inputs]: Remove python-flake8. * gnu/packages/statistics.scm (python-statsmodels)[native-inputs]: Remove python-flake8. * gnu/packages/vpn.scm (sshuttle)[native-inputs]: Remove python-flake8. * gnu/packages/wm.scm (qtile)[native-inputs]: Remove python-flake8. * gnu/packages/textutils.scm (python-panflute)[native-inputs]: Remove python-flake8. Change-Id: I196a9c0b7497106c8f98598535cb8e0ea667481c --- gnu/packages/astronomy.scm | 3 +- gnu/packages/bioinformatics.scm | 7 +--- gnu/packages/ebook.scm | 1 - gnu/packages/engineering.scm | 1 - gnu/packages/finance.scm | 4 +- gnu/packages/geo.scm | 1 - gnu/packages/gettext.scm | 1 - gnu/packages/graph.scm | 3 +- gnu/packages/graphviz.scm | 1 - gnu/packages/machine-learning.scm | 15 ++------ gnu/packages/music.scm | 4 +- gnu/packages/protobuf.scm | 4 +- gnu/packages/python-web.scm | 12 ++---- gnu/packages/python-xyz.scm | 62 +++++++++++-------------------- gnu/packages/simulation.scm | 1 - gnu/packages/sphinx.scm | 2 - gnu/packages/statistics.scm | 1 - gnu/packages/textutils.scm | 1 - gnu/packages/vpn.scm | 1 - gnu/packages/wm.scm | 1 - 20 files changed, 36 insertions(+), 90 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index c05f8e51885..02d0726b9be 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2188,8 +2188,7 @@ (define-public python-crds python-roman-datamodels python-stsynphot python-requests)) - (native-inputs (list python-flake8 - python-ipython + (native-inputs (list python-ipython python-lockfile python-mock python-nose diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index adeb7b1c3be..aa7f2988191 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2152,8 +2152,7 @@ (define-public python-doubletdetection python-scipy python-tqdm)) (native-inputs - (list python-flake8 - python-poetry-core + (list python-poetry-core python-pytest)) (home-page "https://github.com/JonathanShor/DoubletDetection") (synopsis @@ -3006,7 +3005,6 @@ (define-public python-biom-format (propagated-inputs (list python-anndata python-click - python-flake8 python-future python-h5py python-numpy @@ -21834,8 +21832,7 @@ (define-public scvelo python-umap-learn pybind11)) (native-inputs - (list python-flake8 - python-hypothesis + (list python-hypothesis python-pytest python-setuptools-scm python-wheel)) diff --git a/gnu/packages/ebook.scm b/gnu/packages/ebook.scm index 16d4fcd6e36..3d536e59add 100644 --- a/gnu/packages/ebook.scm +++ b/gnu/packages/ebook.scm @@ -154,7 +154,6 @@ (define-public calibre (native-inputs (list bash-minimal pkg-config - python-flake8 python-pyqt-builder qtbase-5 ; for qmake xdg-utils)) diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm index f082f346278..610fb53087b 100644 --- a/gnu/packages/engineering.scm +++ b/gnu/packages/engineering.scm @@ -2679,7 +2679,6 @@ (define-public python-scikit-rf python-qtpy python-scipy)) (native-inputs (list python-coverage - python-flake8 python-nbval python-networkx python-pytest diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm index 7d1efde8187..7579001dd1f 100644 --- a/gnu/packages/finance.scm +++ b/gnu/packages/finance.scm @@ -2307,9 +2307,7 @@ (define-public python-mt-940 ;; Remove custom --cov flags. (delete-file "pytest.ini") (invoke "pytest" "-vv"))))))) - (native-inputs (list python-flake8 - python-pytest - python-pyyaml)) + (native-inputs (list python-pytest python-pyyaml)) (home-page "https://mt940.readthedocs.io/") (synopsis "Python parser for MT940-encoded SWIFT data") (description diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm index 81a854f8a2a..69cc7e6ddc5 100644 --- a/gnu/packages/geo.scm +++ b/gnu/packages/geo.scm @@ -3265,7 +3265,6 @@ (define-public python-geopy (native-inputs (list python-async-generator python-coverage - python-flake8 python-isort python-pytest python-pytest-aiohttp diff --git a/gnu/packages/gettext.scm b/gnu/packages/gettext.scm index 1408cc4cb46..bbb19bd4cb8 100644 --- a/gnu/packages/gettext.scm +++ b/gnu/packages/gettext.scm @@ -214,7 +214,6 @@ (define-public mdpo (build-system python-build-system) (native-inputs (list python-bump2version - python-flake8 python-flake8-implicit-str-concat python-flake8-print python-isort diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index 033027a5aa9..eb8aa17fdfe 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -564,8 +564,7 @@ (define-public python-pygsp ""))))))) (propagated-inputs (list python-numpy python-scikit-image python-scipy)) (native-inputs - (list python-coverage python-coveralls python-flake8 - python-pytest)) + (list python-coverage python-coveralls python-pytest)) (home-page "https://github.com/epfl-lts2/pygsp") (synopsis "Graph Signal Processing in Python") (description "The PyGSP is a Python package to ease signal processing on diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm index db40b99928a..b396a97c0bc 100644 --- a/gnu/packages/graphviz.scm +++ b/gnu/packages/graphviz.scm @@ -217,7 +217,6 @@ (define-public python-uqbar and not test_sphinx_book_text_broken_strict"))) (native-inputs (list graphviz - python-flake8 python-isort python-mypy python-pytest diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 494d7174859..bf09c9ec4c1 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -175,8 +175,7 @@ (define-public python-funsor (propagated-inputs (list python-makefun python-multipledispatch python-numpy python-opt-einsum python-typing-extensions)) - (native-inputs (list python-flake8 - python-isort + (native-inputs (list python-isort python-nbsphinx python-pandas python-pillow @@ -1922,8 +1921,7 @@ (define-public python-imbalanced-learn (getcwd))))))) (propagated-inputs (list python-joblib python-numpy python-scikit-learn python-scipy python-threadpoolctl)) - (native-inputs (list python-flake8 - python-keras + (native-inputs (list python-keras python-mypy python-pandas python-pytest @@ -4522,7 +4520,6 @@ (define-public python-captum (list python-matplotlib python-numpy python-pytorch python-tqdm)) (native-inputs (list jupyter python-annoy - python-flake8 python-flask python-flask-compress python-ipython @@ -5010,8 +5007,7 @@ (define-public python-pyro-api (build-system python-build-system) (arguments '(#:tests? #false)) ;requires pyro (native-inputs - (list python-flake8 - python-ipython + (list python-ipython python-pytest python-sphinx python-sphinx-rtd-theme)) @@ -5060,7 +5056,6 @@ (define-public python-pyro-ppl (native-inputs (list ninja jupyter - python-flake8 python-graphviz python-isort python-lap @@ -5107,8 +5102,7 @@ (define-public python-linear-operator python-pytorch python-scipy python-typeguard)) - (native-inputs (list python-flake8 - python-flake8-print + (native-inputs (list python-flake8-print python-pytest python-setuptools python-setuptools-scm @@ -5139,7 +5133,6 @@ (define-public python-gpytorch " and not test_t_matmul_matrix")))) (propagated-inputs (list python-linear-operator python-scikit-learn)) (native-inputs (list python-coverage - python-flake8 python-flake8-print python-nbval python-pytest diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm index ab3fe970997..ad026f5d359 100644 --- a/gnu/packages/music.scm +++ b/gnu/packages/music.scm @@ -3968,6 +3968,7 @@ (define-public python-mutagen (build-system pyproject-build-system) (arguments (list + #:test-flags '(list "--ignore=tests/quality/test_flake8.py") #:phases #~(modify-phases %standard-phases (add-before 'check 'remove-hypothesis-deadlines @@ -3978,8 +3979,7 @@ (define-public python-mutagen (("( +)@given" all spaces) (string-append spaces "@settings(deadline=None)\n" all)))))))) (native-inputs - (list python-flake8 - python-hypothesis + (list python-hypothesis python-pytest python-setuptools python-wheel)) diff --git a/gnu/packages/protobuf.scm b/gnu/packages/protobuf.scm index 8ca730df3c3..502ad09a3a6 100644 --- a/gnu/packages/protobuf.scm +++ b/gnu/packages/protobuf.scm @@ -469,7 +469,7 @@ (define-public python-pure-protobuf (base32 "15dp5pvazd0jx4wzzh79080ah7hkpd3axh40al9vhzs2hf3v90hx")))) (build-system python-build-system) (native-inputs - (list python-flake8 python-pytest python-pytest-cov python-isort)) + (list python-pytest python-pytest-cov python-isort)) (arguments `(#:phases (modify-phases %standard-phases @@ -477,8 +477,6 @@ (define-public python-pure-protobuf (lambda _ (invoke "pytest" "--cov-report" "term-missing" "--cov" "pure_protobuf") - (invoke "flake8" "pure_protobuf" "tests" - "--ignore=F541") (invoke "isort" "-rc" "-c" "pure_protobuf" "tests")))))) (home-page "https://pypi.org/project/pure-protobuf/") (synopsis "Protobuf implementation using dataclasses") diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 4f5d7baab97..ba378088cf8 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -978,7 +978,6 @@ (define-public python-ovh (arguments (list #:tests? #f)) ; XXX: tests require networking (propagated-inputs (list python-requests)) (native-inputs (list python-coverage - python-flake8 python-isort python-pytest python-pytest-cov @@ -1240,8 +1239,6 @@ (define-public python-furl (build-system python-build-system) (propagated-inputs (list python-six python-orderedmultidict)) - (native-inputs - (list python-flake8)) (home-page "https://github.com/gruns/furl") (synopsis "URL manipulation in Python") (description "Furl provides an easy-to-use alternative to the @@ -1274,7 +1271,6 @@ (define-public python-httplib2 (("==") ">="))))))) (native-inputs (list python-cryptography - python-flake8 python-future python-mock python-pytest @@ -7313,7 +7309,7 @@ (define-public python-http-ece (propagated-inputs (list python-cryptography)) (native-inputs - (list python-coverage python-flake8 python-mock python-nose)) + (list python-coverage python-mock python-nose)) (home-page "https://github.com/web-push-libs/encrypted-content-encoding") (synopsis "Encrypted Content Encoding for HTTP") (description @@ -8333,8 +8329,7 @@ (define-public python-woob python-six python-unidecode)) (native-inputs - (list python-coverage python-flake8 python-nose python-selenium - python-xunitparser)) + (list python-coverage python-nose python-selenium python-xunitparser)) (home-page "https://woob.tech/") (synopsis "Woob, Web Outside Of Browsers") (description "Woob is a collection of applications able to interact with @@ -8973,8 +8968,7 @@ (define-public python-starsessions-for-pytorch-lightning python-itsdangerous python-starlette-for-fastapi-0.88)) (native-inputs - (list python-flake8 - python-httpx + (list python-httpx python-mypy python-poetry-core python-pytest diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 8d4ce3f9844..3ca12d05ee5 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -320,7 +320,6 @@ (define-public python-apprise (native-inputs (list python-babel python-coverage python-cryptography - python-flake8 python-paho-mqtt python-pytest python-pytest-cov @@ -1183,8 +1182,7 @@ (define-public python-colorful (base32 "0kyy9qhvrb5m9h8xmri7c88i0k1g5qc7017anw39gx44an7mn33y")))) (build-system pyproject-build-system) (native-inputs - (list python-coverage python-flake8 python-pytest python-setuptools - python-wheel)) + (list python-coverage python-pytest python-setuptools python-wheel)) (propagated-inputs (list python-colorama)) (home-page "http://github.com/timofurrer/colorful") @@ -2370,7 +2368,7 @@ (define-public python-pymd4c (inputs (list md4c)) (native-inputs - (list python-flake8 python-pkgconfig pkg-config)) + (list python-pkgconfig pkg-config)) (home-page "https://github.com/dominickpastore/pymd4c") (synopsis "Python bindings for MD4C") (description @@ -3028,7 +3026,7 @@ (define-public python-pyls-black (propagated-inputs (list python-black python-lsp-server python-toml python-tomli)) (native-inputs - (list python-flake8 python-isort python-mypy python-pytest + (list python-isort python-mypy python-pytest python-pytest-runner python-setuptools python-wheel)) (home-page "https://github.com/rupert/pyls-black") (synopsis "Black plugin for the Python Language Server") @@ -7006,7 +7004,6 @@ (define-public python-docx (build-system pyproject-build-system) (native-inputs (list behave - python-flake8 python-mock python-pyparsing python-pytest @@ -10809,7 +10806,7 @@ (define-public python-imageio (propagated-inputs (list python-imageio-ffmpeg python-numpy python-pillow python-tifffile python-setuptools)) (native-inputs - (list python-flake8 python-fsspec python-pytest + (list python-fsspec python-pytest python-pytest-cov python-wheel)) (home-page "https://imageio.github.io/") (synopsis "Library for reading and writing a wide range of image data") @@ -11587,8 +11584,7 @@ (define-public python-importlib-resources (setenv "PYTHONPATH" (string-append (getcwd) "/_custom_build"))))))) (native-inputs - (list python-flake8 - python-pytest + (list python-pytest python-pytest-black python-pytest-checkdocs python-pytest-cov @@ -11910,8 +11906,7 @@ (define-public python-jaraco-test (arguments (list #:test-flags '(list "-k" "http"))) (propagated-inputs (list python-jaraco-context python-jaraco-functools)) - (native-inputs (list python-flake8 - python-pytest + (native-inputs (list python-pytest python-pytest-black python-pytest-checkdocs python-pytest-cov @@ -13710,8 +13705,7 @@ (define-public python-seaborn python-scipy python-statsmodels)) (native-inputs - (list python-flake8 - python-flit-core + (list python-flit-core python-ipykernel python-nbconvert python-numpydoc @@ -18695,8 +18689,7 @@ (define-public python-progressbar2 (propagated-inputs (list python-six python-utils)) (native-inputs - (list python-flake8 - python-freezegun + (list python-freezegun python-pycodestyle python-pytest python-pytest-cache @@ -20052,8 +20045,7 @@ (define-public python-codespell (inputs (list python-chardet)) (native-inputs - (list python-flake8 - python-pygments + (list python-pygments python-pytest python-pytest-cov python-pytest-dependency @@ -21144,8 +21136,7 @@ (define-public python-inflect (setenv "PYTHONPATH" (string-append (getcwd) "/_custom_build"))))))) (propagated-inputs (list python-pydantic)) - (native-inputs (list python-flake8 - python-pygments + (native-inputs (list python-pygments python-pytest python-pytest-black python-pytest-checkdocs @@ -23283,7 +23274,6 @@ (define-public python-argcomplete (invoke "python3" "./test/test.py" "-v"))))))) (native-inputs (list python-coverage - python-mypy python-pexpect python-setuptools python-setuptools-scm @@ -24419,8 +24409,7 @@ (define-public python-diff-cover python-setuptools ; For pkg_resources. python-tomli)) (native-inputs - (list python-flake8 - python-poetry-core + (list python-poetry-core python-pylint python-pytest python-pytest-flake8 @@ -25087,7 +25076,7 @@ (define-public python-validators (propagated-inputs (list python-decorator python-six)) (native-inputs - (list python-flake8 python-isort python-pytest)) + (list python-isort python-pytest)) (home-page "https://github.com/kvesteri/validators") (synopsis "Data validation library") (description @@ -25156,8 +25145,7 @@ (define-public python-marshmallow (propagated-inputs (list python-packaging)) (native-inputs - (list python-flake8 - python-flake8-bugbear + (list python-flake8-bugbear python-mypy python-pytest python-pytz @@ -25185,7 +25173,6 @@ (define-public python-marshmallow-jsonapi (list python-marshmallow)) (native-inputs (list python-faker - python-flake8 python-flake8-bugbear python-flask python-mock @@ -25220,8 +25207,7 @@ (define-public python-apispec (propagated-inputs (list python-packaging)) (native-inputs - (list python-flake8 - python-flake8-bugbear + (list python-flake8-bugbear python-marshmallow python-mypy python-pytest @@ -25249,7 +25235,6 @@ (define-public python-apispec-webframeworks (propagated-inputs (list python-apispec python-setuptools)) (native-inputs (list python-bottle - python-flake8 python-flake8-bugbear python-flask python-mock @@ -25298,7 +25283,6 @@ (define-public python-flasgger (list python-apispec python-apispec-webframeworks python-decorator - python-flake8 python-flask-jwt python-flask-restful python-flex @@ -26283,7 +26267,7 @@ (define-public python-yq (inputs (list python-argcomplete python-pyyaml python-xmltodict python-toml jq)) (native-inputs - (list python-coverage python-flake8 python-setuptools-scm python-wheel)) + (list python-coverage python-setuptools-scm python-wheel)) (home-page "https://github.com/kislyuk/yq") (synopsis "Command-line YAML/XML processor") (description @@ -27290,7 +27274,7 @@ (define-public python-update-checker (base32 "04yb5a9mi45ax50m2m0ih6gdvkk1j7gfmy83dd58i1f59axlabba")))) (build-system python-build-system) (propagated-inputs (list python-requests)) - (native-inputs (list python-flake8 python-pytest)) + (native-inputs (list python-pytest)) (home-page "https://github.com/bboe/update_checker") (synopsis "Python module that will check for package updates") (description "This package provides a Python module that will check for @@ -31405,7 +31389,6 @@ (define-public python-eliot (native-inputs (list python-coverage python-dask - python-flake8 python-hypothesis python-pytest python-setuptools @@ -32194,7 +32177,7 @@ (define-public python-dateparser (list python-dateutil python-pytz python-regex python-ruamel.yaml python-tzlocal)) (native-inputs - (list python-flake8 python-pytest python-parameterized tzdata-for-tests + (list python-pytest python-parameterized tzdata-for-tests python-setuptools python-wheel)) (arguments `(#:phases @@ -32722,11 +32705,10 @@ (define-public python-versioneer (invoke "pyflakes" "setup.py" "versioneer.py" "git_version.py") (invoke "python" "test/run_pyflakes_src.py") (invoke "pyflakes" "test") - (invoke "flake8" "git_version.py" "versioneer.py") (invoke "pycodestyle" "--max-line-length=88" "git_version.py" "versioneer.py"))))))) (native-inputs - (list git-minimal python-flake8 python-pycodestyle python-pyflakes + (list git-minimal python-pycodestyle python-pyflakes python-pypa-build python-setuptools python-wheel)) (propagated-inputs (list python-tomli)) @@ -33529,7 +33511,7 @@ (define-public python-jinja2-cli (propagated-inputs (list python-jinja2)) (native-inputs - (list python-flake8 python-jinja2 python-pytest)) + (list python-jinja2 python-pytest)) (home-page "https://github.com/mattrobenolt/jinja2-cli") (synopsis "Command-line interface to Jinja2") (description @@ -35104,7 +35086,6 @@ (define-public nikola python-yapsy)) (native-inputs (list python-coverage - python-flake8 python-freezegun python-pytest python-pytest-cov)) @@ -35576,7 +35557,7 @@ (define-public python-verspec (base32 "07n06wv85fm4vl1ird2mja0823js3x322wgs9gdnq1djjyk4ql64")))) (build-system python-build-system) - (native-inputs (list python-coverage python-flake8 python-mypy + (native-inputs (list python-coverage python-mypy python-pretend python-pytest)) (arguments `(#:phases (modify-phases %standard-phases @@ -35975,7 +35956,7 @@ (define-public python-mike "0yxp816x7s948xsd0fifvq9shg01xdxlifd9rzf5y2rd9iwz3hsn")))) (build-system python-build-system) (native-inputs - (list python-coverage python-flake8 python-shtab)) + (list python-coverage python-shtab)) (propagated-inputs (list python-jinja2 python-mkdocs python-pyyaml python-verspec)) (home-page "https://github.com/jimporter/mike") @@ -35999,7 +35980,6 @@ (define-public python-arpeggio (build-system python-build-system) (native-inputs (list python-coverage python-coveralls - python-flake8 python-mike python-mkdocs python-pytest diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index 99c0a121dde..7831802284f 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -1220,7 +1220,6 @@ (define-public python-dolfin-adjoint (list pkg-config python-coverage python-decorator - python-flake8 python-pkgconfig python-pytest)) (propagated-inputs diff --git a/gnu/packages/sphinx.scm b/gnu/packages/sphinx.scm index 4be9febb96c..ed3fba059d8 100644 --- a/gnu/packages/sphinx.scm +++ b/gnu/packages/sphinx.scm @@ -90,7 +90,6 @@ (define-public python-sphinx python-colorama python-docutils python-filelock - python-flake8 python-html5lib python-imagesize python-importlib-metadata @@ -194,7 +193,6 @@ (define-public python-sphinx-5 python-colorama python-docutils python-filelock - python-flake8 python-html5lib python-imagesize python-importlib-metadata diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index c2dc1cefef3..0a6f61e2280 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -2447,7 +2447,6 @@ (define-public python-statsmodels (native-inputs (list python-colorama python-cython - python-flake8 python-isort python-joblib python-matplotlib diff --git a/gnu/packages/textutils.scm b/gnu/packages/textutils.scm index 9d3b93faf90..bf2da58a3ee 100644 --- a/gnu/packages/textutils.scm +++ b/gnu/packages/textutils.scm @@ -1675,7 +1675,6 @@ (define-public python-panflute (propagated-inputs (list python-click python-pyyaml)) (native-inputs (list python-configparser python-coverage - python-flake8 python-pandocfilters python-pytest python-pytest-cov diff --git a/gnu/packages/vpn.scm b/gnu/packages/vpn.scm index 9da51cb5617..d52d872909d 100644 --- a/gnu/packages/vpn.scm +++ b/gnu/packages/vpn.scm @@ -970,7 +970,6 @@ (define-public sshuttle (native-inputs (list python-setuptools-scm ;; For tests only. - python-flake8 python-mock python-pytest-cov python-pytest-runner)) diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm index a1c94fe13a9..7da18bc821c 100644 --- a/gnu/packages/wm.scm +++ b/gnu/packages/wm.scm @@ -654,7 +654,6 @@ (define-public qtile python-xcffib)) (native-inputs (list pkg-config - python-flake8 python-pep8-naming python-pytest python-pytest-cov From patchwork Sat Jun 1 15:36:38 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28139 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id ACE8D27BBE2; Sat, 1 Jun 2024 16:40:56 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED,URIBL_SBL_A autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id D996727BBEE for ; Sat, 1 Jun 2024 16:40:48 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQps-0000w3-66; Sat, 01 Jun 2024 11:40:00 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpo-0000uB-U0 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:57 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpo-0007hI-M6 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:56 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq0-0003fY-8t for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:08 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 06/32] build-system/pyproject: Remove python-coverage input. 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[arguments]<#:phases>: Adapt 'check phase replacement. * gnu/packages/astronomy.scm (python-asdf-astropy, python-astropy, python-poliastro)[native-inputs]: Remove python-coverage. * gnu/packages/bioinformatics.scm (python-ega-download-client, python-scikit-bio, python-cooler)[native-inputs]: Remove python-coverage. * gnu/packages/check.scm (python-pytest-randomly, python-pytest-flakes, python-aiounittest)[native-inputs]: Remove python-coverage. * gnu/packages/cpp.scm (cpplint)[native-inputs]: Remove python-coverage. * gnu/packages/diffoscope.scm (reprotest)[native-inputs]: Remove python-coverage. * gnu/packages/django.scm (python-django-haystack)[native-inputs]: Remove python-coverage. * gnu/packages/engineering.scm (python-scikit-rf)[native-inputs]: Remove python-coverage. * gnu/packages/geo.scm (python-geopy)[native-inputs]: Remove python-coverage. * gnu/packages/gpodder.scm (gpodder)[native-inputs]: Remove python-coverage. * gnu/packages/graph.scm (python-graphtools, python-pygsp)[native-inputs]: Remove python-coverage. * gnu/packages/jupyter.scm (python-jupyter-packaging)[native-inputs]: Remove python-coverage. * gnu/packages/machine-learning.scm (onnx, onnx-optimizer, python-lightning-utilities, python-pytorch-lightning, python-torchmetrics, python-gpytorch)[native-inputs]: Remove python-coverage. * gnu/packages/music.scm (python-pylast)[native-inputs]: Remove python-coverage. * gnu/packages/package-management.scm (python-anaconda-client, conda)[native-inputs]: Remove python-coverage. * gnu/packages/python-check.scm (python-vcrpy, python-re-assert)[native-inputs]: Remove python-coverage. * gnu/packages/python-compression.scm (python-multivolumefile, python-pybcj, python-bcj-cffi, python-pyppmd, python-ppmd-cffi, python-py7zr)[native-inputs]: Remove python-coverage. * gnu/packages/python-web.scm (python-ovh, python-flask-misaka, python-zope-interface, python-zope-hookable, python-url, python-transaction, python-sanic, python-woob, python-flask-combo-jsonapi)[native-inputs]: Remove python-coverage. * gnu/packages/python-xyz.scm (python-apprise, python-arpeggio, python-affine, python-colorful, python-lunr, python-mdit-py-plugins, python-bidict, python-sh, python-cftime, python-can, python-jsonargparse, python-extension-helpers, python-pyjwt, python-virtualenv-clone, python-lsp-server, python-pikepdf, python-tasklogger, python-notebook, python-structlog, binwalk, python-argcomplete, python-attrs, python-yq, python-stone, python-identify, python-nodeenv, python-anyio, python-forbiddenfruit, python-watchgod, python-eliot, python-pem, python-scikit-build, python-minikanren, nikola, python-verspec, python-mike) [native-inputs]: Remove python-coverage. * gnu/packages/simulation.scm (python-dolfin-adjoint)[native-inputs]: Remove python-coverage. * gnu/packages/statistics.scm (python-emcee, python-rpy2)[native-inputs]: Remove python-coverage. * gnu/packages/syndication.scm (rtv, tuir)[native-inputs]: Remove python-coverage. * gnu/packages/terminals.scm (python-halo, python-log-symbols, python-spinners)[native-inputs]: Remove python-coverage. * gnu/packages/textutils.scm (python-panflute)[native-inputs]: Remove python-coverage. * gnu/packages/version-control.scm (pre-commit)[native-inputs]: Remove python-coverage. * gnu/packages/web.scm (python-httpretty)[native-inputs]: Remove python-coverage. * gnu/packages/xml.scm (python-xmltodict)[native-inputs]: Remove python-coverage. Change-Id: I66b28e624aac94f1a2f6e4fae5cdb444193cd8d9 --- gnu/packages/android.scm | 6 +-- gnu/packages/astronomy.scm | 7 +-- gnu/packages/bioinformatics.scm | 8 ++-- gnu/packages/check.scm | 7 ++- gnu/packages/cpp.scm | 3 +- gnu/packages/diffoscope.scm | 1 - gnu/packages/django.scm | 1 - gnu/packages/engineering.scm | 3 +- gnu/packages/geo.scm | 1 - gnu/packages/gpodder.scm | 3 +- gnu/packages/graph.scm | 3 +- gnu/packages/jupyter.scm | 2 +- gnu/packages/machine-learning.scm | 10 +--- gnu/packages/music.scm | 3 +- gnu/packages/package-management.scm | 6 +-- gnu/packages/python-check.scm | 5 +- gnu/packages/python-compression.scm | 12 ++--- gnu/packages/python-web.scm | 20 ++++---- gnu/packages/python-xyz.scm | 72 +++++++++-------------------- gnu/packages/simulation.scm | 1 - gnu/packages/statistics.scm | 6 +-- gnu/packages/syndication.scm | 4 +- gnu/packages/terminals.scm | 9 ++-- gnu/packages/textutils.scm | 1 - gnu/packages/version-control.scm | 1 - gnu/packages/web.scm | 3 +- gnu/packages/xml.scm | 2 +- 27 files changed, 63 insertions(+), 137 deletions(-) diff --git a/gnu/packages/android.scm b/gnu/packages/android.scm index cbfbd6522f4..ab42f2be980 100644 --- a/gnu/packages/android.scm +++ b/gnu/packages/android.scm @@ -1072,11 +1072,9 @@ (define-public python-androguard (replace 'check ;; Adapted from .travis.yml (lambda _ - (invoke "nosetests" "--with-coverage" "--with-timer" - "--timer-top-n" "50")))))) + (invoke "nosetests" "--with-timer" "--timer-top-n" "50")))))) (native-inputs - (list python-codecov python-coverage python-mock python-nose - python-nose-timer)) + (list python-codecov python-mock python-nose python-nose-timer)) (propagated-inputs (list python-asn1crypto python-colorama diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 02d0726b9be..7589ecbb8ae 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1678,7 +1678,6 @@ (define-public python-astropy (native-inputs (list pkg-config python-colorlog - python-coverage python-cython-3 python-extension-helpers python-h5py @@ -2606,8 +2605,7 @@ (define-public python-poliastro (lambda _ (setenv "HOME" "/tmp")))))) (native-inputs - (list python-coverage - python-hypothesis + (list python-hypothesis python-mypy python-flit-core python-pytest @@ -4955,8 +4953,7 @@ (define-public python-asdf-astropy (add-before 'check 'set-home-env (lambda _ (setenv "HOME" "/tmp")))))) (native-inputs - (list python-coverage - python-h5py + (list python-h5py python-pandas python-pytest python-pytest-astropy diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index aa7f2988191..d8994cf65fa 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2767,8 +2767,7 @@ (define-public python-ega-download-client (propagated-inputs (list python-htsget python-psutil python-requests python-tqdm python-urllib3)) (native-inputs - (list python-coverage - python-mock + (list python-mock python-pyfakefs python-pytest python-responses @@ -5360,7 +5359,7 @@ (define-public python-scikit-bio python-requests python-scipy)) (native-inputs - (list python-coverage python-pytest)) + (list python-pytest)) (home-page "https://scikit-bio.org") (synopsis "Data structures, algorithms and educational resources for bioinformatics") (description @@ -17972,8 +17971,7 @@ (define-public python-cooler python-scipy python-simplejson)) (native-inputs - (list python-coverage - python-hatchling + (list python-hatchling python-isort python-pytest python-pytest-cov)) diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index 880d3cb46f3..b7116b3f0e2 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -1617,8 +1617,7 @@ (define-public python-pytest-randomly "not reordered " "and not test_it_runs_before_stepwise " "and not test_entrypoint_injection")))))))) - (native-inputs (list python-coverage - python-factory-boy + (native-inputs (list python-factory-boy python-faker python-numpy python-pytest-xdist)) @@ -2715,7 +2714,7 @@ (define-public python-pytest-flakes (add-installed-pythonpath inputs outputs) (invoke "py.test" "-vv" "-k" "not test_syntax_error")))))) (native-inputs - (list python-coverage python-pytest python-pytest-pep8)) + (list python-pytest python-pytest-pep8)) (propagated-inputs (list python-pyflakes)) (home-page "https://github.com/fschulze/pytest-flakes") @@ -3568,7 +3567,7 @@ (define-public python-aiounittest #t))))) (propagated-inputs (list python-wrapt)) (native-inputs - (list python-coverage python-nose)) + (list python-nose)) (home-page "https://github.com/kwarunek/aiounittest") (synopsis "Test asyncio code more easily") diff --git a/gnu/packages/cpp.scm b/gnu/packages/cpp.scm index 8a0bd62d6b6..ba2698056da 100644 --- a/gnu/packages/cpp.scm +++ b/gnu/packages/cpp.scm @@ -1189,8 +1189,7 @@ (define-public cpplint (setenv "GUIX_PYTHONPATH" (getenv "TMP_PYTHONPATH"))))))) (native-inputs - (list python-coverage - python-pytest + (list python-pytest python-pytest-cov python-pytest-runner python-testfixtures)) diff --git a/gnu/packages/diffoscope.scm b/gnu/packages/diffoscope.scm index fd2146456d6..67567a6b310 100644 --- a/gnu/packages/diffoscope.scm +++ b/gnu/packages/diffoscope.scm @@ -269,7 +269,6 @@ (define-public reprotest `(("diffoscope" ,diffoscope) ("help2man" ,help2man) ("libfaketime" ,libfaketime) - ("python-coverage" ,python-coverage) ("python-docutils" ,python-docutils) ("python-magic " ,python-magic) ("python-pytest " ,python-pytest) diff --git a/gnu/packages/django.scm b/gnu/packages/django.scm index 4a271eaf0b5..298968d37c6 100644 --- a/gnu/packages/django.scm +++ b/gnu/packages/django.scm @@ -495,7 +495,6 @@ (define-public python-django-haystack (list python-django)) (native-inputs (list gdal - python-coverage python-dateutil python-geopy python-mock diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm index 610fb53087b..2620d5272b6 100644 --- a/gnu/packages/engineering.scm +++ b/gnu/packages/engineering.scm @@ -2678,8 +2678,7 @@ (define-public python-scikit-rf python-pyqtgraph python-qtpy python-scipy)) - (native-inputs (list python-coverage - python-nbval + (native-inputs (list python-nbval python-networkx python-pytest python-pytest-cov diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm index 69cc7e6ddc5..806120e939d 100644 --- a/gnu/packages/geo.scm +++ b/gnu/packages/geo.scm @@ -3264,7 +3264,6 @@ (define-public python-geopy (list python-geographiclib)) (native-inputs (list python-async-generator - python-coverage python-isort python-pytest python-pytest-aiohttp diff --git a/gnu/packages/gpodder.scm b/gnu/packages/gpodder.scm index f9102d3a447..0786010471f 100644 --- a/gnu/packages/gpodder.scm +++ b/gnu/packages/gpodder.scm @@ -64,7 +64,6 @@ (define-public gpodder (build-system python-build-system) (native-inputs (list intltool - python-coverage python-minimock python-pytest python-pytest-cov @@ -173,7 +172,7 @@ (define-public python-mygpoclient "1fi5x6k1mngr0iviw2s4n1f3y2x7pwqy5ivkcrjdprzvwr37f0mh")))) (build-system python-build-system) (native-inputs - (list python-coverage python-minimock python-nose)) + (list python-minimock python-nose)) (arguments `(#:phases (modify-phases %standard-phases diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index eb8aa17fdfe..f83a23dd0be 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -476,7 +476,6 @@ (define-public python-graphtools (native-inputs (list util-linux ;for lscpu python-anndata - python-coverage python-coveralls python-nose python-nose2 @@ -564,7 +563,7 @@ (define-public python-pygsp ""))))))) (propagated-inputs (list python-numpy python-scikit-image python-scipy)) (native-inputs - (list python-coverage python-coveralls python-pytest)) + (list python-coveralls python-pytest)) (home-page "https://github.com/epfl-lts2/pygsp") (synopsis "Graph Signal Processing in Python") (description "The PyGSP is a Python package to ease signal processing on diff --git a/gnu/packages/jupyter.scm b/gnu/packages/jupyter.scm index 9175780b748..6600aab6c6b 100644 --- a/gnu/packages/jupyter.scm +++ b/gnu/packages/jupyter.scm @@ -512,7 +512,7 @@ (define-public python-jupyter-packaging (list python-deprecation python-packaging python-setuptools python-tomlkit python-wheel)) (native-inputs - (list python-pypa-build python-coverage python-pytest + (list python-pypa-build python-pytest python-pytest-cov python-pytest-mock)) (home-page "https://jupyter.org") (synopsis "Jupyter packaging utilities") diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index bf09c9ec4c1..19f73d562e7 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -1364,7 +1364,6 @@ (define args (list cmake googletest pybind11 - python-coverage python-nbval python-pytest python-pytest-runner)) @@ -1443,8 +1442,7 @@ (define-public onnx-optimizer #~(modify-phases #$phases (delete 'relax-requirements))))) (native-inputs - (list cmake python-pytest python-pytest-runner python-nbval - python-coverage)) + (list cmake python-pytest python-pytest-runner python-nbval)) (inputs (list onnx protobuf pybind11)) (propagated-inputs @@ -4487,7 +4485,6 @@ (define-public python-lightning-utilities (build-system python-build-system) (propagated-inputs (list python-importlib-metadata python-packaging python-typing-extensions)) - (native-inputs (list python-coverage)) (home-page "https://github.com/Lightning-AI/utilities") (synopsis "PyTorch Lightning sample project") (description "This package provides common Python utilities and GitHub @@ -4701,7 +4698,6 @@ (define-public python-pytorch-lightning (native-inputs (list python-aiohttp python-cloudpickle - python-coverage python-flaky python-pympler python-pytest @@ -4731,7 +4727,6 @@ (define-public python-torchmetrics python-typing-extensions)) (native-inputs (list python-cloudpickle - python-coverage python-fire python-mir-eval python-mypy @@ -5132,8 +5127,7 @@ (define-public python-gpytorch #~(list "-k" (string-append "not test_deprecated_methods" " and not test_t_matmul_matrix")))) (propagated-inputs (list python-linear-operator python-scikit-learn)) - (native-inputs (list python-coverage - python-flake8-print + (native-inputs (list python-flake8-print python-nbval python-pytest python-setuptools diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm index ad026f5d359..fb9ff038de5 100644 --- a/gnu/packages/music.scm +++ b/gnu/packages/music.scm @@ -4072,8 +4072,7 @@ (define-public python-pylast ;; https://github.com/pylast/pylast/issues/105 (arguments '(#:tests? #f)) (native-inputs - (list python-coverage python-pytest python-flaky python-pyyaml - python-setuptools-scm)) + (list python-pytest python-flaky python-pyyaml python-setuptools-scm)) (home-page "https://github.com/pylast/pylast") (synopsis "Python interface to Last.fm and Libre.fm") (description "A Python interface to Last.fm and other API-compatible diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm index feed16ebcef..4e7e46bf1b3 100644 --- a/gnu/packages/package-management.scm +++ b/gnu/packages/package-management.scm @@ -1100,8 +1100,7 @@ (define-public python-anaconda-client (list python-clyent python-nbformat python-pyyaml python-requests python-setuptools)) (native-inputs - (list python-coverage - python-dateutil + (list python-dateutil python-freezegun python-mock python-pillow @@ -1286,8 +1285,7 @@ (define-public conda ;; XXX: This is dragged in by libarchive and is needed at runtime. zstd)) (native-inputs - (list python-coverage - python-flaky + (list python-flaky python-pytest-timeout python-pytest-xprocess python-wheel)) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index ca87289a1e1..eb48ae3fadf 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -411,8 +411,7 @@ (define-public python-vcrpy (propagated-inputs (list python-pyyaml python-six python-wrapt python-yarl)) (native-inputs - (list python-coverage - python-flake8 + (list python-flake8 python-flask python-httplib2 python-ipaddress @@ -1145,7 +1144,7 @@ (define-public python-re-assert (lambda _ (invoke "pytest" "-vv")))))) (native-inputs - (list python-covdefaults python-coverage python-pytest)) + (list python-covdefaults python-pytest)) (propagated-inputs (list python-regex)) (home-page "https://github.com/asottile/re-assert") diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm index 34a9cd73a20..b2d789c92d0 100644 --- a/gnu/packages/python-compression.scm +++ b/gnu/packages/python-compression.scm @@ -109,7 +109,6 @@ (define-public python-multivolumefile (build-system pyproject-build-system) (native-inputs (list python-setuptools-scm - python-coverage python-coveralls python-hypothesis python-pyannotate @@ -247,8 +246,7 @@ (define-public python-pybcj (build-system pyproject-build-system) (propagated-inputs (list python-importlib-metadata)) (native-inputs - (list python-coverage - python-hypothesis + (list python-hypothesis python-pytest python-pytest-cov python-setuptools-scm @@ -281,8 +279,7 @@ (define-public python-bcj-cffi (propagated-inputs (list python-cffi python-toml python-setuptools-scm)) (native-inputs - (list python-setuptools python-coverage python-pytest - python-pytest-cov)) + (list python-setuptools python-pytest python-pytest-cov)) (home-page "https://github.com/miurahr/bcj-cffi") (synopsis "Branch / Call /Jump CFFI library in Python") (description "This package provides an implementation of the Branch / Call / @@ -407,8 +404,7 @@ (define-public python-pyppmd "03w4x26mar0ha73c3v39psn1i0k6xrzwmaxfsxysic73jz99np07")))) (build-system pyproject-build-system) (native-inputs - (list python-coverage - python-hypothesis + (list python-hypothesis python-pytest python-pytest-benchmark python-pytest-cov @@ -441,7 +437,6 @@ (define-public python-ppmd-cffi (native-inputs (list python-hypothesis python-setuptools-scm - python-coverage python-pytest python-pytest-cov)) (home-page "https://github.com/miurahr/ppmd") @@ -479,7 +474,6 @@ (define-public python-py7zr (list python-setuptools python-wheel python-setuptools-scm - python-coverage python-coveralls python-libarchive-c python-py-cpuinfo diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index ba378088cf8..ffac7968e02 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -977,8 +977,7 @@ (define-public python-ovh (build-system pyproject-build-system) (arguments (list #:tests? #f)) ; XXX: tests require networking (propagated-inputs (list python-requests)) - (native-inputs (list python-coverage - python-isort + (native-inputs (list python-isort python-pytest python-pytest-cov python-setuptools @@ -1857,7 +1856,7 @@ (define-public python-flask-misaka "12gm6hq3lvlj0ddw8p6lk5pky8jk3pw758ihffjl49shnnzc68zl")))) (build-system python-build-system) (native-inputs - (list python-coverage python-mock)) + (list python-mock)) (propagated-inputs (list python-flask python-misaka)) (home-page "https://github.com/singingwolfboy/flask-misaka/") @@ -2996,8 +2995,7 @@ (define-public python-zope-interface (build-system python-build-system) (arguments '(#:tests? #f)) ; test suite can't find python-zope-testing (native-inputs - (list python-coverage python-nose python-zope-event - python-zope-testing)) + (list python-nose python-zope-event python-zope-testing)) (home-page "https://github.com/zopefoundation/zope.interface") (synopsis "Python implementation of the \"design by contract\" methodology") @@ -3290,7 +3288,7 @@ (define-public python-zope-hookable "0hc82lfr7bk53nvbxvjkibkarngyrzgfk2i6bg8wshl0ly0pdl19")))) (build-system python-build-system) (native-inputs - (list python-coverage python-zope-testing)) + (list python-zope-testing)) (home-page "https://github.com/zopefoundation/zope.hookable") (synopsis "Zope hookable") (description "This package supports the efficient creation of hookable @@ -4499,7 +4497,7 @@ (define-public python-url (propagated-inputs (list python-publicsuffix)) (native-inputs - (list python-coverage python-nose)) + (list python-nose)) (arguments `(#:tests? #f)) ; FIXME: tests fail with "ImportError: No module named 'tests'" (home-page "https://github.com/seomoz/url-py") @@ -7168,7 +7166,7 @@ (define-public python-transaction (propagated-inputs (list python-zope-interface)) (native-inputs - (list python-coverage python-mock python-nose)) + (list python-mock python-nose)) (home-page "https://github.com/zopefoundation/transaction") (synopsis "Transaction management for Python") (description "This package contains a generic transaction implementation @@ -7630,7 +7628,6 @@ (define-public python-sanic (list python-bandit python-beautifulsoup4 python-chardet - python-coverage python-cryptography python-docutils python-mypy @@ -8329,7 +8326,7 @@ (define-public python-woob python-six python-unidecode)) (native-inputs - (list python-coverage python-nose python-selenium python-xunitparser)) + (list python-nose python-selenium python-xunitparser)) (home-page "https://woob.tech/") (synopsis "Woob, Web Outside Of Browsers") (description "Woob is a collection of applications able to interact with @@ -8378,8 +8375,7 @@ (define-public python-flask-combo-jsonapi python-simplejson python-six)) (native-inputs - (list python-coverage - python-coveralls + (list python-coveralls python-pytest python-pytest-runner)) (home-page "https://github.com/AdCombo/flask-combo-jsonapi") diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 3ca12d05ee5..b849f6fdaa2 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -318,7 +318,6 @@ (define-public python-apprise python-requests python-requests-oauthlib)) (native-inputs (list python-babel - python-coverage python-cryptography python-paho-mqtt python-pytest @@ -1020,7 +1019,7 @@ (define-public python-affine (base32 "1shyvajayyzbkp9dihb4mz835jnkp0kqqbyjfqci6v43da6q2kd2")))) (build-system pyproject-build-system) - (propagated-inputs (list python-coveralls python-flake8 python-pydocstyle + (propagated-inputs (list python-coveralls python-pydocstyle python-pytest python-pytest-cov)) (native-inputs (list python-flit-core)) (home-page "https://github.com/rasterio/affine") @@ -1182,7 +1181,7 @@ (define-public python-colorful (base32 "0kyy9qhvrb5m9h8xmri7c88i0k1g5qc7017anw39gx44an7mn33y")))) (build-system pyproject-build-system) (native-inputs - (list python-coverage python-pytest python-setuptools python-wheel)) + (list python-pytest python-setuptools python-wheel)) (propagated-inputs (list python-colorama)) (home-page "http://github.com/timofurrer/colorful") @@ -1306,8 +1305,7 @@ (define-public python-lunr '(list "-k" "not TestLanguageSupport" "--ignore-glob=tests/acceptance_tests/*"))) (native-inputs - (list python-coverage - python-hatch-fancy-pypi-readme + (list python-hatch-fancy-pypi-readme python-hatchling python-pytest python-pytest-timeout @@ -1340,8 +1338,7 @@ (define-public python-mdit-py-plugins (list python-markdown-it-py python-attrs)) (native-inputs - (list python-coverage - python-flit-core + (list python-flit-core python-pytest python-pytest-cov python-pytest-regressions)) @@ -2689,8 +2686,7 @@ (define-public python-bidict "02dy0b1k7qlhn7ajyzkrvxhyhjj0hzcq6ws3zjml9hkdz5znz92g")))) (build-system python-build-system) (native-inputs - (list python-coverage - python-hypothesis + (list python-hypothesis python-py python-pytest python-pytest-benchmark @@ -3053,8 +3049,6 @@ (define-public python-sh ;; XXX: A Python 2 test fails when HOME=/homeless-shelter. (setenv "HOME" "/tmp") (invoke "python" "sh.py" "test")))))) - (native-inputs - (list python-coverage)) (home-page "https://github.com/amoffat/sh") (synopsis "Python subprocess replacement") (description "This package provides a replacement for Python's @@ -3076,7 +3070,6 @@ (define-public python-cftime (list python-numpy)) (native-inputs (list python-check-manifest - python-coverage python-coveralls python-cython python-pytest-cov @@ -3581,7 +3574,6 @@ (define-public python-can (native-inputs (list ;; python-canalystii ; Not packed yet python-codecov - python-coverage python-future python-hypothesis python-mock @@ -4519,7 +4511,6 @@ (define-public python-jsonargparse python-typeshed-client)) (native-inputs (list python-attrs - python-coverage python-pycodestyle python-pydantic python-pytest @@ -5047,8 +5038,7 @@ (define-public python-extension-helpers ;; - _pytest.pathlib.ImportPathMismatchError: ('extension_helpers.conftes (arguments (list #:tests? #f)) (native-inputs - (list python-coverage - python-pytest + (list python-pytest python-pytest-astropy python-pytest-cov python-setuptools-scm @@ -6008,8 +5998,7 @@ (define-public python-pyjwt "1z85kwr945rbzrn5wabrsmck5x8disa9wc7b3y5gci7w65z5qa39")))) (build-system pyproject-build-system) (native-inputs - (list python-coverage - python-cryptography + (list python-cryptography python-pytest python-sphinx python-sphinx-rtd-theme @@ -6237,7 +6226,6 @@ (define-public python-virtualenv-clone (native-inputs (list python-pytest python-tox python-virtualenv - python-coverage python-wheel python-tomli python-hypothesis)) @@ -8202,7 +8190,6 @@ (define-public python-lsp-server (native-inputs (list python-autopep8 python-flake8 - python-coverage python-flaky python-matplotlib python-numpy @@ -10222,7 +10209,6 @@ (define-public python-pikepdf (native-inputs (list pybind11 python-attrs - python-coverage python-hypothesis python-setuptools-scm python-psutil @@ -16049,7 +16035,7 @@ (define-public python-tasklogger (base32 "1901mibcp6aiyjy8afnybrxnb0dkbdxlbvjqbr3gginlw7dr18xh")))) (build-system pyproject-build-system) (propagated-inputs (list python-deprecated)) - (native-inputs (list python-coverage python-coveralls python-nose2 + (native-inputs (list python-coveralls python-nose2 python-numpy python-setuptools python-wheel)) (home-page "https://github.com/scottgigante/tasklogger") (synopsis "Extension to the core Python logging library") @@ -17605,8 +17591,7 @@ (define-public python-notebook python-tornado-6 python-traitlets)) (native-inputs - (list python-coverage - python-jupyter-server + (list python-jupyter-server python-nbval python-pytest python-pytest-cov @@ -18367,7 +18352,6 @@ (define-public python-structlog python-hatch-vcs python-hatchling ;; For the tests - python-coverage python-freezegun python-pretend python-pytest @@ -22689,7 +22673,7 @@ (define-public binwalk (lambda _ (setenv "HOME" "")))))) (native-inputs - (list python-coverage python-nose)) + (list python-nose)) (home-page "https://github.com/ReFirmLabs/binwalk") (synopsis "Firmware analysis tool") (description "Binwalk is a tool for analyzing, reverse engineering, and @@ -23273,8 +23257,7 @@ (define-public python-argcomplete "def __disable_test_console_script")) (invoke "python3" "./test/test.py" "-v"))))))) (native-inputs - (list python-coverage - python-pexpect + (list python-pexpect python-setuptools python-setuptools-scm python-wheel @@ -26267,7 +26250,7 @@ (define-public python-yq (inputs (list python-argcomplete python-pyyaml python-xmltodict python-toml jq)) (native-inputs - (list python-coverage python-setuptools-scm python-wheel)) + (list python-setuptools-scm python-wheel)) (home-page "https://github.com/kislyuk/yq") (synopsis "Command-line YAML/XML processor") (description @@ -27336,7 +27319,7 @@ (define-public python-stone (propagated-inputs (list python-ply python-six)) (native-inputs - (list python-coverage python-mock python-pytest python-pytest-runner)) + (list python-mock python-pytest python-pytest-runner)) (home-page "https://github.com/dropbox/stone") (synopsis "Official Api Spec Language for Dropbox") (description @@ -27592,8 +27575,7 @@ (define-public python-identify ;; system-error "utime" "~A" ("No such file or directory") (delete 'ensure-no-mtimes-pre-1980)))) (native-inputs - (list python-coverage python-pytest python-setuptools - python-ukkonen python-wheel)) + (list python-pytest python-setuptools python-ukkonen python-wheel)) (propagated-inputs (list python-editdistance)) (home-page "https://github.com/chriskuehl/identify") @@ -27689,8 +27671,7 @@ (define-public python-nodeenv "not test_smoke" " and not test_smoke_n_system_special_chars")))) (native-inputs - (list python-coverage - python-mock + (list python-mock python-pytest python-setuptools python-wheel)) @@ -30049,7 +30030,6 @@ (define-public python-anyio python-typing-extensions)) (native-inputs (list python-contextlib2 - python-coverage python-hypothesis python-mock python-pytest @@ -30415,7 +30395,7 @@ (define-public python-forbiddenfruit (lambda _ (invoke "make" "SKIP_DEPS=1")))))) (native-inputs - (list python-nose python-coverage)) + (list python-nose)) (home-page "https://github.com/clarete/forbiddenfruit") (synopsis "Patch python built-in objects") (description "This project allows Python code to extend built-in types.") @@ -30593,7 +30573,6 @@ (define-public python-watchgod "-k" "not test_watch_log and not test_awatch"))) (native-inputs (list python-anyio - python-coverage python-pygments python-pytest python-pytest-asyncio @@ -31387,8 +31366,7 @@ (define-public python-eliot (list python-boltons python-pyrsistent python-six python-zope-interface)) (native-inputs - (list python-coverage - python-dask + (list python-dask python-hypothesis python-pytest python-setuptools @@ -31420,7 +31398,6 @@ (define-public python-pem (build-system python-build-system) (native-inputs (list python-certifi - python-coverage python-pretend python-pyopenssl python-pytest @@ -33414,7 +33391,6 @@ (define-public python-scikit-build gfortran git-minimal/pinned ;for tests ninja - python-coverage python-cython python-hatchling python-hatch-fancy-pypi-readme @@ -34141,8 +34117,7 @@ (define-public python-minikanren python-pytest-cov python-pylint python-sympy - python-versioneer - python-coverage)) + python-versioneer)) (propagated-inputs (list python-toolz python-cons python-multipledispatch python-etuples python-logical-unification)) @@ -35085,8 +35060,7 @@ (define-public nikola python-unidecode python-yapsy)) (native-inputs - (list python-coverage - python-freezegun + (list python-freezegun python-pytest python-pytest-cov)) (arguments @@ -35557,8 +35531,7 @@ (define-public python-verspec (base32 "07n06wv85fm4vl1ird2mja0823js3x322wgs9gdnq1djjyk4ql64")))) (build-system python-build-system) - (native-inputs (list python-coverage python-mypy - python-pretend python-pytest)) + (native-inputs (list python-mypy python-pretend python-pytest)) (arguments `(#:phases (modify-phases %standard-phases (replace 'check @@ -35956,7 +35929,7 @@ (define-public python-mike "0yxp816x7s948xsd0fifvq9shg01xdxlifd9rzf5y2rd9iwz3hsn")))) (build-system python-build-system) (native-inputs - (list python-coverage python-shtab)) + (list python-shtab)) (propagated-inputs (list python-jinja2 python-mkdocs python-pyyaml python-verspec)) (home-page "https://github.com/jimporter/mike") @@ -35978,8 +35951,7 @@ (define-public python-arpeggio (base32 "0ggdsck1wpladd5bh9drhkmm86bblgk2wagrhn3sdf4v04wkic6n")))) (build-system python-build-system) - (native-inputs (list python-coverage - python-coveralls + (native-inputs (list python-coveralls python-mike python-mkdocs python-pytest diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index 7831802284f..18d97ae44eb 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -1218,7 +1218,6 @@ (define-public python-dolfin-adjoint (list fenics openmpi pybind11)) (native-inputs (list pkg-config - python-coverage python-decorator python-pkgconfig python-pytest)) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 0a6f61e2280..bfc69062587 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -2396,8 +2396,7 @@ (define-public python-emcee (base32 "1vbz67cwzig28dlndkm6g246p1vcvj6yy2w65z8cdyffigf1j3lf")))) (build-system pyproject-build-system) (propagated-inputs (list python-numpy)) - (native-inputs (list python-coverage - python-pytest + (native-inputs (list python-pytest python-pytest-cov python-setuptools python-setuptools-scm @@ -6777,8 +6776,7 @@ (define-public python-rpy2 python-numpy zlib)) (native-inputs - (list python-coverage - python-ipython + (list python-ipython python-numpy python-pandas python-pytest diff --git a/gnu/packages/syndication.scm b/gnu/packages/syndication.scm index 0f12f94d0bc..397a477972e 100644 --- a/gnu/packages/syndication.scm +++ b/gnu/packages/syndication.scm @@ -435,7 +435,6 @@ (define-public rtv (native-inputs (list ncurses python-coveralls - python-coverage python-mock python-pytest python-vcrpy)) @@ -468,8 +467,7 @@ (define-public tuir (list python-beautifulsoup4 python-decorator python-kitchen python-requests python-six)) (native-inputs - (list python-coverage - python-coveralls + (list python-coveralls python-mock python-pytest python-setuptools diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm index 90dc011a70e..e424e41a222 100644 --- a/gnu/packages/terminals.scm +++ b/gnu/packages/terminals.scm @@ -1197,8 +1197,7 @@ (define-public python-halo (propagated-inputs (list python-colorama python-log-symbols python-six python-spinners python-termcolor)) (native-inputs - (list python-coverage - python-nose + (list python-nose python-setuptools python-tox python-twine @@ -1229,8 +1228,7 @@ (define-public python-log-symbols (("(.*)==(.*)$" _ dep ver) (string-append dep ">=" ver)))))))) (propagated-inputs (list python-colorama)) - (native-inputs (list python-coverage python-nose - python-setuptools python-tox python-wheel)) + (native-inputs (list python-nose python-setuptools python-tox python-wheel)) (home-page "https://github.com/manrajgrover/py-log-symbols") (synopsis "Python library with graphical symbols for logging on the terminal") (description "This package provides a Python library with graphical symbols @@ -1257,8 +1255,7 @@ (define-public python-spinners (substitute* "requirements-dev.txt" (("(.*)==(.*)$" _ dep ver) (string-append dep ">=" ver)))))))) - (native-inputs (list python-coverage python-nose - python-setuptools python-tox python-wheel)) + (native-inputs (list python-nose python-setuptools python-tox python-wheel)) (home-page "https://github.com/manrajgrover/py-spinners") (synopsis "Python library with graphical spinners for the terminal") (description "Spinners is a Python library that contains graphical spinners diff --git a/gnu/packages/textutils.scm b/gnu/packages/textutils.scm index bf2da58a3ee..2c7fd0365ca 100644 --- a/gnu/packages/textutils.scm +++ b/gnu/packages/textutils.scm @@ -1674,7 +1674,6 @@ (define-public python-panflute (build-system python-build-system) (propagated-inputs (list python-click python-pyyaml)) (native-inputs (list python-configparser - python-coverage python-pandocfilters python-pytest python-pytest-cov diff --git a/gnu/packages/version-control.scm b/gnu/packages/version-control.scm index 0016c5bc9b6..1c21f512754 100644 --- a/gnu/packages/version-control.scm +++ b/gnu/packages/version-control.scm @@ -2064,7 +2064,6 @@ (define-public pre-commit (native-inputs (list git-minimal python-covdefaults - python-coverage python-distlib python-pytest python-pytest-env diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm index c29a8b3ca7b..736be82c90b 100644 --- a/gnu/packages/web.scm +++ b/gnu/packages/web.scm @@ -6893,8 +6893,7 @@ (define-public python-httpretty (when tests? (invoke "nosetests"))))))) (native-inputs - (list python-coverage - python-eventlet + (list python-eventlet python-nose python-rednose python-requests diff --git a/gnu/packages/xml.scm b/gnu/packages/xml.scm index 2654f688d4b..1f767ba69b2 100644 --- a/gnu/packages/xml.scm +++ b/gnu/packages/xml.scm @@ -1950,7 +1950,7 @@ (define-public python-xmltodict "08cadlb9vsb4pmzc99lz3a2lx6qcfazyvgk10pcqijvyxlwcdn2h")))) (build-system pyproject-build-system) (native-inputs - (list python-coverage python-nose python-setuptools python-wheel)) + (list python-nose python-setuptools python-wheel)) (home-page "https://github.com/martinblech/xmltodict") (synopsis "Work with XML like you are working with JSON") (description "This package provides a Python library to convert XML to From patchwork Sat Jun 1 15:36:39 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28157 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 84D0727BBEB; Sat, 1 Jun 2024 16:41:29 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 0F0CA27BBEA for ; Sat, 1 Jun 2024 16:41:28 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpx-000116-MY; Sat, 01 Jun 2024 11:40:05 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQps-0000w2-4i for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:00 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpr-0007hO-Su for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:59 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq1-0003g0-HN for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:09 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 07/32] gnu: python-cram: Remove python-coverage native-input. 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[build-system]: Move to pyproject-build-system. [arguments]<#:phases>: Adapt check and patch-source phases to coverage removal. Change-Id: I83fafcdcfbc977f9d3e3411d01d23d9a0e120ec6 --- gnu/packages/python-xyz.scm | 16 ++++------------ 1 file changed, 4 insertions(+), 12 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index b849f6fdaa2..f45f375f38e 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -15086,25 +15086,17 @@ (define-public python-cram ;; causes the line showing the default shell to break into two ;; lines, but the test expects a single line... (("env\\['COLUMNS'\\] = '80'") - "env['COLUMNS'] = '160'")) - - (substitute* "Makefile" - ;; Recent versions of python-coverage have caused the test - ;; coverage to decrease (as of version 0.7). Allow that. - (("--fail-under=100") - "--fail-under=90")) - - #t)) + "env['COLUMNS'] = '160'")))) (replace 'check ;; The test phase uses the built library and executable. (lambda* (#:key inputs outputs #:allow-other-keys) (add-installed-pythonpath inputs outputs) (setenv "PATH" (string-append (getenv "PATH") ":" (assoc-ref outputs "out") "/bin")) - (invoke "make" "test")))))) - (build-system python-build-system) + (invoke "make" "quicktest")))))) + (build-system pyproject-build-system) (native-inputs - (list python-coverage python-setuptools python-wheel which)) + (list python-setuptools python-wheel which)) (synopsis "Simple testing framework for command line applications") (description "Cram is a functional testing framework for command line applications. From patchwork Sat Jun 1 15:36:40 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28155 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 6493427BBE9; Sat, 1 Jun 2024 16:41:22 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id A8EA227BBE2 for ; Sat, 1 Jun 2024 16:41:20 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpt-0000wM-CY; Sat, 01 Jun 2024 11:40:01 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpr-0000uf-RE for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:59 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpq-0007hP-Cy for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:58 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq2-0003gE-2o for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 08/32] gnu: u-boot-tools: Remove python-coverage native-input. 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[arguments]<#:phases>: Adapt patch phase. Change-Id: I94394544079197b4a3f8c53cc0b3d78d1f5dc8be --- gnu/packages/bootloaders.scm | 17 ++++------------- 1 file changed, 4 insertions(+), 13 deletions(-) diff --git a/gnu/packages/bootloaders.scm b/gnu/packages/bootloaders.scm index 0e7bc66bd75..cf568b2bd6a 100644 --- a/gnu/packages/bootloaders.scm +++ b/gnu/packages/bootloaders.scm @@ -802,8 +802,7 @@ (define-public u-boot-tools (name "u-boot-tools") (native-inputs (modify-inputs (package-native-inputs u-boot) - (prepend python-coverage - python-filelock + (prepend python-filelock python-pycryptodomex python-pytest python-pytest-xdist @@ -820,14 +819,6 @@ (define-public u-boot-tools (("/bin/false") (which "false"))) (substitute* "tools/dtoc/fdt_util.py" (("'cc'") "'gcc'")) - (substitute* "tools/u_boot_pylib/test_util.py" - ;; python3-coverage is simply called coverage in guix. - (("python3-coverage") "coverage") - - ;; Don't require 100% coverage since it's brittle and can - ;; fail with newer versions of coverage or dependencies. - (("raise ValueError\\('Test coverage failure'\\)") - "print('Continuing anyway since Guix does not care :O')")) (substitute* "test/run" ;; Make it easier to find test failures. (("#!/bin/bash") "#!/bin/bash -x") @@ -838,9 +829,9 @@ (define-public u-boot-tools ;; FIXME: test_spl fails, needs further investiation (("test_ofplatdata or test_handoff or test_spl") "test_ofplatdata or test_handoff") - ;; FIXME: code coverage not working - (("run_test \"binman code coverage\"") - "# run_test \"binman code coverage\"") + ;; Disable code coverage tests. + (("run_test \"(\\w+) code coverage\"" all) + (string-append "# " all)) ;; This test would require internet access. (("\\./tools/buildman/buildman") (which "true"))) (substitute* "test/py/tests/test_sandbox_exit.py" From patchwork Sat Jun 1 15:36:41 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28152 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 57DA927BBE9; Sat, 1 Jun 2024 16:41:17 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id A16F027BBE2 for ; Sat, 1 Jun 2024 16:41:15 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpt-0000xE-NR; Sat, 01 Jun 2024 11:40:01 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpr-0000vA-E3 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:59 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpr-0007hY-6T for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:59 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq2-0003gT-Sh for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 09/32] gnu: python-aiosqlite: Remove python-coverage native-input. Resent-From: Nicolas Graves Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 01 Jun 2024 15:40:10 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 70858 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 70858@debbugs.gnu.org Cc: ngraves@ngraves.fr Received: via spool by 70858-submit@debbugs.gnu.org id=B70858.171725637913859 (code B ref 70858); Sat, 01 Jun 2024 15:40:10 +0000 Received: (at 70858) by debbugs.gnu.org; 1 Jun 2024 15:39:39 +0000 Received: from localhost ([127.0.0.1]:57152 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpX-0003bO-2s for submit@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:39 -0400 Received: from 3.mo581.mail-out.ovh.net ([46.105.34.113]:46097) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpV-0003ao-Nt for 70858@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:38 -0400 Received: from director3.ghost.mail-out.ovh.net (unknown [10.108.25.35]) by mo581.mail-out.ovh.net (Postfix) with ESMTP id 4Vs40q0yNNz1BVg for <70858@debbugs.gnu.org>; Sat, 1 Jun 2024 15:39:23 +0000 (UTC) Received: from ghost-submission-6684bf9d7b-4rw9s (unknown [10.111.182.240]) by director3.ghost.mail-out.ovh.net (Postfix) with ESMTPS id C9CE91FE40; Sat, 1 Jun 2024 15:39:22 +0000 (UTC) Received: from ngraves.fr ([37.59.142.96]) by ghost-submission-6684bf9d7b-4rw9s with ESMTPSA id 98PzLapAW2ZIcAAAAsWWsg (envelope-from ); Sat, 01 Jun 2024 15:39:22 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-96R00105175cf1-f15e-4231-8c9a-5297e1f3e559, 066A105622CFB65C0C1E9735678F98E7108F9FA5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 Date: Sat, 1 Jun 2024 17:36:41 +0200 Message-ID: <20240601153854.30805-10-ngraves@ngraves.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240601153854.30805-1-ngraves@ngraves.fr> References: <20240601153854.30805-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Ovh-Tracer-Id: 4659818240827253474 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgleduucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffojghfggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepvdehleeiffehtedvlefhffffjeefgfduhfetkeevheeiteduiedugfekuedtheejnecuffhomhgrihhnpehgihhthhhusgdrtghomhenucfkphepuddvjedrtddrtddruddpkedurdeijedrudegiedrvddtkedpfeejrdehledrudegvddrleeinecuvehluhhsthgvrhfuihiivgeptdenucfrrghrrghmpehinhgvthepuddvjedrtddrtddruddpmhgrihhlfhhrohhmpehnghhrrghvvghssehnghhrrghvvghsrdhfrhdpnhgspghrtghpthhtohepuddprhgtphhtthhopeejtdekheekseguvggssghughhsrdhgnhhurdhorhhgpdfovfetjfhoshhtpehmohehkedupdhmohguvgepshhmthhpohhuth X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Nicolas Graves X-ACL-Warn: , Nicolas Graves via Guix-patches X-Patchwork-Original-From: Nicolas Graves via Guix-patches via From: Nicolas Graves Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/databases.scm (python-aiosqlite): [arguments]<#:phases>: Adapt check phase. [native-inputs]: Remove python-coverage. Change-Id: I165d174426022f0603223e3def91ffe280f15899 --- gnu/packages/databases.scm | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 96b2c2a0437..f9202639c53 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -3935,11 +3935,8 @@ (define-public python-aiosqlite (replace 'check (lambda* (#:key tests? #:allow-other-keys) (when tests? - (invoke "python" "-m" "coverage" "run" "-m" - "aiosqlite.tests") - (invoke "python" "-m" "coverage" "report"))))))) + (invoke "python" "-m" "aiosqlite.tests"))))))) (native-inputs (list python-flit-core - python-coverage python-mypy)) (home-page "https://github.com/jreese/aiosqlite") (synopsis From patchwork Sat Jun 1 15:36:42 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28144 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 5C03D27BBE2; Sat, 1 Jun 2024 16:41:03 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 86C9E27BBE9 for ; Sat, 1 Jun 2024 16:40:54 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQps-0000w6-S2; Sat, 01 Jun 2024 11:40:00 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpr-0000v3-7J for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:59 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpq-0007hT-RO for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:58 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq2-0003gL-FJ for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:10 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 10/32] gnu: python-openid: Remove python-coverage native-input. 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[arguments]<#:phases>: Rewrite check phase. Change-Id: Id4ea5abc531f5fd84b60ff22407eb608f1e6ac29 --- gnu/packages/python-web.scm | 17 +++++++++-------- 1 file changed, 9 insertions(+), 8 deletions(-) diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index ffac7968e02..5e585d7b60d 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -2338,17 +2338,18 @@ (define-public python-openid "1bxf9a3ny1js422j962zfzl4a9dhj192pvai05whn7j0iy9gdyrk")))) (build-system python-build-system) (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "coverage" "run" "-m" - "unittest" "openid.test.test_suite"))))))) + (list + #:phases + #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (if tests? + (invoke "python" "-m" "unittest" "openid.test.test_suite") + (format #t "test suite not run~%"))))))) (propagated-inputs (list python-defusedxml)) (native-inputs - (list python-coverage python-psycopg2 python-django)) + (list python-psycopg2 python-django)) (home-page "https://github.com/necaris/python3-openid") (synopsis "OpenID support for servers and consumers") (description "This library provides OpenID authentication for Python, both From patchwork Sat Jun 1 15:36:43 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28151 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 01C3C27BBED; Sat, 1 Jun 2024 16:41:16 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 2EE4F27BBE9 for ; Sat, 1 Jun 2024 16:41:13 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpt-0000xK-Ud; Sat, 01 Jun 2024 11:40:01 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpr-0000vY-Sb for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:59 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpr-0007hf-Kb for guix-patches@gnu.org; Sat, 01 Jun 2024 11:39:59 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq3-0003ga-BJ for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:11 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 11/32] build-system/pyproject: Remove python-coveralls native-input. 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Change-Id: I47b3c21f985175876618f1457b242e6841eb6d3b --- gnu/packages/geo.scm | 3 +-- gnu/packages/graph.scm | 3 +-- gnu/packages/python-compression.scm | 2 -- gnu/packages/python-science.scm | 3 +-- gnu/packages/python-web.scm | 3 +-- gnu/packages/python-xyz.scm | 12 ++++-------- gnu/packages/syndication.scm | 4 +--- gnu/packages/telegram.scm | 3 +-- 8 files changed, 10 insertions(+), 23 deletions(-) diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm index 806120e939d..be96e6800a3 100644 --- a/gnu/packages/geo.scm +++ b/gnu/packages/geo.scm @@ -1479,8 +1479,7 @@ (define-public python-cartopy (inputs (list geos)) (native-inputs - (list python-coveralls - python-cython + (list python-cython python-pytest python-pytest-cov python-pytest-mpl diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index f83a23dd0be..d66a3676fd2 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -476,7 +476,6 @@ (define-public python-graphtools (native-inputs (list util-linux ;for lscpu python-anndata - python-coveralls python-nose python-nose2 python-pandas @@ -563,7 +562,7 @@ (define-public python-pygsp ""))))))) (propagated-inputs (list python-numpy python-scikit-image python-scipy)) (native-inputs - (list python-coveralls python-pytest)) + (list python-pytest)) (home-page "https://github.com/epfl-lts2/pygsp") (synopsis "Graph Signal Processing in Python") (description "The PyGSP is a Python package to ease signal processing on diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm index b2d789c92d0..5faf7b2a3cb 100644 --- a/gnu/packages/python-compression.scm +++ b/gnu/packages/python-compression.scm @@ -109,7 +109,6 @@ (define-public python-multivolumefile (build-system pyproject-build-system) (native-inputs (list python-setuptools-scm - python-coveralls python-hypothesis python-pyannotate python-pytest @@ -474,7 +473,6 @@ (define-public python-py7zr (list python-setuptools python-wheel python-setuptools-scm - python-coveralls python-libarchive-c python-py-cpuinfo python-pyannotate diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index f82feab0963..9301e82bb60 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -653,8 +653,7 @@ (define-public python-trimesh (("\\$MESH_PRE") "'$MESH_PRE'"))))))) (native-inputs - (list python-coveralls - python-pyinstrument + (list python-pyinstrument python-pytest python-pytest-cov)) (propagated-inputs diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 5e585d7b60d..8265ef41aff 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -8376,8 +8376,7 @@ (define-public python-flask-combo-jsonapi python-simplejson python-six)) (native-inputs - (list python-coveralls - python-pytest + (list python-pytest python-pytest-runner)) (home-page "https://github.com/AdCombo/flask-combo-jsonapi") (synopsis "Flask extension to quickly create JSON:API 1.0 REST Web APIs") diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index f45f375f38e..b2a5d234eab 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -1019,7 +1019,7 @@ (define-public python-affine (base32 "1shyvajayyzbkp9dihb4mz835jnkp0kqqbyjfqci6v43da6q2kd2")))) (build-system pyproject-build-system) - (propagated-inputs (list python-coveralls python-pydocstyle + (propagated-inputs (list python-pydocstyle python-pytest python-pytest-cov)) (native-inputs (list python-flit-core)) (home-page "https://github.com/rasterio/affine") @@ -3070,7 +3070,6 @@ (define-public python-cftime (list python-numpy)) (native-inputs (list python-check-manifest - python-coveralls python-cython python-pytest-cov python-sphinx @@ -5678,7 +5677,6 @@ (define-public python-ddlparse (build-system pyproject-build-system) (native-inputs (list python-codecov - python-coveralls python-pytest python-pytest-cov python-setuptools @@ -16027,7 +16025,7 @@ (define-public python-tasklogger (base32 "1901mibcp6aiyjy8afnybrxnb0dkbdxlbvjqbr3gginlw7dr18xh")))) (build-system pyproject-build-system) (propagated-inputs (list python-deprecated)) - (native-inputs (list python-coveralls python-nose2 + (native-inputs (list python-nose2 python-numpy python-setuptools python-wheel)) (home-page "https://github.com/scottgigante/tasklogger") (synopsis "Extension to the core Python logging library") @@ -34103,8 +34101,7 @@ (define-public python-minikanren (invoke "python" "-m" "pytest" "-v" "tests/" "kanren/")) #t))))) (native-inputs - (list python-coveralls - python-pydocstyle + (list python-pydocstyle python-pytest python-pytest-cov python-pylint @@ -35943,8 +35940,7 @@ (define-public python-arpeggio (base32 "0ggdsck1wpladd5bh9drhkmm86bblgk2wagrhn3sdf4v04wkic6n")))) (build-system python-build-system) - (native-inputs (list python-coveralls - python-mike + (native-inputs (list python-mike python-mkdocs python-pytest python-pytest-runner diff --git a/gnu/packages/syndication.scm b/gnu/packages/syndication.scm index 397a477972e..d102548bb9c 100644 --- a/gnu/packages/syndication.scm +++ b/gnu/packages/syndication.scm @@ -434,7 +434,6 @@ (define-public rtv python-requests python-six)) (native-inputs (list ncurses - python-coveralls python-mock python-pytest python-vcrpy)) @@ -467,8 +466,7 @@ (define-public tuir (list python-beautifulsoup4 python-decorator python-kitchen python-requests python-six)) (native-inputs - (list python-coveralls - python-mock + (list python-mock python-pytest python-setuptools python-vcrpy diff --git a/gnu/packages/telegram.scm b/gnu/packages/telegram.scm index 358374a5bb7..c5930180e6a 100644 --- a/gnu/packages/telegram.scm +++ b/gnu/packages/telegram.scm @@ -790,8 +790,7 @@ (define-public tgcli (add-installed-pythonpath inputs outputs) (invoke "pytest" "tests"))))))) (native-inputs - `(("coveralls" ,python-coveralls) - ("pytest" ,python-pytest) + `(("pytest" ,python-pytest) ("pytest-click" ,python-pytest-click) ("pytest-cov" ,python-pytest-cov) ("mkdocs" ,python-mkdocs) From patchwork Sat Jun 1 15:36:44 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28150 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 581B127BBEB; Sat, 1 Jun 2024 16:41:16 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3E3EB27BBED for ; Sat, 1 Jun 2024 16:41:12 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpx-00011j-WB; Sat, 01 Jun 2024 11:40:06 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQps-0000wE-CW for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:00 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQps-0007hq-46 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:00 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq3-0003gi-PA for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:11 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 12/32] build-system/pyproject: Remove python-pycodestyle native-input. Resent-From: Nicolas Graves Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 01 Jun 2024 15:40:11 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 70858 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 70858@debbugs.gnu.org Cc: ngraves@ngraves.fr Received: via spool by 70858-submit@debbugs.gnu.org id=B70858.171725638313883 (code B ref 70858); Sat, 01 Jun 2024 15:40:11 +0000 Received: (at 70858) by debbugs.gnu.org; 1 Jun 2024 15:39:43 +0000 Received: from localhost ([127.0.0.1]:57157 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpb-0003bn-0J for submit@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:43 -0400 Received: from 4.mo584.mail-out.ovh.net ([178.32.98.131]:37067) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpY-0003bb-VF for 70858@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:42 -0400 Received: from director4.ghost.mail-out.ovh.net (unknown [10.108.25.233]) by mo584.mail-out.ovh.net (Postfix) with ESMTP id 4Vs40w4Kdcz1GJy for <70858@debbugs.gnu.org>; Sat, 1 Jun 2024 15:39:28 +0000 (UTC) Received: from ghost-submission-6684bf9d7b-bm5gz (unknown [10.110.178.220]) by director4.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 6BCD11FDBD; Sat, 1 Jun 2024 15:39:28 +0000 (UTC) Received: from ngraves.fr ([37.59.142.101]) by ghost-submission-6684bf9d7b-bm5gz with ESMTPSA id itYoGbBAW2buVhoAxv7ynA (envelope-from ); Sat, 01 Jun 2024 15:39:28 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-101G004176a6e70-d6fc-4842-9640-36d41c0c0546, 066A105622CFB65C0C1E9735678F98E7108F9FA5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 Date: Sat, 1 Jun 2024 17:36:44 +0200 Message-ID: <20240601153854.30805-13-ngraves@ngraves.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240601153854.30805-1-ngraves@ngraves.fr> References: <20240601153854.30805-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Ovh-Tracer-Id: 4661225617685209826 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgleduucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffojghfggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepvdeugfefvdfgkedvkefgueejveduueffhefhjeejvdegvdejgfevudegieegveetnecuffhomhgrihhnpehgihhthhhusgdrtghomhdpthhorhhprhhojhgvtghtrdhorhhgnecukfhppeduvdejrddtrddtrddupdekuddrieejrddugeeirddvtdekpdefjedrheelrddugedvrddutddunecuvehluhhsthgvrhfuihiivgeptdenucfrrghrrghmpehinhgvthepuddvjedrtddrtddruddpmhgrihhlfhhrohhmpehnghhrrghvvghssehnghhrrghvvghsrdhfrhdpnhgspghrtghpthhtohepuddprhgtphhtthhopeejtdekheekseguvggssghughhsrdhgnhhurdhorhhgpdfovfetjfhoshhtpehmohehkeegpdhmohguvgepshhmthhpohhuth X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Nicolas Graves X-ACL-Warn: , Nicolas Graves via Guix-patches X-Patchwork-Original-From: Nicolas Graves via Guix-patches via From: Nicolas Graves Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-science.scm (python-scipy): [native-inputs]: Remove python-pycodestyle. * gnu/packages/python-xyz.scm (python-jsonargparse, python-lsp-server, python-orderedmultidict, python-progressbar2, python-stem) [native-inputs]: Remove python-pycodestyle. Change-Id: I4518bae13aa0e688bc6e0bb40c07082414e8130f --- gnu/packages/python-science.scm | 1 - gnu/packages/python-xyz.scm | 7 ++----- 2 files changed, 2 insertions(+), 6 deletions(-) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 9301e82bb60..e20cb56db9c 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -296,7 +296,6 @@ (define-public python-scipy python-doit python-hypothesis python-pooch - python-pycodestyle python-pydevtool python-pytest python-pytest-cov diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index b2a5d234eab..0b618024383 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -4510,7 +4510,6 @@ (define-public python-jsonargparse python-typeshed-client)) (native-inputs (list python-attrs - python-pycodestyle python-pydantic python-pytest python-pytest-subtests @@ -8180,7 +8179,6 @@ (define-public python-lsp-server python-jedi python-lsp-jsonrpc python-pluggy - python-pycodestyle python-pydocstyle python-ujson python-whatthepatch @@ -9925,7 +9923,7 @@ (define-public python-orderedmultidict (propagated-inputs (list python-six)) (native-inputs - (list python-flake8 python-pycodestyle python-setuptools python-wheel)) + (list python-flake8 python-setuptools python-wheel)) (home-page "https://github.com/gruns/orderedmultidict") (synopsis "Python Ordered Multivalue Dictionary - omdict") (description "This package contains a library for ordered multivalue @@ -18664,7 +18662,6 @@ (define-public python-progressbar2 (list python-six python-utils)) (native-inputs (list python-freezegun - python-pycodestyle python-pytest python-pytest-cache python-pytest-cov @@ -22178,7 +22175,7 @@ (define-public python-stem (invoke "./run_tests.py" "--unit") #t))))) (native-inputs - (list python-mock python-pycodestyle python-pyflakes)) + (list python-mock python-pyflakes)) (home-page "https://stem.torproject.org/") (synopsis "Python controller library that allows applications to interact with Tor") From patchwork Sat Jun 1 15:36:45 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28132 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 05CF627BBEC; Sat, 1 Jun 2024 16:40:33 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,TVD_SPACE_RATIO,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3435A27BBE2 for ; Sat, 1 Jun 2024 16:40:29 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpz-00012J-7p; Sat, 01 Jun 2024 11:40:07 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpt-0000wN-0n for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:01 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQps-0007hx-Nb for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:00 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq4-0003gv-DJ for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:12 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 13/32] gnu: python-versioneer: Remove python-pycodestyle native-input. 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[native-inputs]: Remove python-pycodestyle. Change-Id: Ida3fd1e16cb8656be2af666203a82cb9f6d65f75 --- gnu/packages/python-xyz.scm | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 0b618024383..3f5cac16d45 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -32668,11 +32668,9 @@ (define-public python-versioneer (invoke "python" "setup.py" "make_long_version_py_git") (invoke "pyflakes" "setup.py" "versioneer.py" "git_version.py") (invoke "python" "test/run_pyflakes_src.py") - (invoke "pyflakes" "test") - (invoke "pycodestyle" "--max-line-length=88" - "git_version.py" "versioneer.py"))))))) + (invoke "pyflakes" "test"))))))) (native-inputs - (list git-minimal python-pycodestyle python-pyflakes + (list git-minimal python-pyflakes python-pypa-build python-setuptools python-wheel)) (propagated-inputs (list python-tomli)) From patchwork Sat Jun 1 15:36:46 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28161 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id E63EE27BBE2; Sat, 1 Jun 2024 16:41:33 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,TVD_SPACE_RATIO,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6AB4D27BBEA for ; Sat, 1 Jun 2024 16:41:32 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpx-00010O-3m; Sat, 01 Jun 2024 11:40:05 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpt-0000ww-F0 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:01 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpt-0007i3-5k for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:01 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq4-0003h5-SH for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:12 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 14/32] gnu: python-versioneer: Remove python-pyflakes native-input. Resent-From: Nicolas Graves Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 01 Jun 2024 15:40:12 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 70858 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 70858@debbugs.gnu.org Cc: ngraves@ngraves.fr Received: via spool by 70858-submit@debbugs.gnu.org id=B70858.171725638913941 (code B ref 70858); Sat, 01 Jun 2024 15:40:12 +0000 Received: (at 70858) by debbugs.gnu.org; 1 Jun 2024 15:39:49 +0000 Received: from localhost ([127.0.0.1]:57167 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpg-0003cf-MD for submit@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:49 -0400 Received: from 9.mo575.mail-out.ovh.net ([46.105.78.111]:49909) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpc-0003c0-B4 for 70858@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:45 -0400 Received: from director1.ghost.mail-out.ovh.net (unknown [10.108.2.206]) by mo575.mail-out.ovh.net (Postfix) with ESMTP id 4Vs40z3dF6z1R5f for <70858@debbugs.gnu.org>; Sat, 1 Jun 2024 15:39:31 +0000 (UTC) Received: from ghost-submission-6684bf9d7b-j4q7j (unknown [10.110.96.132]) by director1.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 401171FE60; Sat, 1 Jun 2024 15:39:31 +0000 (UTC) Received: from ngraves.fr ([37.59.142.107]) by ghost-submission-6684bf9d7b-j4q7j with ESMTPSA id NoNZDbNAW2apWAAA6ZtZxQ (envelope-from ); Sat, 01 Jun 2024 15:39:31 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-107S001ae9bc42e-b30d-4edc-800f-8a0e1a6fbe08, 066A105622CFB65C0C1E9735678F98E7108F9FA5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 Date: Sat, 1 Jun 2024 17:36:46 +0200 Message-ID: <20240601153854.30805-15-ngraves@ngraves.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240601153854.30805-1-ngraves@ngraves.fr> References: <20240601153854.30805-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Ovh-Tracer-Id: 4662070039601406690 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgleduucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffojghfggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepvdehleeiffehtedvlefhffffjeefgfduhfetkeevheeiteduiedugfekuedtheejnecuffhomhgrihhnpehgihhthhhusgdrtghomhenucfkphepuddvjedrtddrtddruddpkedurdeijedrudegiedrvddtkedpfeejrdehledrudegvddruddtjeenucevlhhushhtvghrufhiiigvpedtnecurfgrrhgrmhepihhnvghtpeduvdejrddtrddtrddupdhmrghilhhfrhhomhepnhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrpdhnsggprhgtphhtthhopedupdhrtghpthhtohepjedtkeehkeesuggvsggsuhhgshdrghhnuhdrohhrghdpoffvtefjohhsthepmhhoheejhedpmhhouggvpehsmhhtphhouhht X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Nicolas Graves X-ACL-Warn: , Nicolas Graves via Guix-patches X-Patchwork-Original-From: Nicolas Graves via Guix-patches via From: Nicolas Graves Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-xyz.scm (python-versioneer): [arguments]<#:phases>: Remove pyflakes tests. [native-inputs]: Remove python-pyflakes. Change-Id: If2b8ab397f2ad25f73c434d28d8382f13d417f94 --- gnu/packages/python-xyz.scm | 8 ++------ 1 file changed, 2 insertions(+), 6 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 3f5cac16d45..b6260c13f65 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -32665,13 +32665,9 @@ (define-public python-versioneer (invoke "python" "test/git/test_git.py" "-v") ;; Some invocation tests require the network. ;;(invoke "python" "test/git/test_invocations.py" "-v") - (invoke "python" "setup.py" "make_long_version_py_git") - (invoke "pyflakes" "setup.py" "versioneer.py" "git_version.py") - (invoke "python" "test/run_pyflakes_src.py") - (invoke "pyflakes" "test"))))))) + (invoke "python" "setup.py" "make_long_version_py_git"))))))) (native-inputs - (list git-minimal python-pyflakes - python-pypa-build python-setuptools python-wheel)) + (list git-minimal python-pypa-build python-setuptools python-wheel)) (propagated-inputs (list python-tomli)) (home-page "https://github.com/python-versioneer/python-versioneer") From patchwork Sat Jun 1 15:36:47 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28131 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id EEA6727BBE9; Sat, 1 Jun 2024 16:40:11 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5AA9127BBE2 for ; Sat, 1 Jun 2024 16:40:11 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpz-000141-Tc; Sat, 01 Jun 2024 11:40:07 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpt-0000xJ-V0 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:01 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpt-0007iM-JT for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:01 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq5-0003hM-9s for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:13 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 15/32] gnu: python-re-assert: Remove python-covdefaults native-input. 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Change-Id: Ib30c58b69aef7f255e5893ae6f9a33bdf41ac85d --- gnu/packages/python-check.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index eb48ae3fadf..b7ea36cbea7 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -1144,7 +1144,7 @@ (define-public python-re-assert (lambda _ (invoke "pytest" "-vv")))))) (native-inputs - (list python-covdefaults python-pytest)) + (list python-pytest)) (propagated-inputs (list python-regex)) (home-page "https://github.com/asottile/re-assert") From patchwork Sat Jun 1 15:36:48 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28145 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id DC97D27BBEB; Sat, 1 Jun 2024 16:41:07 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 9791727BBE2 for ; Sat, 1 Jun 2024 16:41:05 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpv-0000z7-Mo; Sat, 01 Jun 2024 11:40:03 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpu-0000xl-8h for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:02 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpt-0007ix-Vd for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:01 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq5-0003hU-Ll for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:13 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 16/32] build-system/pyproject: Remove python-codecov native-input. Resent-From: Nicolas Graves Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 01 Jun 2024 15:40:13 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 70858 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 70858@debbugs.gnu.org Cc: ngraves@ngraves.fr Received: via spool by 70858-submit@debbugs.gnu.org id=B70858.171725638913955 (code B ref 70858); Sat, 01 Jun 2024 15:40:13 +0000 Received: (at 70858) by debbugs.gnu.org; 1 Jun 2024 15:39:49 +0000 Received: from localhost ([127.0.0.1]:57171 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQph-0003cv-BZ for submit@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:49 -0400 Received: from 1.mo576.mail-out.ovh.net ([178.33.251.173]:47509) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpd-0003c8-4v for 70858@debbugs.gnu.org; Sat, 01 Jun 2024 11:39:45 -0400 Received: from director5.ghost.mail-out.ovh.net (unknown [10.109.139.212]) by mo576.mail-out.ovh.net (Postfix) with ESMTP id 4Vs4105gfPz1hgQ for <70858@debbugs.gnu.org>; Sat, 1 Jun 2024 15:39:32 +0000 (UTC) Received: from ghost-submission-6684bf9d7b-sn5xd (unknown [10.110.178.103]) by director5.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 98C9B1FE0C; Sat, 1 Jun 2024 15:39:32 +0000 (UTC) Received: from ngraves.fr ([37.59.142.99]) by ghost-submission-6684bf9d7b-sn5xd with ESMTPSA id WHIqJLRAW2aoQQEAW/xDRw (envelope-from ); Sat, 01 Jun 2024 15:39:32 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-99G003606ce87f-e711-485e-9657-1d7c13cb9f47, 066A105622CFB65C0C1E9735678F98E7108F9FA5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 Date: Sat, 1 Jun 2024 17:36:48 +0200 Message-ID: <20240601153854.30805-17-ngraves@ngraves.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240601153854.30805-1-ngraves@ngraves.fr> References: <20240601153854.30805-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Ovh-Tracer-Id: 4662351515216700130 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgledtucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffojghfggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepvdehleeiffehtedvlefhffffjeefgfduhfetkeevheeiteduiedugfekuedtheejnecuffhomhgrihhnpehgihhthhhusgdrtghomhenucfkphepuddvjedrtddrtddruddpkedurdeijedrudegiedrvddtkedpfeejrdehledrudegvddrleelnecuvehluhhsthgvrhfuihiivgeptdenucfrrghrrghmpehinhgvthepuddvjedrtddrtddruddpmhgrihhlfhhrohhmpehnghhrrghvvghssehnghhrrghvvghsrdhfrhdpnhgspghrtghpthhtohepuddprhgtphhtthhopeejtdekheekseguvggssghughhsrdhgnhhurdhorhhgpdfovfetjfhoshhtpehmohehjeeipdhmohguvgepshhmthhpohhuth X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Nicolas Graves X-ACL-Warn: , Nicolas Graves via Guix-patches X-Patchwork-Original-From: Nicolas Graves via Guix-patches via From: Nicolas Graves Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/android.scm (python-androguard)[native-inputs]: Remove python-codecov. * gnu/packages/astronomy.scm (python-wiimatch, python-tweakwcs) [native-inputs]: Remove python-codecov. * gnu/packages/python-check.scm (python-pytest-trio): [arguments]<#:test-flags>: Remove --cov flag. [native-inputs]: Remove python-pytest-cov. * gnu/packages/python-xyz.scm (python-can, python-ddlparse)[native-inputs]: Remove python-codecov. Change-Id: Ic7d3789b3b30d3263f61442bb4e55fd332a4d2f6 --- gnu/packages/android.scm | 2 +- gnu/packages/astronomy.scm | 8 +++----- gnu/packages/python-check.scm | 3 +-- gnu/packages/python-xyz.scm | 4 +--- 4 files changed, 6 insertions(+), 11 deletions(-) diff --git a/gnu/packages/android.scm b/gnu/packages/android.scm index ab42f2be980..7cc1fa4ef05 100644 --- a/gnu/packages/android.scm +++ b/gnu/packages/android.scm @@ -1074,7 +1074,7 @@ (define-public python-androguard (lambda _ (invoke "nosetests" "--with-timer" "--timer-top-n" "50")))))) (native-inputs - (list python-codecov python-mock python-nose python-nose-timer)) + (list python-mock python-nose python-nose-timer)) (propagated-inputs (list python-asn1crypto python-colorama diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 7589ecbb8ae..32fc07d8d86 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -4607,8 +4607,7 @@ (define-public python-tweakwcs python-stsci-imagestats python-stsci-stimage)) (native-inputs - (list python-codecov - python-pytest + (list python-pytest python-pytest-cov python-scipy python-setuptools @@ -5274,9 +5273,8 @@ (define-public python-wiimatch "15kq7z30m9i286ncs9xvpaq3dq1p5fa47jz21prq146qwr7j6dm8")))) (build-system pyproject-build-system) (propagated-inputs (list python-numpy python-scipy python-setuptools)) - (native-inputs (list python-codecov python-pytest python-pytest-cov - python-pytest-doctestplus python-setuptools-scm - python-wheel)) + (native-inputs (list python-pytest python-pytest-cov python-wheel + python-pytest-doctestplus python-setuptools-scm)) (home-page "https://github.com/spacetelescope/wiimatch") (synopsis "Optimal matching of weighted N-dimensional image intensity data") diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index b7ea36cbea7..ed3625421ae 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -1194,7 +1194,7 @@ (define-public python-pytest-trio (arguments (list #:test-flags '(list "-W" "error" "-ra" "-v" "--pyargs" - "pytest_trio" "--verbose" "--cov" "-k" + "pytest_trio" "--verbose" "-k" (string-append ;; Needs network "not test_async_yield_fixture_with_nursery" @@ -1204,7 +1204,6 @@ (define-public python-pytest-trio (native-inputs (list python-hypothesis python-pytest - python-pytest-cov python-setuptools python-wheel)) (propagated-inputs diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index b6260c13f65..446326afc74 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -3572,7 +3572,6 @@ (define-public python-can python-setuptools)) (native-inputs (list ;; python-canalystii ; Not packed yet - python-codecov python-future python-hypothesis python-mock @@ -5675,8 +5674,7 @@ (define-public python-ddlparse (base32 "1nh8m6rxslwk05daxshxmgk41qfp18yynydba49b13l4m8dnh634")))) (build-system pyproject-build-system) (native-inputs - (list python-codecov - python-pytest + (list python-pytest python-pytest-cov python-setuptools python-tox From patchwork Sat Jun 1 15:36:49 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28160 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2627727BBE2; Sat, 1 Jun 2024 16:41:33 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED,URIBL_SBL_A autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 82F6227BBED for ; Sat, 1 Jun 2024 16:41:28 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpx-00010M-3b; Sat, 01 Jun 2024 11:40:05 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpu-0000yc-TL for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:02 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpu-0007jS-Br for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq6-0003hd-27 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:14 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 17/32] build-system/pyproject: Remove python-tox native-input. 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Change-Id: I39dadb40a73ad1c64ba8b9ef9d1b3fe7d1498b5a --- gnu/packages/check.scm | 1 - gnu/packages/diffoscope.scm | 1 - gnu/packages/django.scm | 1 - gnu/packages/logging.scm | 2 +- gnu/packages/messaging.scm | 2 -- gnu/packages/python-check.scm | 1 - gnu/packages/python-web.scm | 2 -- gnu/packages/python-xyz.scm | 27 ++++++++------------------- gnu/packages/radio.scm | 3 +-- gnu/packages/terminals.scm | 5 ++--- 10 files changed, 12 insertions(+), 33 deletions(-) diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index b7116b3f0e2..6042f763f15 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -3675,7 +3675,6 @@ (define-public python-pytest-regressions python-pandas python-pillow python-restructuredtext-lint - python-tox python-setuptools-scm python-pytest)) (home-page "https://github.com/ESSS/pytest-regressions") diff --git a/gnu/packages/diffoscope.scm b/gnu/packages/diffoscope.scm index 67567a6b310..bfe4ce99fdc 100644 --- a/gnu/packages/diffoscope.scm +++ b/gnu/packages/diffoscope.scm @@ -273,7 +273,6 @@ (define-public reprotest ("python-magic " ,python-magic) ("python-pytest " ,python-pytest) ("python-tlsh" ,python-tlsh) - ("python-tox" ,python-tox) ("unzip" ,unzip) ("xxd" ,xxd))) (build-system python-build-system) diff --git a/gnu/packages/django.scm b/gnu/packages/django.scm index 298968d37c6..f5b1e0462bb 100644 --- a/gnu/packages/django.scm +++ b/gnu/packages/django.scm @@ -260,7 +260,6 @@ (define-public python-django-extensions (native-inputs (list python-mock python-factory-boy - python-tox python-pytest python-pytest-cov python-pytest-django diff --git a/gnu/packages/logging.scm b/gnu/packages/logging.scm index a757c22154f..3c593001d00 100644 --- a/gnu/packages/logging.scm +++ b/gnu/packages/logging.scm @@ -134,7 +134,7 @@ (define-public tailon "0xkmrivzilsc9wqr8ms67v7399gxnh7pv5687k4rdpdgz4309fwc")))) (build-system python-build-system) (native-inputs - (list python-tox python-wheel)) + (list python-wheel)) (inputs (list python-pyyaml-5 python-sockjs-tornado python-tornado-http-auth python-tornado python-deepmerge)) diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm index cb72bfb3e25..35ff807e12c 100644 --- a/gnu/packages/messaging.scm +++ b/gnu/packages/messaging.scm @@ -3504,8 +3504,6 @@ (define-public python-harmony (base32 "1bm9xcnzpnpj6rlhbrnl2abwclzl7ivgh1vb5644y9mnhcs489js")))) (build-system python-build-system) - (native-inputs - (list python-tox)) (inputs (list python-librecaptcha python-keyring python-requests)) (synopsis "Discord account management") diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index ed3625421ae..8fd3a8924f1 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -419,7 +419,6 @@ (define-public python-vcrpy python-pytest python-pytest-cov python-pytest-httpbin - python-tox python-urllib3)) (home-page "https://github.com/kevin1024/vcrpy") (synopsis "Automatically mock your HTTP interactions") diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 8265ef41aff..51753adae77 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -2134,7 +2134,6 @@ (define-public python-omnipath python-pytest-socket python-requests-mock python-setuptools-scm - python-tox python-setuptools python-wheel)) (home-page "https://omnipathdb.org/") @@ -7640,7 +7639,6 @@ (define-public python-sanic python-setuptools python-slotscheck python-towncrier - python-tox python-types-ujson python-uvicorn python-wheel)) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 446326afc74..c83146372bf 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -1308,8 +1308,7 @@ (define-public python-lunr (list python-hatch-fancy-pypi-readme python-hatchling python-pytest - python-pytest-timeout - python-tox)) + python-pytest-timeout)) (propagated-inputs (list python-importlib-metadata python-typing-extensions)) (home-page @@ -2695,8 +2694,7 @@ (define-public python-bidict python-sortedcollections python-sortedcontainers python-sphinx - python-sphinx-autodoc-typehints - python-tox)) + python-sphinx-autodoc-typehints)) (arguments `(#:phases (modify-phases %standard-phases (add-after 'unpack 'relax-reqs @@ -4513,7 +4511,6 @@ (define-public python-jsonargparse python-pytest python-pytest-subtests python-responses - python-tox python-types-requests python-setuptools python-wheel)) @@ -5677,7 +5674,6 @@ (define-public python-ddlparse (list python-pytest python-pytest-cov python-setuptools - python-tox python-wheel)) (propagated-inputs (list python-pyparsing)) (home-page "https://github.com/shinichi-takii/ddlparse") @@ -6219,7 +6215,6 @@ (define-public python-virtualenv-clone (delete-file "tox.ini") (invoke "pytest" "-vvv" "tests"))))))) (native-inputs (list python-pytest - python-tox python-virtualenv python-wheel python-tomli @@ -11342,7 +11337,7 @@ (define-public python-honcho (base32 "1y0r8dw4pqcq7r4n58ixjdg1iy60lp0gxsd7d2jmhals16ij71rj")))) (build-system python-build-system) (native-inputs - (list python-pytest python-mock python-tox which)) ;for tests + (list python-pytest python-mock which)) ;for tests (propagated-inputs (list python-jinja2)) (arguments @@ -20129,7 +20124,7 @@ (define-public python-pdfminer-six (propagated-inputs (list python-chardet python-cryptography python-sortedcontainers)) (native-inputs - (list python-nose python-tox)) + (list python-nose)) (home-page "https://github.com/pdfminer/pdfminer.six") (synopsis "PDF parser and analyzer") (description "@code{pdfminer.six} is a community maintained fork of @@ -21276,9 +21271,7 @@ (define-public python-shshsh "1wzqyj1a6jj6cyv5ymzy834qm2lyq80yy1kfz0q0zayq9gm1cj7f")))) (build-system pyproject-build-system) (native-inputs - (list python-poetry-core - python-pytest - python-tox)) + (list python-poetry-core python-pytest)) (home-page "https://github.com/zqqqqz2000/shshsh") (synopsis "Write Shell commands simply and safely within Python") (description "This package provides a way to write Shell commands from @@ -25144,8 +25137,7 @@ (define-public python-marshmallow-jsonapi python-flake8-bugbear python-flask python-mock - python-pytest - python-tox)) + python-pytest)) (home-page "https://github.com/marshmallow-code/marshmallow-jsonapi") (synopsis "JSON:API 1.0 formatting with Marshmallow") (description @@ -25209,7 +25201,6 @@ (define-public python-apispec-webframeworks python-pytest python-pyyaml python-tornado - python-tox python-wheel)) (home-page "https://github.com/marshmallow-code/apispec-webframeworks") (synopsis "Web framework plugins for apispec") @@ -26667,7 +26658,7 @@ (define-public bpython python-watchdog python-jedi)) (native-inputs - (list python-sphinx python-mock python-tox python-wheel)) + (list python-sphinx python-mock python-wheel)) (home-page "https://bpython-interpreter.org/") (synopsis "Fancy interface to the Python interpreter") (description "Bpython is a fancy interface to the Python @@ -32933,7 +32924,6 @@ (define-public python-loguru python-sphinx python-sphinx-autobuild python-sphinx-rtd-theme - python-tox python-setuptools python-wheel)) (home-page "https://github.com/Delgan/loguru") @@ -35290,8 +35280,7 @@ (define-public python-ansicolors (base32 "1q3jqglkq4z0f6nkkn8bswcwqg012i2grrc27kabr8286dg4zycr")))) (build-system python-build-system) (native-inputs - (list python-tox - python-pytest-cov + (list python-pytest-cov unzip)) (home-page "https://github.com/jonathaneunice/colors/") (synopsis "ANSI colors for Python") diff --git a/gnu/packages/radio.scm b/gnu/packages/radio.scm index 56e674a8edc..bfd601564d8 100644 --- a/gnu/packages/radio.scm +++ b/gnu/packages/radio.scm @@ -3171,8 +3171,7 @@ (define-public chirp python-pep8 python-pytest python-pytest-mock - python-pyyaml - python-tox)) + python-pyyaml)) (inputs (list python-future python-importlib-resources diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm index e424e41a222..d61dc6cb3c7 100644 --- a/gnu/packages/terminals.scm +++ b/gnu/packages/terminals.scm @@ -1199,7 +1199,6 @@ (define-public python-halo (native-inputs (list python-nose python-setuptools - python-tox python-twine python-wheel)) (home-page "https://github.com/manrajgrover/halo") @@ -1228,7 +1227,7 @@ (define-public python-log-symbols (("(.*)==(.*)$" _ dep ver) (string-append dep ">=" ver)))))))) (propagated-inputs (list python-colorama)) - (native-inputs (list python-nose python-setuptools python-tox python-wheel)) + (native-inputs (list python-nose python-setuptools python-wheel)) (home-page "https://github.com/manrajgrover/py-log-symbols") (synopsis "Python library with graphical symbols for logging on the terminal") (description "This package provides a Python library with graphical symbols @@ -1255,7 +1254,7 @@ (define-public python-spinners (substitute* "requirements-dev.txt" (("(.*)==(.*)$" _ dep ver) (string-append dep ">=" ver)))))))) - (native-inputs (list python-nose python-setuptools python-tox python-wheel)) + (native-inputs (list python-nose python-setuptools python-wheel)) (home-page "https://github.com/manrajgrover/py-spinners") (synopsis "Python library with graphical spinners for the terminal") (description "Spinners is a Python library that contains graphical spinners From patchwork Sat Jun 1 15:36:50 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28140 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 7290727BBF0; Sat, 1 Jun 2024 16:40:58 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 17C9727BBEA for ; Sat, 1 Jun 2024 16:40:51 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQq0-00014U-5s; Sat, 01 Jun 2024 11:40:08 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpw-0000yf-6H for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:04 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpu-0007jZ-UC for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq6-0003hl-F5 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:14 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 18/32] build-system/pyproject: Remove python-mypy native-input. 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Change-Id: I947656750aa0c7732291d826641736aaefab274e --- gnu/packages/astronomy.scm | 1 - gnu/packages/databases.scm | 1 - gnu/packages/engineering.scm | 2 -- gnu/packages/graphviz.scm | 1 - gnu/packages/machine-learning.scm | 4 ---- gnu/packages/python-science.scm | 1 - gnu/packages/python-web.scm | 5 +---- gnu/packages/python-xyz.scm | 22 +++++++++------------- gnu/packages/serialization.scm | 1 - gnu/packages/virtualization.scm | 3 +-- 10 files changed, 11 insertions(+), 30 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 32fc07d8d86..77bf41b68b9 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2606,7 +2606,6 @@ (define-public python-poliastro (setenv "HOME" "/tmp")))))) (native-inputs (list python-hypothesis - python-mypy python-flit-core python-pytest python-pytest-cov diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index f9202639c53..ad27ec621ca 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -4112,7 +4112,6 @@ (define-public python-psycopg (delete 'sanity-check)))) (native-inputs (list python-cython-3 - python-mypy python-psycopg-pool python-pytest python-pytest-asyncio diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm index 2620d5272b6..af79172e53b 100644 --- a/gnu/packages/engineering.scm +++ b/gnu/packages/engineering.scm @@ -3923,7 +3923,6 @@ (define-public uranium graphviz pkg-config python-pytest - python-mypy python-certifi python-twisted)) (propagated-inputs @@ -4126,7 +4125,6 @@ (define-public cura (build-system qt-build-system) (native-inputs (list python-certifi - python-mypy python-pytest python-requests)) (inputs diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm index b396a97c0bc..ecc2dc2bb4c 100644 --- a/gnu/packages/graphviz.scm +++ b/gnu/packages/graphviz.scm @@ -218,7 +218,6 @@ (define-public python-uqbar (native-inputs (list graphviz python-isort - python-mypy python-pytest python-pytest-cov python-setuptools diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 19f73d562e7..686cd726e37 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -1920,7 +1920,6 @@ (define-public python-imbalanced-learn (propagated-inputs (list python-joblib python-numpy python-scikit-learn python-scipy python-threadpoolctl)) (native-inputs (list python-keras - python-mypy python-pandas python-pytest python-pytest-cov @@ -4521,7 +4520,6 @@ (define-public python-captum python-flask-compress python-ipython python-ipywidgets - python-mypy python-parameterized python-pytest python-pytest-cov @@ -4729,7 +4727,6 @@ (define-public python-torchmetrics (list python-cloudpickle python-fire python-mir-eval - python-mypy python-pandas python-psutil python-pytest @@ -5055,7 +5052,6 @@ (define-public python-pyro-ppl python-isort python-lap python-matplotlib - python-mypy python-nbformat python-nbsphinx python-nbstripout diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index e20cb56db9c..567fa5d1559 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -273,7 +273,6 @@ (define-public python-scipy '()) (list python-matplotlib python-mpmath - python-mypy python-numpy python-numpydoc python-pydata-sphinx-theme diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 51753adae77..db815812299 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -196,7 +196,6 @@ (define-public python-huggingface-hub python-fastapi python-jedi python-jinja2 - python-mypy python-numpy python-pillow python-pydantic @@ -717,7 +716,7 @@ (define-public python-asgiref (when tests? (invoke "pytest" "-vv"))))))) (native-inputs - (list python-mypy python-pytest python-pytest-asyncio)) + (list python-pytest python-pytest-asyncio)) (propagated-inputs (list python-typing-extensions)) (home-page "https://github.com/django/asgiref/") @@ -8963,7 +8962,6 @@ (define-public python-starsessions-for-pytorch-lightning python-starlette-for-fastapi-0.88)) (native-inputs (list python-httpx - python-mypy python-poetry-core python-pytest python-pytest-asyncio @@ -9009,7 +9007,6 @@ (define-public python-fastapi python-hatchling python-isort python-jose - python-mypy python-passlib python-peewee python-pytest diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index c83146372bf..963747bb06a 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -3020,7 +3020,7 @@ (define-public python-pyls-black (propagated-inputs (list python-black python-lsp-server python-toml python-tomli)) (native-inputs - (list python-isort python-mypy python-pytest + (list python-isort python-pytest python-pytest-runner python-setuptools python-wheel)) (home-page "https://github.com/rupert/pyls-black") (synopsis "Black plugin for the Python Language Server") @@ -6785,7 +6785,7 @@ (define-public kalamine ;; TODO: Add python-pytest-ruff to native-inputs once it has been ;; packaged. (native-inputs - (list python-hatchling python-mypy python-pytest)) + (list python-hatchling python-pytest)) (home-page "https://github.com/OneDeadKey/kalamine") (synopsis "Keyboard layout maker") (description @@ -8002,8 +8002,7 @@ (define-public python-pydantic-cli (propagated-inputs (list python-pydantic)) (native-inputs - (list python-mypy - python-pytest)) + (list python-pytest)) (home-page "https://github.com/mpkocher/pydantic-cli") (synopsis "Turn Pydantic defined data models into CLI tools") (description @@ -23461,6 +23460,8 @@ (define-public python-duckdb (list #:test-flags '(list "--ignore=tests/slow/test_h2oai_arrow.py" + ;; stubs require mypy and don't actually check functionality. + "--ignore=tests/stubs/test_stubs.py" ;; Don't install anything, thank you. "-k" "not test_install_non_existent_extension") #:phases @@ -23485,7 +23486,6 @@ (define-public python-duckdb (list pybind11 python-fsspec python-google-cloud-storage - python-mypy python-numpy python-pandas python-psutil @@ -25107,7 +25107,6 @@ (define-public python-marshmallow (list python-packaging)) (native-inputs (list python-flake8-bugbear - python-mypy python-pytest python-pytz python-simplejson @@ -25169,7 +25168,6 @@ (define-public python-apispec (native-inputs (list python-flake8-bugbear python-marshmallow - python-mypy python-pytest python-pyyaml python-setuptools @@ -26586,8 +26584,7 @@ (define-public python-typeguard ;; XXX: These fail when installed as a library: ;; https://github.com/agronholm/typeguard/issues/176 "not usefixtures and not test_cached_module"))))))) - (native-inputs (list python-mypy - python-pytest + (native-inputs (list python-pytest python-setuptools-scm python-typing-extensions)) (home-page "https://github.com/agronholm/typeguard") @@ -29057,8 +29054,7 @@ (define-public python-trio-typing (native-inputs (list python-attrs python-pytest python-setuptools python-wheel)) (propagated-inputs - (list python-mypy python-mypy-extensions python-trio - python-typing-extensions)) + (list python-mypy-extensions python-trio python-typing-extensions)) (home-page "https://github.com/python-trio/trio-typing") (synopsis "Static type checking support for Trio and related projects") (description @@ -35498,7 +35494,7 @@ (define-public python-verspec (base32 "07n06wv85fm4vl1ird2mja0823js3x322wgs9gdnq1djjyk4ql64")))) (build-system python-build-system) - (native-inputs (list python-mypy python-pretend python-pytest)) + (native-inputs (list python-pretend python-pytest)) (arguments `(#:phases (modify-phases %standard-phases (replace 'check @@ -36245,7 +36241,7 @@ (define-public python-catalogue "0srdxiil2xys8q1gpc1nvzhvis3a33d8a7amk2i1rlpbg6p36pak")))) (build-system python-build-system) (native-inputs (list python-pytest)) - (inputs (list python python-zipp python-typing-extensions python-mypy)) + (inputs (list python python-zipp python-typing-extensions)) (home-page "https://github.com/explosion/catalogue") (synopsis "Lightweight function registries for your library") (description diff --git a/gnu/packages/serialization.scm b/gnu/packages/serialization.scm index 728d6404bb9..b39ce176502 100644 --- a/gnu/packages/serialization.scm +++ b/gnu/packages/serialization.scm @@ -719,7 +719,6 @@ (define-public python-msgspec (native-inputs (list python-attrs python-gcovr python-msgpack - python-mypy python-pytest python-setuptools-scm python-versioneer diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm index 85ad5031059..1a75ae0a09e 100644 --- a/gnu/packages/virtualization.scm +++ b/gnu/packages/virtualization.scm @@ -2809,8 +2809,7 @@ (define-public python-transient python-requests python-toml)) (native-inputs - (list python-mypy - python-pyhamcrest + (list python-pyhamcrest python-setuptools python-twine python-wheel)) From patchwork Sat Jun 1 15:36:51 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28141 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 8A2BF27BBF1; Sat, 1 Jun 2024 16:40:59 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 4018627BBF2 for ; Sat, 1 Jun 2024 16:40:55 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpy-00012h-GG; Sat, 01 Jun 2024 11:40:06 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpv-0000zI-NR for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:03 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpv-0007jf-Ew for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq7-0003ht-43 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:15 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 19/32] gnu: python-immutables: Remove python-mypy native-input. 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[build-system]: Move to pyrpoject-build-system. [native-inputs]: Remove python-mypy. [arguments]<#:phases>: Add phase to remove python-mypy native-input. Change-Id: Ie67f634ffecbc3711f354e915b2fab54a1639925 --- gnu/packages/python-xyz.scm | 17 +++++++++++++---- 1 file changed, 13 insertions(+), 4 deletions(-) diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 963747bb06a..180158e3b64 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -15824,13 +15824,22 @@ (define-public python-immutables (version "0.18") (source (origin - (method url-fetch) - (uri (pypi-uri "immutables" version)) + (method git-fetch) + (uri (git-reference + (url "https://github.com/MagicStack/immutables") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) (sha256 - (base32 "1x4cinh0xbl6p6p2yfm2s07mxxy3lf0zzai9gqpydk4482bwfdjk")))) + (base32 "1xjbkgls0dqrvpg4yzkdzz6aayizxcv5chjc5gyynk196wyshw4m")))) (build-system pyproject-build-system) + (arguments + (list #:phases #~(modify-phases %standard-phases + (add-after 'unpack 'remove-mypy-dependency + (lambda _ + (delete-file "tests/test_mypy.py") + (delete-file "tests/conftest.py")))))) (native-inputs - (list python-mypy python-pytest python-setuptools python-wheel)) + (list python-pytest python-setuptools python-wheel)) (home-page "https://github.com/MagicStack/immutables") (synopsis "High-performance immutable mapping type for Python") (description From patchwork Sat Jun 1 15:36:52 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28137 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 7692B27BBF1; Sat, 1 Jun 2024 16:40:50 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 83A4527BBEA for ; Sat, 1 Jun 2024 16:40:42 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQpy-00013G-Ph; Sat, 01 Jun 2024 11:40:06 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpw-0000zi-4n for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:04 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpv-0007jk-Rd for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq7-0003i0-IA for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:15 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 20/32] build-system/pyproject: Remove python-isort native-input. 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Change-Id: I6dc9a49cdbb10ddd33ea32854f891312d3a29e53 --- gnu/packages/bioinformatics.scm | 2 -- gnu/packages/databases.scm | 1 - gnu/packages/django.scm | 2 +- gnu/packages/finance.scm | 1 - gnu/packages/geo.scm | 1 - gnu/packages/gettext.scm | 1 - gnu/packages/graphviz.scm | 1 - gnu/packages/machine-learning.scm | 4 +--- gnu/packages/mail.scm | 3 +-- gnu/packages/protobuf.scm | 2 +- gnu/packages/python-check.scm | 1 - gnu/packages/python-web.scm | 4 +--- gnu/packages/python-xyz.scm | 7 ++----- gnu/packages/sphinx.scm | 2 -- gnu/packages/statistics.scm | 1 - gnu/packages/virtualization.scm | 1 - 16 files changed, 7 insertions(+), 27 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index d8994cf65fa..366caec31fd 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -17972,7 +17972,6 @@ (define-public python-cooler python-simplejson)) (native-inputs (list python-hatchling - python-isort python-pytest python-pytest-cov)) ;; Almost all the projects of the Mirnylab are moved under Open2C umbrella @@ -21816,7 +21815,6 @@ (define-public scvelo (propagated-inputs (list python-anndata python-hnswlib - python-isort python-igraph python-loompy python-louvain diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index ad27ec621ca..9ec7855109c 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -3251,7 +3251,6 @@ (define-public aerich (list poetry python-bandit python-cryptography - python-isort python-pydantic python-pytest python-pytest-asyncio diff --git a/gnu/packages/django.scm b/gnu/packages/django.scm index f5b1e0462bb..48b1b38a97f 100644 --- a/gnu/packages/django.scm +++ b/gnu/packages/django.scm @@ -387,7 +387,7 @@ (define-public python-django-taggit (lambda _ (invoke "python3" "-m" "django" "test" "--settings=tests.settings")))))) (propagated-inputs - (list python-django python-isort)) + (list python-django)) (native-inputs (list python-pytest python-mock)) (home-page diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm index 7579001dd1f..6f70d61f700 100644 --- a/gnu/packages/finance.scm +++ b/gnu/packages/finance.scm @@ -1149,7 +1149,6 @@ (define-public python-trezor python-typing-extensions)) (native-inputs ; Only needed for running the tests (list protobuf - python-isort python-pillow python-protobuf python-pyqt diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm index be96e6800a3..73644ab2bb4 100644 --- a/gnu/packages/geo.scm +++ b/gnu/packages/geo.scm @@ -3263,7 +3263,6 @@ (define-public python-geopy (list python-geographiclib)) (native-inputs (list python-async-generator - python-isort python-pytest python-pytest-aiohttp python-readme-renderer diff --git a/gnu/packages/gettext.scm b/gnu/packages/gettext.scm index bbb19bd4cb8..39215a0ccb6 100644 --- a/gnu/packages/gettext.scm +++ b/gnu/packages/gettext.scm @@ -216,7 +216,6 @@ (define-public mdpo (list python-bump2version python-flake8-implicit-str-concat python-flake8-print - python-isort python-pytest python-pytest-cov python-sphinx diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm index ecc2dc2bb4c..f6a58943ecb 100644 --- a/gnu/packages/graphviz.scm +++ b/gnu/packages/graphviz.scm @@ -217,7 +217,6 @@ (define-public python-uqbar and not test_sphinx_book_text_broken_strict"))) (native-inputs (list graphviz - python-isort python-pytest python-pytest-cov python-setuptools diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 686cd726e37..bec948a4bfd 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -175,8 +175,7 @@ (define-public python-funsor (propagated-inputs (list python-makefun python-multipledispatch python-numpy python-opt-einsum python-typing-extensions)) - (native-inputs (list python-isort - python-nbsphinx + (native-inputs (list python-nbsphinx python-pandas python-pillow python-pyro-api @@ -5049,7 +5048,6 @@ (define-public python-pyro-ppl (list ninja jupyter python-graphviz - python-isort python-lap python-matplotlib python-nbformat diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm index 5743558e76b..7c4b6f2cb26 100644 --- a/gnu/packages/mail.scm +++ b/gnu/packages/mail.scm @@ -3724,7 +3724,6 @@ (define-public python-hyperkitty (native-inputs (list python-beautifulsoup4 python-elasticsearch - python-isort python-lxml python-mock python-whoosh)) @@ -3763,7 +3762,7 @@ (define-public postorius (list python-readme-renderer python-mailmanclient python-django python-django-mailman3)) (native-inputs - (list python-beautifulsoup4 python-isort python-mock python-vcrpy)) + (list python-beautifulsoup4 python-mock python-vcrpy)) (home-page "https://gitlab.com/mailman/postorius") (synopsis "Web user interface for GNU Mailman") (description diff --git a/gnu/packages/protobuf.scm b/gnu/packages/protobuf.scm index 502ad09a3a6..9c4d56bd384 100644 --- a/gnu/packages/protobuf.scm +++ b/gnu/packages/protobuf.scm @@ -469,7 +469,7 @@ (define-public python-pure-protobuf (base32 "15dp5pvazd0jx4wzzh79080ah7hkpd3axh40al9vhzs2hf3v90hx")))) (build-system python-build-system) (native-inputs - (list python-pytest python-pytest-cov python-isort)) + (list python-pytest python-pytest-cov)) (arguments `(#:phases (modify-phases %standard-phases diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index 8fd3a8924f1..1087f7b9168 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -1495,7 +1495,6 @@ (define-public python-pytest-toolbox (native-inputs (list python-pydantic python-pytest - python-pytest-isort python-setuptools python-wheel)) (home-page "https://github.com/samuelcolvin/pytest-toolbox") diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index db815812299..a040eb81448 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -976,8 +976,7 @@ (define-public python-ovh (build-system pyproject-build-system) (arguments (list #:tests? #f)) ; XXX: tests require networking (propagated-inputs (list python-requests)) - (native-inputs (list python-isort - python-pytest + (native-inputs (list python-pytest python-pytest-cov python-setuptools python-sphinx @@ -9005,7 +9004,6 @@ (define-public python-fastapi (native-inputs (list python-databases python-flask python-hatchling - python-isort python-jose python-passlib python-peewee diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 180158e3b64..4538dccd84c 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -478,7 +478,6 @@ (define-public python-jupytext python-autopep8 python-flake8 python-gitpython - python-isort python-ipython-genutils python-jupyter-server python-pyaml @@ -3020,7 +3019,7 @@ (define-public python-pyls-black (propagated-inputs (list python-black python-lsp-server python-toml python-tomli)) (native-inputs - (list python-isort python-pytest + (list python-pytest python-pytest-runner python-setuptools python-wheel)) (home-page "https://github.com/rupert/pyls-black") (synopsis "Black plugin for the Python Language Server") @@ -4242,7 +4241,6 @@ (define-public python-eventlet python-hatchling python-hatch-vcs python-pytest - python-isort python-twine)) (arguments (list @@ -12914,7 +12912,6 @@ (define-public python-textdistance #t))))) (native-inputs (list python-hypothesis - python-isort python-numpy python-pytest python-pytest-runner @@ -25046,7 +25043,7 @@ (define-public python-validators (propagated-inputs (list python-decorator python-six)) (native-inputs - (list python-isort python-pytest)) + (list python-pytest)) (home-page "https://github.com/kvesteri/validators") (synopsis "Data validation library") (description diff --git a/gnu/packages/sphinx.scm b/gnu/packages/sphinx.scm index ed3fba059d8..26ee93b3aaf 100644 --- a/gnu/packages/sphinx.scm +++ b/gnu/packages/sphinx.scm @@ -93,7 +93,6 @@ (define-public python-sphinx python-html5lib python-imagesize python-importlib-metadata - python-isort python-jinja2 python-mypy python-packaging @@ -196,7 +195,6 @@ (define-public python-sphinx-5 python-html5lib python-imagesize python-importlib-metadata - python-isort python-jinja2 python-mypy python-packaging diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index bfc69062587..de4fb6e3aa7 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -2446,7 +2446,6 @@ (define-public python-statsmodels (native-inputs (list python-colorama python-cython - python-isort python-joblib python-matplotlib python-pytest diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm index 1a75ae0a09e..b0b71cceaf5 100644 --- a/gnu/packages/virtualization.scm +++ b/gnu/packages/virtualization.scm @@ -2031,7 +2031,6 @@ (define-public python-qemu-qmp (native-inputs (list python-avocado-framework python-flake8 - python-isort python-pylint python-setuptools python-setuptools-scm From patchwork Sat Jun 1 15:36:53 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28143 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 3F4FE27BBEB; Sat, 1 Jun 2024 16:41:01 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED,URIBL_SBL_A autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 60EA027BBED for ; Sat, 1 Jun 2024 16:40:57 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQq2-00017K-Uu; Sat, 01 Jun 2024 11:40:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpx-000118-MP for guix-patches@gnu.org; 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Change-Id: Ie9ff17126810dc3e2b17ad42a1f765361401eae7 --- gnu/packages/gettext.scm | 1 - gnu/packages/machine-learning.scm | 6 ++---- gnu/packages/python-check.scm | 2 +- gnu/packages/python-web.scm | 2 +- gnu/packages/python-xyz.scm | 6 +----- gnu/packages/terminals.scm | 1 - gnu/packages/virtualization.scm | 1 - 7 files changed, 5 insertions(+), 14 deletions(-) diff --git a/gnu/packages/gettext.scm b/gnu/packages/gettext.scm index 39215a0ccb6..b3c807c6774 100644 --- a/gnu/packages/gettext.scm +++ b/gnu/packages/gettext.scm @@ -221,7 +221,6 @@ (define-public mdpo python-sphinx python-sphinx-argparse python-sphinx-rtd-theme - python-twine python-yamllint)) (propagated-inputs (list python-polib python-pymd4c)) diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index bec948a4bfd..27749093ee5 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -5094,8 +5094,7 @@ (define-public python-linear-operator (native-inputs (list python-flake8-print python-pytest python-setuptools - python-setuptools-scm - python-twine)) + python-setuptools-scm)) (home-page "https://github.com/cornellius-gp/linear_operator/") (synopsis "Linear operator implementation") (description "LinearOperator is a PyTorch package for abstracting away the @@ -5124,8 +5123,7 @@ (define-public python-gpytorch (native-inputs (list python-flake8-print python-nbval python-pytest - python-setuptools - python-twine)) + python-setuptools)) (home-page "https://gpytorch.ai") (synopsis "Implementation of Gaussian Processes in PyTorch") (description diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index 1087f7b9168..d2618807bc7 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -245,7 +245,7 @@ (define-public python-testfixtures (native-inputs (list python-pytest python-pytest-cov ;;("python-pytest-django" ,python-pytest-django) - python-twine python-wheel)) + python-wheel)) (synopsis "Tests components for Python") (description "Testfixtures is a collection of helpers and mock objects that are useful when writing automated tests in Python.") diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index a040eb81448..08be81ad1c5 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -6224,7 +6224,7 @@ (define-public python-translation-finder (list python-chardet python-pathlib2 python-ruamel.yaml python-six)) (native-inputs (list python-codecov python-codacy-coverage python-pytest-cov - python-pytest-runner python-twine)) + python-pytest-runner)) (home-page "https://weblate.org/") (synopsis "Translation file finder for Weblate") (description "This package provides a function to find translation file in diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 4538dccd84c..9396290401d 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -3070,7 +3070,6 @@ (define-public python-cftime python-cython python-pytest-cov python-sphinx - python-twine python-wheel)) (home-page "https://unidata.github.io/cftime/") (synopsis "Library for time handling") @@ -4240,8 +4239,7 @@ (define-public python-eventlet (list python-black python-hatchling python-hatch-vcs - python-pytest - python-twine)) + python-pytest)) (arguments (list #:test-flags @@ -31351,7 +31349,6 @@ (define-public python-eliot python-sphinx python-sphinx-rtd-theme python-testtools - python-twine python-twisted)) (home-page "https://github.com/itamarst/eliot/") (synopsis "Eliot: the logging system that tells you why it happened") @@ -35924,7 +35921,6 @@ (define-public python-arpeggio python-mkdocs python-pytest python-pytest-runner - python-twine python-wheel)) (home-page "https://github.com/textX/Arpeggio") (synopsis "Packrat parser interpreter for Python") diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm index d61dc6cb3c7..d39d1347a2c 100644 --- a/gnu/packages/terminals.scm +++ b/gnu/packages/terminals.scm @@ -1199,7 +1199,6 @@ (define-public python-halo (native-inputs (list python-nose python-setuptools - python-twine python-wheel)) (home-page "https://github.com/manrajgrover/halo") (synopsis "Python library to display graphical spinners in the terminal") diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm index b0b71cceaf5..16919ccee51 100644 --- a/gnu/packages/virtualization.scm +++ b/gnu/packages/virtualization.scm @@ -2810,7 +2810,6 @@ (define-public python-transient (native-inputs (list python-pyhamcrest python-setuptools - python-twine python-wheel)) (home-page "https://github.com/ALSchwalm/transient") (synopsis "QEMU Wrapper written in Python") From patchwork Sat Jun 1 15:36:54 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28147 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 09CAE27BBE2; Sat, 1 Jun 2024 16:41:10 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED,URIBL_SBL_A autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6901A27BBED for ; Sat, 1 Jun 2024 16:41:01 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQqi-0001wd-Pp; Sat, 01 Jun 2024 11:40:52 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQqh-0001tI-29 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:51 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQqg-0008B0-Gt for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:50 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQqs-0003lH-6d for guix-patches@gnu.org; Sat, 01 Jun 2024 11:41:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 22/32] build-system/pyproject: Remove python-pytest-cov native-input. 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gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgleduucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucgoufhushhpvggtthffohhmrghinhculdegledmnecujfgurhephffvvefufffkofgjfhgggfestdekredtredttdenucfhrhhomheppfhitgholhgrshcuifhrrghvvghsuceonhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrqeenucggtffrrghtthgvrhhnpeefjeetfeefveehteefudeiuefgfefgvdehvdeuveeufeekueevtefgvdeludehheenucffohhmrghinheprghsthhrohhmlhdrohhrghdpghhithhhuhgsrdgtohhmpdhtohhrshhiohhnrdhorhhgpdgsihhomhdqfhhorhhmrghtrdhorhhgpdhmrghtthhshhhirhhlvgihrdgtohhmpdgsihhtsghutghkvghtrdhorhhgpdhstghikhhithdqrhhfrdhorhhgpdhjuhhphihtvghrrdhorhhgpdhstghikhhithdqthgurgdrohhrghdpphihghdrohhrghdptggrphhtuhhmrdgrihdprhgvrgguthhhvgguohgtshdrihhopdhstghiphihrdhorhhgpdhphihthhhonhdqhhihphgvrhdrohhrghdpghhithhlrggsrdgtohhmpdhphihlohhnshhprhhojhgvtghtrdhorhhgpdhphihthhhonhdqiigvvghprdhorhhgpdhphihpihdrohhrghdpghhithhhuhgsrdhiohdpphihuggrthgrrdhorhhgpdhiphihthhhohhnrdhorhhgpdhstghivghnthhifhhitg 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python-casa-formats-io, python-cdflib, python-czml3, python-poliastro, python-tweakwcs, python-wiimatch, python-stcal)[native-inputs]: Remove python-pytest-cov. * gnu/packages/audio.scm (python-pysox)[native-inputs]: Remove python-pytest-cov. * gnu/packages/backup.scm (borgmatic)[native-inputs]: Remove python-pytest-cov. * gnu/packages/bioinformatics.scm (python-biom-format, python-pyfaidx, python-cooler, python-screed)[native-inputs]: Remove python-pytest-cov. * gnu/packages/build-tools.scm (meson-python)[native-inputs]: Remove python-pytest-cov. * gnu/packages/check.scm (python-pytest-nunit, python-pytest-timeout, python-pytest-enabler, python-pytest-perf, python-pyhamcrest)[native-inputs]: Remove python-pytest-cov. * gnu/packages/cpp.scm (cpplint)[native-inputs]: Remove python-pytest-cov. * gnu/packages/databases.scm (python-alembic)[native-inputs]: Remove python-pytest-cov. * gnu/packages/dav.scm (vdirsyncer, radicale)[native-inputs]: Remove python-pytest-cov. * gnu/packages/django.scm (python-django-extensions)[native-inputs]: Remove python-pytest-cov. * gnu/packages/embedded.scm (mbed-tools)[native-inputs]: Remove python-pytest-cov. * gnu/packages/engineering.scm (python-scikit-rf)[native-inputs]: Remove python-pytest-cov. * gnu/packages/fontutils.scm (psautohint)[native-inputs]: Remove python-pytest-cov. * gnu/packages/geo.scm (python-fiona, python-cartopy)[native-inputs]: Remove python-pytest-cov. * gnu/packages/gettext.scm (mdpo)[native-inputs]: Remove python-pytest-cov. * gnu/packages/graphviz.scm (python-graphviz, python-uqbar) [native-inputs]: Remove python-pytest-cov. * gnu/packages/jupyter.scm (python-jupyter-packaging, python-jupyter-server, python-jupyterlite-core, python-ipydatawidgets) [native-inputs]: Remove python-pytest-cov. * gnu/packages/machine-learning.scm (python-persim, python-scikit-learn-extra, python-imbalanced-learn, python-keras-application, python-keras-preprocessing, python-keras, python-tensorly, python-pytorch-geometric, python-captum, python-torchmetrics, python-pyro-ppl)[native-inputs]: Remove python-pytest-cov. * gnu/packages/mastodon.scm (python-mastodon-py)[native-inputs]: Remove python-pytest-cov. * gnu/packages/messaging.scm (zulip-term)[native-inputs]: Remove python-pytest-cov. * gnu/packages/package-management.scm (python-conda-package-handling): [native-inputs]: Remove python-pytest-cov. * gnu/packages/patchutils.scm (pwclient)[native-inputs]: Remove python-pytest-cov. * gnu/packages/protobuf.scm (python-pure-protobuf)[native-inputs]: Remove python-pytest-cov. * gnu/packages/python-check.scm (python-testfixtures, python-vcrpy, python-pytest-filter-subpackage, python-atpublic, python-sybil, python-vulture)[native-inputs]: Remove python-pytest-cov. * gnu/packages/python-compression.scm (python-multivolumefile, python-pybcj, python-bcj-cffi, python-pyppmd, python-ppmd-cffi, python-py7zr)[native-inputs]: Remove python-pytest-cov. * gnu/packages/python-crypto.scm (python-trustme)[native-inputs]: Remove python-pytest-cov. (python-certauth)[native-inputs]: Remove python-pytest-cov. Add python-pytest. * gnu/packages/python-science.scm (python-scipy, python-trimesh, python-pandaparallel, python-pyts, python-usetplot, python-pingouin, python-opt-einsum, python-salib)[native-inputs]: Remove python-pytest-cov. * gnu/packages/python-web.scm (python-apiron, python-huggingface-hub, python-portend, python-aiosignal, python-aiostream, python-ovh, python-cbor2, python-httplib2, python-cheroot, parfive, python-jose, python-pyscss, python-mechanicalsoup, python-priority, hypercorn, python-aioftp, python-oauthlib, python-tinycss, python-cssselect2, python-httpcore, python-wsgiprox, python-venusian, python-cloud-init, python-siosocks, python-zeep, gunicorn)[native-inputs]: Remove python-pytest-cov. (python-warcio)[native-inputs]: Remove python-pytest-cov. Add python-pytest. * gnu/packages/python-xyz.scm (python-apprise, python-janus, python-logbook, python-affine, python-mdit-py-plugins, python-pint, python-rasterio, python-bidict, python-can, dosage, python-contourpy, python-portalocker, python-extension-helpers, python-mizani, python-cligj, python-ddlparse, python-robotframework-pythonlibcore, python-lsp-server, python-sparse, python-pikepdf, python-imageio, python-manimpango, python-importlib-resources, python-jaraco-classes, python-jaraco-collections, python-jaraco-context, python-jaraco-functools, python-jaraco-test, python-jaraco-text, python-ipyparallel, python-three-merge, python-seaborn, python-sentry-sdk, python-sniffio, python-get-version, python-legacy-api-wrap, python-path, python-pip-run, python-debugpy, python-notebook, python-ipywidgets, python-qstylizer, python-cookiecutter, python-pyqtgraph, python-codespell, python-inflect, python-lazy-loader, python-pymemcache, python-natsort, python-mwclient, python-flasgger, python-tempora, python-outcome, python-trio, python-apscheduler, python-iocapture, python-argh, python-flit, python-watchdog, python-watchgod, python-cmd2, python-inform, python-qtsass, python-scikit-build, python-minikanren, python-tablib, nikola, python-ansicolors, python-shtab, python-scooby, dynaconf, python-pyan3, python-numpydoc, python-loguru, python-multidict)[native-inputs]: Remove python-pytest-cov. * gnu/packages/sphinx.scm (python-sphinx-gallery)[native-inputs]: Remove python-pytest-cov. * gnu/packages/statistics.scm (python-pymc, python-emcee, python-rpy2)[native-inputs]: Remove python-pytest-cov. * gnu/packages/task-management.scm (todoman)[native-inputs]: Remove python-pytest-cov. * gnu/packages/textutils.scm (python-panflute)[native-inputs]: Remove python-pytest-cov. * gnu/packages/time.scm (python-arrow, python-tzlocal)[native-inputs]: Remove python-pytest-cov. * gnu/packages/vpn.scm (sshuttle)[native-inputs]: Remove python-pytest-cov. * gnu/packages/web.scm (anonip, python-tibanna)[native-inputs]: Remove python-pytest-cov. * gnu/packages/wm.scm (qtile)[native-inputs]: Remove python-pytest-cov. Add python-coverage. Change-Id: Ia8c96b18a60b6ceb00b345ef06351eae1a68e070 --- gnu/packages/astronomy.scm | 10 +-- gnu/packages/audio.scm | 2 +- gnu/packages/backup.scm | 2 +- gnu/packages/bioinformatics.scm | 9 +-- gnu/packages/build-tools.scm | 1 - gnu/packages/check.scm | 8 +- gnu/packages/cpp.scm | 1 - gnu/packages/databases.scm | 2 +- gnu/packages/dav.scm | 2 - gnu/packages/django.scm | 1 - gnu/packages/embedded.scm | 1 - gnu/packages/engineering.scm | 1 - gnu/packages/fontutils.scm | 1 - gnu/packages/geo.scm | 3 +- gnu/packages/gettext.scm | 1 - gnu/packages/graphviz.scm | 2 - gnu/packages/jupyter.scm | 7 +- gnu/packages/machine-learning.scm | 19 ++--- gnu/packages/mastodon.scm | 1 - gnu/packages/messaging.scm | 4 +- gnu/packages/package-management.scm | 1 - gnu/packages/patchutils.scm | 2 +- gnu/packages/protobuf.scm | 2 +- gnu/packages/python-check.scm | 11 +-- gnu/packages/python-compression.scm | 9 +-- gnu/packages/python-crypto.scm | 3 +- gnu/packages/python-science.scm | 16 ++-- gnu/packages/python-web.scm | 59 ++++---------- gnu/packages/python-xyz.scm | 121 +++++++--------------------- gnu/packages/sphinx.scm | 1 - gnu/packages/statistics.scm | 6 +- gnu/packages/task-management.scm | 1 - gnu/packages/textutils.scm | 1 - gnu/packages/time.scm | 2 - gnu/packages/vpn.scm | 1 - gnu/packages/web.scm | 3 +- gnu/packages/wm.scm | 1 - 37 files changed, 84 insertions(+), 234 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 77bf41b68b9..1510ecab6de 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -601,7 +601,7 @@ (define-public python-astroml (setenv "HOME" "/tmp")))))) (propagated-inputs (list python-astropy python-matplotlib python-numpy python-scikit-learn python-scipy)) - (native-inputs (list python-pytest-astropy-header python-pytest-cov + (native-inputs (list python-pytest-astropy-header python-pytest python-pytest-doctestplus python-pytest-remotedata python-setuptools python-wheel)) (home-page "https://astroml.org") @@ -2041,7 +2041,6 @@ (define-public python-casa-formats-io (invoke "python" "setup.py" "build_ext" "--inplace")))))) (native-inputs (list python-pytest - python-pytest-cov python-pytest-openfiles python-setuptools)) (propagated-inputs @@ -2113,7 +2112,6 @@ (define-public python-cdflib (list python-astropy python-hypothesis python-pytest - python-pytest-cov python-pytest-remotedata python-setuptools-scm python-xarray @@ -2230,7 +2228,6 @@ (define-public python-czml3 (native-inputs (list python-astropy python-pytest - python-pytest-cov python-pytest-mypy python-setuptools python-wheel)) @@ -2608,7 +2605,6 @@ (define-public python-poliastro (list python-hypothesis python-flit-core python-pytest - python-pytest-cov python-pytest-doctestplus python-pytest-mpl python-pytest-mypy)) @@ -3388,7 +3384,6 @@ (define-public python-stcal (list python-cython-3 python-psutil python-pytest - python-pytest-cov python-pytest-doctestplus python-setuptools-scm python-setuptools @@ -4607,7 +4602,6 @@ (define-public python-tweakwcs python-stsci-stimage)) (native-inputs (list python-pytest - python-pytest-cov python-scipy python-setuptools python-setuptools-scm)) @@ -5272,7 +5266,7 @@ (define-public python-wiimatch "15kq7z30m9i286ncs9xvpaq3dq1p5fa47jz21prq146qwr7j6dm8")))) (build-system pyproject-build-system) (propagated-inputs (list python-numpy python-scipy python-setuptools)) - (native-inputs (list python-pytest python-pytest-cov python-wheel + (native-inputs (list python-pytest python-wheel python-pytest-doctestplus python-setuptools-scm)) (home-page "https://github.com/spacetelescope/wiimatch") (synopsis diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm index e6d16211fd4..724430dae36 100644 --- a/gnu/packages/audio.scm +++ b/gnu/packages/audio.scm @@ -6197,7 +6197,7 @@ (define-public python-pysox (propagated-inputs (list python-numpy python-typing-extensions)) (native-inputs - (list sox python-pytest python-pytest-cov python-soundfile)) + (list sox python-pytest python-soundfile)) (home-page "https://github.com/rabitt/pysox") (synopsis "Python wrapper around SoX") (description "@code{python-pysox} is a wrapper around the @command{sox} diff --git a/gnu/packages/backup.scm b/gnu/packages/backup.scm index 663eb2568fe..566ea06338b 100644 --- a/gnu/packages/backup.scm +++ b/gnu/packages/backup.scm @@ -1357,7 +1357,7 @@ (define-public borgmatic python-jsonschema python-requests python-ruamel.yaml)) - (native-inputs (list python-flexmock python-pytest python-pytest-cov)) + (native-inputs (list python-flexmock python-pytest)) (home-page "https://torsion.org/borgmatic/") (synopsis "Simple, configuration-driven backup software") (description diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 366caec31fd..84e03a65e1f 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3011,7 +3011,7 @@ (define-public python-biom-format ;;python-scikit-bio ;mutually recursive dependency python-scipy)) (native-inputs - (list python-cython python-pytest python-pytest-cov python-nose)) + (list python-cython python-pytest python-nose)) (home-page "https://www.biom-format.org") (synopsis "Biological Observation Matrix (BIOM) format utilities") (description @@ -10188,7 +10188,7 @@ (define-public python-screed (base32 "0slva743xn93h4sl5zg2as4ricnnj5pp6nw9dm4qclk4i9xglkvk")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest-cov + (list python-pytest python-pytest-runner python-setuptools python-wheel)) @@ -17921,7 +17921,6 @@ (define-public python-pyfaidx python-mock python-numpy python-pytest - python-pytest-cov python-wheel)) (propagated-inputs (list python-setuptools)) (home-page "http://mattshirley.com") @@ -17971,9 +17970,7 @@ (define-public python-cooler python-scipy python-simplejson)) (native-inputs - (list python-hatchling - python-pytest - python-pytest-cov)) + (list python-hatchling python-pytest)) ;; Almost all the projects of the Mirnylab are moved under Open2C umbrella (home-page "https://github.com/open2c/cooler") (synopsis "Sparse binary format for genomic interaction matrices") diff --git a/gnu/packages/build-tools.scm b/gnu/packages/build-tools.scm index 8fec2f8e2f2..29974dfd8b6 100644 --- a/gnu/packages/build-tools.scm +++ b/gnu/packages/build-tools.scm @@ -376,7 +376,6 @@ (define-public meson-python python-cython python-gitpython python-pytest - python-pytest-cov python-pytest-mock)) (home-page "https://github.com/mesonbuild/meson-python") (synopsis "Meson-based build backend for Python") diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index 6042f763f15..6b16ec7711b 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -1530,7 +1530,7 @@ (define-public python-pytest-nunit (build-system pyproject-build-system) (arguments (list #:tests? #false)) ;no tests included (propagated-inputs (list python-attrs python-pytest)) - (native-inputs (list python-pytest python-pytest-cov python-setuptools + (native-inputs (list python-pytest python-setuptools python-wheel python-xmlschema)) (home-page "https://github.com/pytest-dev/pytest-nunit") (synopsis "Pytest plugin for generating NUnit3 test result XML output") @@ -1796,7 +1796,7 @@ (define-public python-pytest-timeout (add-installed-pythonpath inputs outputs) (invoke "pytest" "-vv")))))) (propagated-inputs - (list python-pytest python-pytest-cov)) + (list python-pytest)) (native-inputs (list python-pexpect)) (home-page "https://github.com/pytest-dev/pytest-timeout") @@ -2493,7 +2493,6 @@ (define-public python-pytest-enabler (native-inputs (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-flake8 python-pytest-mypy python-setuptools @@ -2667,7 +2666,6 @@ (define-public python-pytest-perf (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-flake8 python-pytest-mypy @@ -3242,7 +3240,7 @@ (define-public python-pyhamcrest (base32 "05kdzlhs2kvj82pfca13qszszcj6dyrk4b9pbr46x06sq2s4qyls")))) (native-inputs ;all native inputs are for tests - (list python-pytest-cov python-mock python-pytest python-hypothesis)) + (list python-mock python-pytest python-hypothesis)) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases diff --git a/gnu/packages/cpp.scm b/gnu/packages/cpp.scm index ba2698056da..9c693fb16c3 100644 --- a/gnu/packages/cpp.scm +++ b/gnu/packages/cpp.scm @@ -1190,7 +1190,6 @@ (define-public cpplint (getenv "TMP_PYTHONPATH"))))))) (native-inputs (list python-pytest - python-pytest-cov python-pytest-runner python-testfixtures)) (home-page "https://github.com/cpplint/cpplint") diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 9ec7855109c..8abea7ec385 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -3763,7 +3763,7 @@ (define-public python-alembic (base32 "0lxi2g2025lz5k7k5dd5fc1lfijqi2yw6qqyjzp073z6laa8cckw")))) (build-system pyproject-build-system) (native-inputs - (list python-mock python-pytest-cov)) + (list python-mock python-pytest)) (propagated-inputs (list python-dateutil python-sqlalchemy python-mako python-editor)) (home-page "https://bitbucket.org/zzzeek/alembic") diff --git a/gnu/packages/dav.scm b/gnu/packages/dav.scm index b30b1ef5a59..0612a72c831 100644 --- a/gnu/packages/dav.scm +++ b/gnu/packages/dav.scm @@ -58,7 +58,6 @@ (define-public radicale (build-system python-build-system) (native-inputs (list python-pytest - python-pytest-cov python-pytest-flake8 python-pytest-isort python-pytest-runner @@ -146,7 +145,6 @@ (define-public vdirsyncer python-trustme python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-httpserver radicale)) (inputs diff --git a/gnu/packages/django.scm b/gnu/packages/django.scm index 48b1b38a97f..3ab2bc139d1 100644 --- a/gnu/packages/django.scm +++ b/gnu/packages/django.scm @@ -261,7 +261,6 @@ (define-public python-django-extensions (list python-mock python-factory-boy python-pytest - python-pytest-cov python-pytest-django python-shortuuid)) (home-page diff --git a/gnu/packages/embedded.scm b/gnu/packages/embedded.scm index 1da41415194..542895c8779 100644 --- a/gnu/packages/embedded.scm +++ b/gnu/packages/embedded.scm @@ -1798,7 +1798,6 @@ (define-public mbed-tools (invoke "pytest" "-vv"))))))) (native-inputs (list python-pytest - python-pytest-cov python-factory-boy python-requests-mock python-semver)) diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm index af79172e53b..eaff8546dc4 100644 --- a/gnu/packages/engineering.scm +++ b/gnu/packages/engineering.scm @@ -2681,7 +2681,6 @@ (define-public python-scikit-rf (native-inputs (list python-nbval python-networkx python-pytest - python-pytest-cov python-pytest-mock python-pyvisa)) (home-page "https://scikit-rf.org/") diff --git a/gnu/packages/fontutils.scm b/gnu/packages/fontutils.scm index 84eb33d19bf..46b06765f0c 100644 --- a/gnu/packages/fontutils.scm +++ b/gnu/packages/fontutils.scm @@ -856,7 +856,6 @@ (define-public psautohint (native-inputs (list psautohint-font-data python-pytest - python-pytest-cov python-pytest-xdist python-setuptools-scm python-setuptools diff --git a/gnu/packages/geo.scm b/gnu/packages/geo.scm index 73644ab2bb4..a33de4bd669 100644 --- a/gnu/packages/geo.scm +++ b/gnu/packages/geo.scm @@ -935,7 +935,7 @@ (define-public python-fiona (list gdal ; for gdal-config python-boto3 python-cython - python-pytest python-pytest-cov python-pytz)) + python-pytest python-pytz)) (home-page "https://github.com/Toblerity/Fiona") (synopsis "Fiona reads and writes spatial data files") @@ -1481,7 +1481,6 @@ (define-public python-cartopy (native-inputs (list python-cython python-pytest - python-pytest-cov python-pytest-mpl python-pytest-xdist python-setuptools diff --git a/gnu/packages/gettext.scm b/gnu/packages/gettext.scm index b3c807c6774..d239dea20a4 100644 --- a/gnu/packages/gettext.scm +++ b/gnu/packages/gettext.scm @@ -217,7 +217,6 @@ (define-public mdpo python-flake8-implicit-str-concat python-flake8-print python-pytest - python-pytest-cov python-sphinx python-sphinx-argparse python-sphinx-rtd-theme diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm index f6a58943ecb..44ff4dc20d4 100644 --- a/gnu/packages/graphviz.scm +++ b/gnu/packages/graphviz.scm @@ -159,7 +159,6 @@ (define-public python-graphviz graphviz python-mock python-pytest - python-pytest-cov python-pytest-mock python-setuptools python-wheel)) @@ -218,7 +217,6 @@ (define-public python-uqbar (native-inputs (list graphviz python-pytest - python-pytest-cov python-setuptools python-wheel)) (propagated-inputs diff --git a/gnu/packages/jupyter.scm b/gnu/packages/jupyter.scm index 6600aab6c6b..1745cd1f491 100644 --- a/gnu/packages/jupyter.scm +++ b/gnu/packages/jupyter.scm @@ -512,8 +512,7 @@ (define-public python-jupyter-packaging (list python-deprecation python-packaging python-setuptools python-tomlkit python-wheel)) (native-inputs - (list python-pypa-build python-pytest - python-pytest-cov python-pytest-mock)) + (list python-pypa-build python-pytest python-pytest-mock)) (home-page "https://jupyter.org") (synopsis "Jupyter packaging utilities") (description "This package provides tools to help build and install @@ -681,7 +680,6 @@ (define-public python-jupyterlite-core (native-inputs (list python-ansi2html python-hatchling python-pytest-console-scripts - python-pytest-cov python-pytest-xdist python-tornado-6)) (home-page "https://github.com/jupyterlite/jupyterlite") @@ -1081,8 +1079,7 @@ (define-public python-ipydatawidgets (native-inputs (list python-jupyter-packaging python-nbval - python-pytest - python-pytest-cov)) + python-pytest)) (home-page "https://github.com/vidartf/ipydatawidgets") (synopsis "Widgets to help facilitate reuse of large datasets across widgets") (description diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 27749093ee5..a3c598ba1c8 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -926,8 +926,7 @@ (define-public python-persim python-numpy python-scikit-learn python-scipy)) - (native-inputs (list python-pytest python-pytest-cov python-setuptools - python-wheel)) + (native-inputs (list python-pytest python-setuptools python-wheel)) (home-page "https://persim.scikit-tda.org") (synopsis "Tools for analyzing persistence diagrams in Python") (description @@ -1796,7 +1795,7 @@ (define-public python-scikit-learn-extra python-scikit-learn python-scipy python-packaging)) - (native-inputs (list python-pytest python-pytest-cov python-cython + (native-inputs (list python-pytest python-cython python-setuptools python-wheel)) (home-page "https://github.com/scikit-learn-contrib/scikit-learn-extra") (synopsis "Set of tools for scikit-learn") @@ -1921,7 +1920,6 @@ (define-public python-imbalanced-learn (native-inputs (list python-keras python-pandas python-pytest - python-pytest-cov python-setuptools python-wheel tensorflow)) @@ -3659,8 +3657,7 @@ (define-public python-keras-applications (propagated-inputs (list python-h5py python-numpy)) (native-inputs - (list python-pytest python-pytest-cov python-pytest-pep8 - python-pytest-xdist)) + (list python-pytest python-pytest-pep8 python-pytest-xdist)) (home-page "https://github.com/keras-team/keras-applications") (synopsis "Reference implementations of popular deep learning models") (description @@ -3686,7 +3683,6 @@ (define-public python-keras-preprocessing (list python-pandas python-pillow python-pytest - python-pytest-cov python-pytest-xdist tensorflow)) (home-page "https://github.com/keras-team/keras-preprocessing/") @@ -3828,7 +3824,6 @@ (define-public python-keras python-markdown python-pandas python-pytest - python-pytest-cov python-pytest-pep8 python-pytest-timeout python-pytest-xdist @@ -3924,7 +3919,7 @@ (define-public python-tensorly ;; nor is examples/plot_quantum.py " and not test_file_is_generated")))) (propagated-inputs (list python-jsmin python-numpy python-scipy)) - (native-inputs (list python-pytest python-pytest-cov python-sphinx + (native-inputs (list python-pytest python-sphinx python-setuptools python-wheel)) (home-page "https://github.com/tensorly/tensorly") (synopsis "Tensor learning in Python") @@ -4432,8 +4427,7 @@ (define-public python-pytorch-geometric python-tqdm)) (native-inputs (list python-flit-core - python-pytest - python-pytest-cov)) + python-pytest)) (home-page "https://pyg.org") (synopsis "Graph Neural Network library for PyTorch") (description @@ -4521,7 +4515,6 @@ (define-public python-captum python-ipywidgets python-parameterized python-pytest - python-pytest-cov python-scikit-learn python-setuptools)) (home-page "https://captum.ai") @@ -4729,7 +4722,6 @@ (define-public python-torchmetrics python-pandas python-psutil python-pytest - python-pytest-cov python-pytest-doctestplus python-pytest-rerunfailures python-pytest-timeout @@ -5058,7 +5050,6 @@ (define-public python-pyro-ppl python-pillow python-pypandoc python-pytest - python-pytest-cov python-pytest-xdist python-scikit-learn python-scipy diff --git a/gnu/packages/mastodon.scm b/gnu/packages/mastodon.scm index b8006292cab..670a47ad821 100644 --- a/gnu/packages/mastodon.scm +++ b/gnu/packages/mastodon.scm @@ -179,7 +179,6 @@ (define-public python-mastodon-py python-cryptography python-http-ece python-pytest - python-pytest-cov python-pytest-mock python-pytest-runner python-pytest-vcr diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm index 35ff807e12c..1fd2ce391cf 100644 --- a/gnu/packages/messaging.scm +++ b/gnu/packages/messaging.scm @@ -3213,7 +3213,6 @@ (define-public zulip-term (modules '((guix build utils))) (snippet '(substitute* "setup.py" (("\\=\\=1\\.7") ">=1.7") ; pytest-mock - (("\\=\\=2\\.5") ">=2.5") ; pytest-cov (("4\\.5\\.2") "4.4.2"))))) ; lxml (build-system pyproject-build-system) (arguments @@ -3226,8 +3225,7 @@ (define-public zulip-term python-urwid-readline python-zulip)) (native-inputs - (list python-distro python-pytest python-pytest-cov - python-pytest-mock)) + (list python-distro python-pytest python-pytest-mock)) (home-page "https://github.com/zulip/zulip-terminal") (synopsis "Zulip's official terminal client") (description "This package contains Zulip's official terminal client.") diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm index 4e7e46bf1b3..2659fc8eff5 100644 --- a/gnu/packages/package-management.scm +++ b/gnu/packages/package-management.scm @@ -1145,7 +1145,6 @@ (define-public python-conda-package-handling (list python-cython python-mock python-pytest - python-pytest-cov python-pytest-mock python-setuptools python-wheel)) diff --git a/gnu/packages/patchutils.scm b/gnu/packages/patchutils.scm index cdefa485836..870d5ae02c3 100644 --- a/gnu/packages/patchutils.scm +++ b/gnu/packages/patchutils.scm @@ -595,7 +595,7 @@ (define-public pwclient "/share/man/man1")) #t))))) (native-inputs - (list python-pbr python-pytest python-pytest-cov python-mock)) + (list python-pbr python-pytest python-mock)) (home-page "https://github.com/getpatchwork/pwclient") (synopsis "Command-line client for the Patchwork patch tracking tool") diff --git a/gnu/packages/protobuf.scm b/gnu/packages/protobuf.scm index 9c4d56bd384..91c8731726b 100644 --- a/gnu/packages/protobuf.scm +++ b/gnu/packages/protobuf.scm @@ -469,7 +469,7 @@ (define-public python-pure-protobuf (base32 "15dp5pvazd0jx4wzzh79080ah7hkpd3axh40al9vhzs2hf3v90hx")))) (build-system python-build-system) (native-inputs - (list python-pytest python-pytest-cov)) + (list python-pytest)) (arguments `(#:phases (modify-phases %standard-phases diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index d2618807bc7..4643ce91e2e 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -243,7 +243,7 @@ (define-public python-testfixtures (arguments `(#:tests? #f)) ; PyTest-Django fails to build in master (native-inputs - (list python-pytest python-pytest-cov + (list python-pytest ;;("python-pytest-django" ,python-pytest-django) python-wheel)) (synopsis "Tests components for Python") @@ -417,7 +417,6 @@ (define-public python-vcrpy python-ipaddress python-mock python-pytest - python-pytest-cov python-pytest-httpbin python-urllib3)) (home-page "https://github.com/kevin1024/vcrpy") @@ -724,7 +723,6 @@ (define-public python-pytest-filter-subpackage (build-system pyproject-build-system) (native-inputs (list python-pytest - python-pytest-cov python-pytest-doctestplus python-setuptools-scm python-setuptools @@ -1880,7 +1878,7 @@ (define-public python-atpublic (build-system pyproject-build-system) (arguments (list #:build-backend "pdm.backend")) (native-inputs - (list python-pytest python-pdm-backend python-sybil python-pytest-cov)) + (list python-pytest python-pdm-backend python-sybil)) (home-page "https://public.readthedocs.io/") (synopsis "@code{@@public} decorator for populating @code{__all__}") (description @@ -2703,7 +2701,7 @@ (define-public python-sybil (lambda* (#:key tests? #:allow-other-keys) (when tests? (invoke "pytest"))))))) - (native-inputs (list python-pytest python-pytest-cov)) + (native-inputs (list python-pytest)) (home-page "https://github.com/simplistix/sybil") (synopsis "Automated testing for examples in code and documentation") (description @@ -2835,8 +2833,7 @@ (define-public python-vulture ;; skip test that uses python-pint ;; pint has many dependencies "not test_whitelists_with_python"))))))) - (native-inputs (list python-pytest python-pytest-cov - python-setuptools python-wheel)) + (native-inputs (list python-pytest python-setuptools python-wheel)) (propagated-inputs (list python-toml)) (home-page "https://github.com/jendrikseipp/vulture") (synopsis "Find dead Python code") diff --git a/gnu/packages/python-compression.scm b/gnu/packages/python-compression.scm index 5faf7b2a3cb..fd194571633 100644 --- a/gnu/packages/python-compression.scm +++ b/gnu/packages/python-compression.scm @@ -112,7 +112,6 @@ (define-public python-multivolumefile python-hypothesis python-pyannotate python-pytest - python-pytest-cov python-setuptools python-wheel)) (home-page "https://github.com/miurahr/multivolume") @@ -247,7 +246,6 @@ (define-public python-pybcj (native-inputs (list python-hypothesis python-pytest - python-pytest-cov python-setuptools-scm python-setuptools python-wheel)) @@ -278,7 +276,7 @@ (define-public python-bcj-cffi (propagated-inputs (list python-cffi python-toml python-setuptools-scm)) (native-inputs - (list python-setuptools python-pytest python-pytest-cov)) + (list python-setuptools python-pytest)) (home-page "https://github.com/miurahr/bcj-cffi") (synopsis "Branch / Call /Jump CFFI library in Python") (description "This package provides an implementation of the Branch / Call / @@ -406,7 +404,6 @@ (define-public python-pyppmd (list python-hypothesis python-pytest python-pytest-benchmark - python-pytest-cov python-pytest-timeout python-setuptools-scm python-setuptools @@ -436,8 +433,7 @@ (define-public python-ppmd-cffi (native-inputs (list python-hypothesis python-setuptools-scm - python-pytest - python-pytest-cov)) + python-pytest)) (home-page "https://github.com/miurahr/ppmd") (synopsis "Prediction by Partial Matching compression library") (description "PPMd is a compression algorithm library using the Prediction @@ -478,7 +474,6 @@ (define-public python-py7zr python-pyannotate python-pytest python-pytest-benchmark - python-pytest-cov python-pytest-remotedata python-pytest-timeout)) (home-page "https://github.com/miurahr/py7zr") diff --git a/gnu/packages/python-crypto.scm b/gnu/packages/python-crypto.scm index 7aaa37d7965..6965a330624 100644 --- a/gnu/packages/python-crypto.scm +++ b/gnu/packages/python-crypto.scm @@ -457,7 +457,7 @@ (define-public python-certauth (propagated-inputs (list python-pyopenssl python-tldextract)) (native-inputs - (list python-pytest-cov)) + (list python-pytest)) (home-page "https://github.com/ikreymer/certauth") (synopsis "Certificate authority creation tool") (description "This package provides a small library, built on top of @@ -1501,7 +1501,6 @@ (define-public python-trustme (list python-more-itertools python-pyopenssl python-pytest - python-pytest-cov python-service-identity python-setuptools python-wheel diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 567fa5d1559..4511d9bc7c8 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -297,7 +297,6 @@ (define-public python-scipy python-pooch python-pydevtool python-pytest - python-pytest-cov python-pytest-timeout python-pytest-xdist)) (home-page "https://scipy.org/") @@ -652,8 +651,7 @@ (define-public python-trimesh "'$MESH_PRE'"))))))) (native-inputs (list python-pyinstrument - python-pytest - python-pytest-cov)) + python-pytest)) (propagated-inputs (list python-chardet python-colorlog @@ -1122,7 +1120,6 @@ (define-public python-pandarallel (list python-mkdocs-material python-numpy python-pytest - python-pytest-cov python-pytest-xdist python-setuptools python-wheel)) @@ -1357,8 +1354,7 @@ (define-public python-pyts python-scikit-learn python-scipy)) (native-inputs - (list python-pytest python-pytest-cov python-setuptools - python-wheel)) + (list python-pytest python-setuptools python-wheel)) (home-page "https://github.com/johannfaouzi/pyts") (synopsis "Python package for time series classification") (description @@ -1899,7 +1895,7 @@ (define-public python-upsetplot (propagated-inputs (list python-matplotlib python-pandas)) (native-inputs - (list python-pytest-runner python-pytest-cov)) + (list python-pytest-runner)) (home-page "https://upsetplot.readthedocs.io") (synopsis "Draw UpSet plots with Pandas and Matplotlib") (description @@ -2048,7 +2044,7 @@ (define-public python-pingouin (("kwargs\\[\"penalty\"\\] = \"none\"") "kwargs[\"penalty\"] = None"))))))) (native-inputs - (list python-pytest python-pytest-cov)) + (list python-pytest)) (propagated-inputs (list python-matplotlib python-mpmath @@ -3090,7 +3086,7 @@ (define-public python-opt-einsum (when tests? (invoke "pytest" "-vv"))))))) (propagated-inputs (list python-numpy)) - (native-inputs (list python-pytest python-pytest-cov python-pytest-pep8)) + (native-inputs (list python-pytest python-pytest-pep8)) (home-page "https://github.com/dgasmith/opt_einsum") (synopsis "Optimizing numpys einsum function") (description @@ -3179,7 +3175,7 @@ (define-public python-salib python-numpy python-pandas python-scipy)) - (native-inputs (list python-hatchling python-pytest python-pytest-cov)) + (native-inputs (list python-hatchling python-pytest)) (home-page "https://salib.readthedocs.io/en/latest/") (synopsis "Tools for global sensitivity analysis") (description "SALib provides tools for global sensitivity analysis. It diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 08be81ad1c5..c1f803cb131 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -201,7 +201,6 @@ (define-public python-huggingface-hub python-pydantic python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-env python-pytest-rerunfailures python-pytest-vcr @@ -314,7 +313,6 @@ (define-public python-portend (native-inputs (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-mypy python-setuptools @@ -432,7 +430,7 @@ (define-public python-aiosignal (build-system pyproject-build-system) (arguments (list #:test-flags #~(list "tests"))) (propagated-inputs (list python-frozenlist)) - (native-inputs (list python-pytest python-pytest-asyncio python-pytest-cov + (native-inputs (list python-pytest python-pytest-asyncio python-setuptools python-wheel)) (home-page "https://github.com/aio-libs/aiosignal") (synopsis "Callback manager for Python @code{asyncio} projects") @@ -681,12 +679,11 @@ (define-public python-aiostream (sha256 (base32 "0l2ijb7yk0820wiyf6zrzx8fhzf8925an7r06mcaw3in1mr6rssq")))) - (build-system python-build-system) + (build-system pyproject-build-system) (native-inputs (list python-setuptools python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-runner python-wheel)) (home-page "https://github.com/vxgmichel/aiostream") @@ -977,7 +974,6 @@ (define-public python-ovh (arguments (list #:tests? #f)) ; XXX: tests require networking (propagated-inputs (list python-requests)) (native-inputs (list python-pytest - python-pytest-cov python-setuptools python-sphinx python-wheel)) @@ -1000,7 +996,6 @@ (define-public python-cbor2 (build-system pyproject-build-system) (native-inputs (list python-pytest - python-pytest-cov python-setuptools python-setuptools-scm python-wheel)) @@ -1271,7 +1266,6 @@ (define-public python-httplib2 python-future python-mock python-pytest - python-pytest-cov python-pytest-forked python-pytest-randomly python-pytest-timeout @@ -1301,8 +1295,7 @@ (define-public python-cheroot (arguments (list #:test-flags - #~(list "--cov=cheroot" - ;; Tests are flaky in parallel invocation. + #~(list ;; Tests are flaky in parallel invocation. ;; "--numprocesses=auto" "--doctest-modules" "--showlocals" @@ -1327,7 +1320,6 @@ (define-public python-cheroot python-pyopenssl python-pypytools python-pytest - python-pytest-cov python-pytest-mock python-pytest-xdist python-requests @@ -1403,7 +1395,6 @@ (define-public parfive python-tqdm)) (native-inputs (list python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-localserver python-pytest-socket python-setuptools @@ -1472,8 +1463,7 @@ (define-public python-jose #t))))) (native-inputs (list ;; All native inputs are for tests. - python-pyasn1 python-pytest python-pytest-cov - python-pytest-runner)) + python-pyasn1 python-pytest python-pytest-runner)) (propagated-inputs (list python-cryptography python-ecdsa python-rsa python-six)) (synopsis "JOSE implementation in Python") @@ -1519,7 +1509,7 @@ (define-public python-pyscss (base32 "1vinddg8sbh3v9n1r1wmvjx6ydk8xp7scbvhb3csl4y9xz7vhk6g")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest python-pytest-cov python-setuptools python-wheel)) + (list python-pytest python-setuptools python-wheel)) (inputs (list pcre)) (home-page "https://github.com/Kronuz/pyScss") @@ -1586,12 +1576,11 @@ (define-public python-mechanicalsoup (uri (pypi-uri "MechanicalSoup" version)) (sha256 (base32 "01sddjxy3rznh63hnl5lbv1hhk6xyiviwmkiw4x7v4ap35fb3lrp")))) - (build-system python-build-system) + (build-system pyproject-build-system) (propagated-inputs (list python-beautifulsoup4 python-lxml python-requests python-six)) (native-inputs - (list python-pytest-cov - python-pytest-flake8 + (list python-pytest-flake8 python-pytest-httpbin python-pytest-mock python-pytest-runner @@ -2534,8 +2523,7 @@ (define-public python-priority ;; This test exceeded the Hypothesis deadline. "not test_period_of_repetition")))))) (native-inputs - (list python-hypothesis python-pytest python-pytest-cov - python-pytest-xdist)) + (list python-hypothesis python-pytest python-pytest-xdist)) (home-page "https://python-hyper.org/projects/priority/en/latest/") (synopsis "Pure-Python implementation of the HTTP/2 priority tree") (description @@ -2592,7 +2580,6 @@ (define-public hypercorn python-poetry-core python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-trio python-trio)) (home-page "https://gitlab.com/pgjones/hypercorn/") @@ -3551,7 +3538,7 @@ (define-public python-apiron (propagated-inputs (list python-requests)) (native-inputs - (list python-pytest python-pytest-cov)) + (list python-pytest)) (home-page "https://github.com/ithaka/apiron") (synopsis "Python wrapper for interacting with RESTful APIs") (description @@ -3815,7 +3802,6 @@ (define-public python-aioftp (list python-async-timeout python-pytest python-pytest-asyncio - python-pytest-cov python-setuptools python-trustme python-wheel)) @@ -3922,7 +3908,7 @@ (define-public python-oauthlib (lambda _ (invoke "pytest" "-vv")))))) (native-inputs - (list python-pytest python-pytest-cov python-mock)) + (list python-pytest python-mock)) (propagated-inputs (list python-cryptography python-pyjwt python-blinker)) (home-page "https://github.com/oauthlib/oauthlib") @@ -5877,8 +5863,7 @@ (define-public python-tinycss (list #:test-flags '(list "-k" "not test_speedups"))) (native-inputs - (list python-pytest-cov - python-pytest-flake8 + (list python-pytest-flake8 python-pytest-isort python-pytest-runner python-setuptools @@ -5953,7 +5938,7 @@ (define-public python-cssselect2 (propagated-inputs (list python-tinycss2)) (native-inputs - (list python-pytest-cov python-pytest-runner)) + (list python-pytest-runner)) (home-page "https://cssselect2.readthedocs.io/") (synopsis "CSS selectors for Python ElementTree") (description "@code{cssselect2} is a straightforward implementation of @@ -6079,7 +6064,6 @@ (define-public gunicorn python-aiohttp python-gevent python-pytest - python-pytest-cov python-sphinx texinfo)) (propagated-inputs (list python-packaging python-setuptools python-wheel)) @@ -6434,7 +6418,6 @@ (define-public python-httpcore (native-inputs (list python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-httpbin python-pytest-trio python-uvicorn @@ -6609,7 +6592,7 @@ (define-public python-wsgiprox (propagated-inputs (list python-certauth python-gevent python-websocket-client)) (native-inputs - (list python-mock python-pytest-cov python-waitress)) + (list python-mock python-waitress)) (home-page "https://github.com/webrecorder/wsgiprox") (synopsis "HTTP/S proxy with WebSockets over WSGI") (description "@code{wsgiprox} is a Python WSGI (Web Server Gateway @@ -6649,9 +6632,7 @@ (define-public python-warcio "test_capture_https_proxy_same_session") " and not "))))) (native-inputs - ;; These inputs are required for the test suite. - (list python-httpbin python-pytest-cov python-requests - python-wsgiprox)) + (list python-httpbin python-pytest python-requests python-wsgiprox)) (home-page "https://github.com/webrecorder/warcio") (synopsis "Streaming web archival archive (WARC) library") (description "warcio is a Python library to read and write the WARC format @@ -6765,12 +6746,9 @@ (define-public python-venusian (uri (pypi-uri "venusian" version)) (sha256 (base32 "0f7f67dkgxxcjfhpdd5frb9pszkf04lyzzpn5069q0xi89r2p17n")))) - (build-system python-build-system) + (build-system pyproject-build-system) (native-inputs - `(("python-pytest" ,python-pytest) - ("python-runner" ,python-pytest-runner) - ("python-pytest-cov" ,python-pytest-cov))) - (arguments '(#:test-target "pytest")) + (list python-pytest python-pytest-runner)) (home-page "https://docs.pylonsproject.org/projects/venusian") (synopsis "Library for deferring decorator actions") (description @@ -7365,7 +7343,6 @@ (define-public python-cloud-init (native-inputs (list procps ;for ps when running tests python-pytest - python-pytest-cov python-pytest-mock python-passlib)) (home-page "https://github.com/canonical/cloud-init") @@ -7751,8 +7728,7 @@ (define-public python-siosocks (lambda* (#:key tests? #:allow-other-keys) (when tests? (invoke "pytest" "-vvv"))))))) - (native-inputs (list python-pytest python-pytest-asyncio python-pytest-cov - python-pytest-trio)) + (native-inputs (list python-pytest python-pytest-asyncio python-pytest-trio)) (propagated-inputs (list python-trio)) (home-page "https://github.com/pohmelie/siosocks") (synopsis "SOCKSv4 & SOCKSv5 TCP proxy protocol implementation in Python") @@ -8784,7 +8760,6 @@ (define-public python-zeep python-pretend python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-httpx python-requests-mock)) (home-page "https://docs.python-zeep.org/en/stable/") diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 9396290401d..c8766db819b 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -321,7 +321,6 @@ (define-public python-apprise python-cryptography python-paho-mqtt python-pytest - python-pytest-cov python-pytest-mock python-pytest-xdist python-setuptools @@ -421,7 +420,7 @@ (define-public python-janus (base32 "04hnrdcf03g1s0x3sr72sh9gnszz6kyfsl9dg8a4n0zvvhn6z5yz")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest python-pytest-cov python-pytest-asyncio + (list python-pytest python-pytest-asyncio python-setuptools python-wheel)) (propagated-inputs (list python-typing-extensions)) (home-page "https://github.com/aio-libs/janus/") @@ -586,8 +585,7 @@ (define-public python-logbook (setenv "CYBUILD" "True") (invoke "pytest" "--cov=logbook" "-r" "s" "tests"))))))) (native-inputs - (list python-cython python-mock python-pytest python-pytest-cov - python-brotli)) + (list python-cython python-mock python-pytest python-brotli)) (home-page "https://github.com/getlogbook/logbook") (synopsis "Logbook is a logging replacement for Python") (description @@ -1018,8 +1016,7 @@ (define-public python-affine (base32 "1shyvajayyzbkp9dihb4mz835jnkp0kqqbyjfqci6v43da6q2kd2")))) (build-system pyproject-build-system) - (propagated-inputs (list python-pydocstyle - python-pytest python-pytest-cov)) + (propagated-inputs (list python-pydocstyle python-pytest )) (native-inputs (list python-flit-core)) (home-page "https://github.com/rasterio/affine") (synopsis "Matrices describing affine transformation of the plane") @@ -1256,7 +1253,6 @@ (define-public python-contourpy pkg-config pybind11 python-pytest - python-pytest-cov python-wurlitzer)) (home-page "https://contourpy.readthedocs.io/") (synopsis @@ -1338,7 +1334,6 @@ (define-public python-mdit-py-plugins (native-inputs (list python-flit-core python-pytest - python-pytest-cov python-pytest-regressions)) (home-page "https://github.com/executablebooks/mdit-py-plugins") (synopsis "Collection of plugins for markdown-it-py") @@ -1669,7 +1664,7 @@ (define-public python-pint ;; present in registry" " and not test_load_definitions_stage_2")))) (native-inputs - (list python-pytest python-pytest-benchmark python-pytest-cov + (list python-pytest python-pytest-benchmark python-pytest-mpl python-pytest-subtests python-setuptools python-setuptools-scm python-wheel)) (propagated-inputs @@ -2527,7 +2522,6 @@ (define-public python-rasterio python-hypothesis python-packaging python-pytest - python-pytest-cov python-shapely python-wheel)) (home-page "https://github.com/rasterio/rasterio") @@ -2688,7 +2682,6 @@ (define-public python-bidict python-py python-pytest python-pytest-benchmark - python-pytest-cov python-setuptools-scm python-sortedcollections python-sortedcontainers @@ -3574,7 +3567,6 @@ (define-public python-can python-parameterized python-pyserial python-pytest - python-pytest-cov python-pytest-runner python-pytest-timeout python-wheel)) @@ -4070,8 +4062,7 @@ (define-public dosage python-requests python-six)) (native-inputs - (list python-pytest-cov python-pytest-xdist python-responses - python-setuptools-scm)) + (list python-pytest-xdist python-responses python-setuptools-scm)) (home-page "https://github.com/webcomics/dosage") (synopsis "Comic strip downloader and archiver") (description "Dosage is designed to keep a local copy of specific webcomics and other @@ -4937,7 +4928,6 @@ (define-public python-portalocker "0lawjm736vs86wlnxc3qqh37l11z0yx81xq3dmrw33m86kaq2bh3")))) (build-system pyproject-build-system) (native-inputs (list python-pytest - python-pytest-cov python-pytest-mypy python-pytest-timeout python-redis @@ -5030,7 +5020,6 @@ (define-public python-extension-helpers (native-inputs (list python-pytest python-pytest-astropy - python-pytest-cov python-setuptools-scm python-setuptools python-wheel)) @@ -5168,7 +5157,7 @@ (define-public python-mizani (list python-matplotlib python-numpy python-pandas python-scipy)) (native-inputs (list python-setuptools python-setuptools-scm - python-pytest python-pytest-cov tzdata)) + python-pytest tzdata)) (home-page "https://github.com/has2k1/mizani") (synopsis "Create data visualizations in Python") (description @@ -5557,8 +5546,6 @@ (define-public python-cligj (build-system python-build-system) (propagated-inputs (list python-click)) - (native-inputs - (list python-pytest-cov)) (home-page "https://github.com/mapbox/cligj") (synopsis "Click params for command line interfaces to GeoJSON") (description @@ -5667,10 +5654,7 @@ (define-public python-ddlparse (base32 "1nh8m6rxslwk05daxshxmgk41qfp18yynydba49b13l4m8dnh634")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest - python-pytest-cov - python-setuptools - python-wheel)) + (list python-pytest python-setuptools python-wheel)) (propagated-inputs (list python-pyparsing)) (home-page "https://github.com/shinichi-takii/ddlparse") (synopsis "Parses and converts DDL to BigQuery JSON schema") @@ -7639,8 +7623,7 @@ (define-public python-robotframework-pythonlibcore (when tests? (invoke "utest/run.py"))))))) (native-inputs - (list python-pytest python-pytest-cov python-pytest-mockito - python-robotframework)) + (list python-pytest python-pytest-mockito python-robotframework)) (home-page "https://github.com/robotframework/PythonLibCore") (synopsis "Robot Framework Python library tools") (description "PythonLibCore provides tools for creating larger test @@ -8180,7 +8163,6 @@ (define-public python-lsp-server python-pandas python-pylint python-pytest - python-pytest-cov python-rope python-setuptools python-wheel)) @@ -8710,7 +8692,6 @@ (define-public python-sparse python-importlib-metadata python-pytest python-pytest-black - python-pytest-cov python-setuptools)) (home-page "https://github.com/pydata/sparse/") (synopsis "Library for multi-dimensional sparse arrays") @@ -9169,7 +9150,6 @@ (define-public python-numpydoc (native-inputs (list python-matplotlib python-pytest - python-pytest-cov python-setuptools python-wheel)) (home-page "https://pypi.org/project/numpydoc/") @@ -9890,7 +9870,7 @@ (define-public python-multidict "1kjrxav572j45xvr1iy60zb2g8zqvrinzdkl4ax36js4vczckl8d")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest python-pytest-cov python-setuptools python-wheel)) + (list python-pytest python-setuptools python-wheel)) (home-page "https://github.com/aio-libs/multidict/") (synopsis "Multidict implementation") (description "Multidict is dict-like collection of key-value pairs @@ -10197,7 +10177,6 @@ (define-public python-pikepdf python-setuptools-scm python-psutil python-pytest - python-pytest-cov python-pytest-timeout python-pytest-xdist python-dateutil @@ -10776,8 +10755,7 @@ (define-public python-imageio (propagated-inputs (list python-imageio-ffmpeg python-numpy python-pillow python-tifffile python-setuptools)) (native-inputs - (list python-fsspec python-pytest - python-pytest-cov python-wheel)) + (list python-fsspec python-pytest python-wheel)) (home-page "https://imageio.github.io/") (synopsis "Library for reading and writing a wide range of image data") (description @@ -11064,7 +11042,6 @@ (define-public python-manimpango (list pkg-config python-cython python-pytest - python-pytest-cov python-setuptools python-wheel)) (inputs @@ -11557,7 +11534,6 @@ (define-public python-importlib-resources (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-flake8 python-pytest-mypy @@ -11688,7 +11664,6 @@ (define-public python-jaraco-classes (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-flake8 python-pytest-mypy python-setuptools @@ -11722,7 +11697,6 @@ (define-public python-jaraco-collections (native-inputs (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-mypy python-setuptools @@ -11783,7 +11757,6 @@ (define-public python-jaraco-context (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-flake8 python-pytest-mypy python-setuptools @@ -11818,7 +11791,6 @@ (define-public python-jaraco-functools python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-flake8 python-pytest-mypy python-setuptools @@ -11879,7 +11851,6 @@ (define-public python-jaraco-test (native-inputs (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-flake8 python-pytest-mypy @@ -11913,7 +11884,6 @@ (define-public python-jaraco-text (native-inputs (list python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-mypy python-setuptools @@ -12058,7 +12028,6 @@ (define-public python-ipyparallel (list python-ipython python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-tornado python-testpath)) (propagated-inputs @@ -13356,7 +13325,7 @@ (define-public python-three-merge (propagated-inputs (list python-diff-match-patch)) (native-inputs - (list python-flaky python-pytest python-pytest-cov + (list python-flaky python-pytest python-pytest-runner python-pytest-timeout)) (home-page "https://github.com/spyder-ide/three-merge") (synopsis "Library for merging two strings with respect to a base one") @@ -13680,7 +13649,6 @@ (define-public python-seaborn python-numpydoc python-mypy python-pytest - python-pytest-cov python-pytest-xdist python-pyyaml)) (home-page "https://seaborn.pydata.org/") @@ -14319,7 +14287,6 @@ (define-public python-sentry-sdk python-mock python-pyrsistent python-pytest - python-pytest-cov python-pytest-django python-pytest-forked python-pytest-localserver @@ -16046,7 +16013,7 @@ (define-public python-sniffio (lambda _ (invoke "pytest" "-vv")))))) (native-inputs - (list python-curio python-pytest python-pytest-cov)) + (list python-curio python-pytest)) (home-page "https://github.com/python-trio/sniffio") (synopsis "Detect which async library a program is running under") (description "This package detects which async library a program is @@ -16180,7 +16147,6 @@ (define-public python-get-version (list python-pygments python-pytest python-pytest-black - python-pytest-cov python-setuptools python-testpath)) (home-page "https://github.com/flying-sheep/get_version") @@ -16295,7 +16261,7 @@ (define-public python-legacy-api-wrap (build-system python-build-system) (propagated-inputs (list python-get-version python-pytest python-pytest-black - python-pytest-cov python-setuptools)) + python-setuptools)) (home-page "https://github.com/flying-sheep/legacy-api-wrap") (synopsis "Legacy API wrapper") (description "This module defines a decorator to wrap legacy APIs. The @@ -16557,7 +16523,6 @@ (define-public python-path python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-flake8 python-pytest-mypy))) @@ -16663,7 +16628,6 @@ (define-public python-pip-run python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-flake8 python-pytest-mypy))) @@ -17017,7 +16981,6 @@ (define-public python-debugpy python-flask python-psutil python-pytest - python-pytest-cov python-pytest-timeout python-pytest-xdist python-requests)) @@ -17578,7 +17541,6 @@ (define-public python-notebook (list python-jupyter-server python-nbval python-pytest - python-pytest-cov python-requests python-requests-unixsocket python-setuptools @@ -17628,8 +17590,7 @@ (define-public python-ipywidgets (list python-comm python-ipython python-jupyterlab-widgets python-traitlets python-widgetsnbextension)) (native-inputs - (list python-ipykernel python-jsonschema python-pytest python-pytest-cov - python-pytz)) + (list python-ipykernel python-jsonschema python-pytest python-pytz)) (home-page "https://ipython.org") (synopsis "IPython HTML widgets for Jupyter") (description "Ipywidgets are interactive HTML widgets for Jupyter @@ -18246,7 +18207,6 @@ (define-public python-qstylizer (list python-pbr python-pytest python-pytest-catchlog - python-pytest-cov python-pytest-mock python-pytest-runner python-pytest-xdist)) @@ -19434,7 +19394,6 @@ (define-public python-cookiecutter git python-freezegun python-pytest - python-pytest-cov python-pytest-mock)) (propagated-inputs (list python-arrow python-binaryornot @@ -19828,8 +19787,7 @@ (define-public python-pyqtgraph (lambda _ (setenv "QT_QPA_PLATFORM" "offscreen")))))) (native-inputs - (list python-pytest python-pytest-cov python-pytest-xdist - python-setuptools python-wheel)) + (list python-pytest python-pytest-xdist python-setuptools python-wheel)) (inputs (list qtbase-5)) (propagated-inputs @@ -20014,7 +19972,6 @@ (define-public python-codespell (native-inputs (list python-pygments python-pytest - python-pytest-cov python-pytest-dependency python-tomli python-setuptools @@ -21107,7 +21064,6 @@ (define-public python-inflect python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-flake8 python-pytest-mypy @@ -21673,8 +21629,7 @@ (define-public python-lazy-loader "0dwghffnsjjf4pi4gwbl43rx04jmap375hdamafs5cpm6j78js1v")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest - python-pytest-cov)) + (list python-pytest)) (propagated-inputs (list python-flit-core)) (home-page "https://scientific-python.org/specs/spec-0001/") @@ -22241,8 +22196,7 @@ (define-public python-pymemcache #:test-flags '(list "--ignore=pymemcache/test/test_compression.py"))) (native-inputs - (list python-faker python-pytest python-pytest-cov python-setuptools - python-wheel)) + (list python-faker python-pytest python-setuptools python-wheel)) (home-page "https://github.com/pinterest/pymemcache") (synopsis "Comprehensive, fast, pure Python memcached client") (description @@ -22863,8 +22817,7 @@ (define-public python-natsort (when tests? (invoke "pytest" "-v"))))))) (native-inputs - (list python-hypothesis python-pytest-cov python-pytest-mock - python-pytest)) + (list python-hypothesis python-pytest-mock python-pytest)) (propagated-inputs ; TODO: Add python-fastnumbers. (list python-pyicu)) (home-page "https://github.com/SethMMorton/natsort") @@ -24291,7 +24244,7 @@ (define-public python-mwclient (propagated-inputs (list python-requests-oauthlib python-six)) (native-inputs - (list python-mock python-pytest python-pytest-cov + (list python-mock python-pytest python-pytest-runner python-responses)) (home-page "https://github.com/btongminh/mwclient") (synopsis "MediaWiki API client") @@ -25249,7 +25202,6 @@ (define-public python-flasgger python-flex python-marshmallow python-pytest - python-pytest-cov python-setuptools python-wheel)) (home-page "https://github.com/rochacbruno/flasgger/") @@ -25961,7 +25913,6 @@ (define-public python-tempora python-pytest python-pytest-black python-pytest-checkdocs - python-pytest-cov python-pytest-enabler python-pytest-flake8 python-pytest-freezegun @@ -28949,7 +28900,7 @@ (define-public python-outcome (add-installed-pythonpath inputs outputs) (invoke "pytest" "-vv")))))) (native-inputs - (list python-pytest python-pytest-cov python-pytest-asyncio)) + (list python-pytest python-pytest-asyncio)) (propagated-inputs (list python-attrs)) (home-page "https://github.com/python-trio/outcome") @@ -29022,7 +28973,6 @@ (define-public python-trio python-pyopenssl python-pytest python-pytest-xdist - python-pytest-cov python-trustme python-setuptools python-wheel)) @@ -29265,7 +29215,6 @@ (define-public python-apscheduler python-pyside-6 python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-tornado5)) (home-page "https://github.com/agronholm/apscheduler") (synopsis "Task scheduling library for Python") @@ -29936,7 +29885,7 @@ (define-public python-iocapture (invoke "py.test" "-v" "tests") #t))))) (propagated-inputs - (list python-flexmock python-pytest python-pytest-cov python-six)) + (list python-flexmock python-pytest python-six)) (home-page "https://github.com/oinume/iocapture") (synopsis "Python capturing tool for stdout and stderr") (description @@ -30059,8 +30008,7 @@ (define-public python-argh (when tests? (invoke "pytest" "-vv"))))))) (propagated-inputs - (list python-iocapture python-mock python-pytest python-pytest-cov - python-pytest-xdist)) + (list python-iocapture python-mock python-pytest python-pytest-xdist)) (home-page "https://github.com/neithere/argh/") (synopsis "Argparse wrapper with natural syntax") (description @@ -30202,7 +30150,6 @@ (define-public python-flit (list python-responses python-pygments-github-lexers python-pytest - python-pytest-cov python-sphinx python-sphinxcontrib-github-alt python-testpath)) @@ -30518,7 +30465,6 @@ (define-public python-watchdog (list python-pathtools python-pyyaml)) (native-inputs (list python-pytest - python-pytest-cov python-pytest-timeout python-setuptools python-wheel)) (home-page "https://github.com/gorakhargosh/watchdog") @@ -30552,7 +30498,6 @@ (define-public python-watchgod python-pygments python-pytest python-pytest-asyncio - python-pytest-cov python-pytest-mock python-pytest-sugar python-pytest-toolbox @@ -31676,7 +31621,6 @@ (define-public python-cmd2 (list python-invoke python-mock python-pytest - python-pytest-cov python-pytest-mock python-setuptools python-setuptools-scm @@ -32372,7 +32316,7 @@ (define-public python-inform (arguments `(#:tests? #f)) ; PyPI tarball lacks tests (native-inputs - (list python-hypothesis python-pytest-cov python-pytest-runner)) + (list python-hypothesis python-pytest-runner)) (propagated-inputs (list python-arrow python-six)) (home-page "https://inform.readthedocs.io") @@ -32918,7 +32862,6 @@ (define-public python-loguru python-mypy python-pre-commit python-pytest - python-pytest-cov python-pytest-mypy-plugins python-sphinx python-sphinx-autobuild @@ -32977,7 +32920,7 @@ (define-public python-qtsass (for-each make-file-writable (find-files ".")) #t))))) (native-inputs - (list python-flaky python-pytest python-pytest-cov python-pytest-runner)) + (list python-flaky python-pytest python-pytest-runner)) (propagated-inputs (list python-libsass)) (home-page "https://github.com/spyder-ide/qtsass") @@ -33367,7 +33310,6 @@ (define-public python-scikit-build python-packaging python-path python-pytest - python-pytest-cov python-pytest-mock python-pytest-virtualenv python-pytest-xdist @@ -33940,7 +33882,7 @@ (define-public python-pyan3 "python-pyan3-fix-absolute-path-bug.patch")))) (build-system pyproject-build-system) (native-inputs - (list python-pytest python-pytest-cov python-setuptools python-wheel)) + (list python-pytest python-setuptools python-wheel)) (propagated-inputs (list python-jinja2)) (home-page "https://github.com/Technologicat/pyan") @@ -34081,7 +34023,6 @@ (define-public python-minikanren (native-inputs (list python-pydocstyle python-pytest - python-pytest-cov python-pylint python-sympy python-versioneer)) @@ -34238,7 +34179,7 @@ (define-public python-tablib (invoke "pytest"))))))) (native-inputs (list python-pandas ;; required for test-suite - python-pytest python-pytest-cov python-setuptools-scm)) + python-pytest python-setuptools-scm)) (propagated-inputs (list python-markuppy python-odfpy @@ -34753,7 +34694,7 @@ (define-public dynaconf (list python-click python-configobj python-dotenv-0.13.0 python-ruamel.yaml-0.16 python-toml python-tomli)) (native-inputs - (list python-django python-flask python-pytest python-pytest-cov + (list python-django python-flask python-pytest python-pytest-mock python-setuptools python-wheel)) (home-page "https://www.dynaconf.com/") (synopsis "The dynamic configurator for your Python project") @@ -35028,8 +34969,7 @@ (define-public nikola python-yapsy)) (native-inputs (list python-freezegun - python-pytest - python-pytest-cov)) + python-pytest)) (arguments (list #:phases @@ -35279,8 +35219,7 @@ (define-public python-ansicolors (base32 "1q3jqglkq4z0f6nkkn8bswcwqg012i2grrc27kabr8286dg4zycr")))) (build-system python-build-system) (native-inputs - (list python-pytest-cov - unzip)) + (list unzip)) (home-page "https://github.com/jonathaneunice/colors/") (synopsis "ANSI colors for Python") (description @@ -35527,7 +35466,6 @@ (define-public python-shtab (native-inputs (list bash python-pytest - python-pytest-cov python-pytest-timeout python-setuptools python-setuptools-scm @@ -36114,7 +36052,6 @@ (define-public python-scooby (list python-beautifulsoup4 python-numpy python-pytest - python-pytest-cov python-pyvips-for-python-scooby python-scipy)) (propagated-inputs diff --git a/gnu/packages/sphinx.scm b/gnu/packages/sphinx.scm index 26ee93b3aaf..b977367ee35 100644 --- a/gnu/packages/sphinx.scm +++ b/gnu/packages/sphinx.scm @@ -721,7 +721,6 @@ (define-public python-sphinx-gallery python-numpy python-pillow python-pytest - python-pytest-cov python-setuptools python-sphinx python-wheel)) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index de4fb6e3aa7..b8b162b0602 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -2268,7 +2268,7 @@ (define-public python-pymc (lambda* (#:key tests? #:allow-other-keys) (when tests? (setenv "HOME" "/tmp"))))))) - (native-inputs (list python-pytest-cov python-versioneer)) + (native-inputs (list python-versioneer)) (propagated-inputs (list python-arviz python-cachetools python-cloudpickle @@ -2397,7 +2397,6 @@ (define-public python-emcee (build-system pyproject-build-system) (propagated-inputs (list python-numpy)) (native-inputs (list python-pytest - python-pytest-cov python-setuptools python-setuptools-scm python-wheel)) @@ -6778,8 +6777,7 @@ (define-public python-rpy2 (list python-ipython python-numpy python-pandas - python-pytest - python-pytest-cov)) + python-pytest)) (home-page "https://rpy2.github.io") (synopsis "Python interface to the R language") (description "rpy2 is a redesign and rewrite of rpy. It is providing a diff --git a/gnu/packages/task-management.scm b/gnu/packages/task-management.scm index 96df50d7470..4b372cb6148 100644 --- a/gnu/packages/task-management.scm +++ b/gnu/packages/task-management.scm @@ -463,7 +463,6 @@ (define-public todoman (native-inputs (list python-setuptools-scm python-pytest - python-pytest-cov python-freezegun)) (propagated-inputs (list python-atomicwrites diff --git a/gnu/packages/textutils.scm b/gnu/packages/textutils.scm index 2c7fd0365ca..f9f0b96f48a 100644 --- a/gnu/packages/textutils.scm +++ b/gnu/packages/textutils.scm @@ -1676,7 +1676,6 @@ (define-public python-panflute (native-inputs (list python-configparser python-pandocfilters python-pytest - python-pytest-cov python-requests)) (home-page "http://scorreia.com/software/panflute/") (synopsis "Pythonic Pandoc filters") diff --git a/gnu/packages/time.scm b/gnu/packages/time.scm index 2b5236279b5..6e34f80a79d 100644 --- a/gnu/packages/time.scm +++ b/gnu/packages/time.scm @@ -394,7 +394,6 @@ (define-public python-tzlocal (native-inputs (list python-check-manifest python-pytest - python-pytest-cov python-pytest-mock)) (home-page "https://github.com/regebro/tzlocal") (synopsis "Local timezone information for Python") @@ -514,7 +513,6 @@ (define-public python-arrow (native-inputs (list python-chai python-pytest - python-pytest-cov python-pytest-mock python-pytz python-setuptools diff --git a/gnu/packages/vpn.scm b/gnu/packages/vpn.scm index d52d872909d..c0a4907b1b6 100644 --- a/gnu/packages/vpn.scm +++ b/gnu/packages/vpn.scm @@ -971,7 +971,6 @@ (define-public sshuttle (list python-setuptools-scm ;; For tests only. python-mock - python-pytest-cov python-pytest-runner)) (home-page "https://github.com/sshuttle/sshuttle") (synopsis "VPN that transparently forwards connections over SSH") diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm index 736be82c90b..2780672b1ce 100644 --- a/gnu/packages/web.scm +++ b/gnu/packages/web.scm @@ -5111,7 +5111,6 @@ (define-public python-tibanna (native-inputs (list python-poetry-core python-pytest - python-pytest-cov python-pytest-mock)) (home-page "https://github.com/4dn-dcic/tibanna") (synopsis "Tibanna runs portable workflows on the AWS Cloud") @@ -8736,7 +8735,7 @@ (define-public anonip (when tests? (invoke "pytest" "-vv" "tests.py" "anonip.py"))))))) (native-inputs - (list python-pytest python-pytest-cov)) + (list python-pytest)) (home-page "https://github.com/DigitaleGesellschaft/Anonip") (synopsis "Anonymize IP addresses in log files") (description diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm index 7da18bc821c..0f0b653ea2e 100644 --- a/gnu/packages/wm.scm +++ b/gnu/packages/wm.scm @@ -656,7 +656,6 @@ (define-public qtile (list pkg-config python-pep8-naming python-pytest - python-pytest-cov python-psutil python-setuptools-scm xorg-server-for-tests)) From patchwork Sat Jun 1 15:36:55 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28133 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id CBB7627BBE9; Sat, 1 Jun 2024 16:40:37 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,TVD_SPACE_RATIO,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 891F027BBED for ; Sat, 1 Jun 2024 16:40:33 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQq0-00014l-ET; Sat, 01 Jun 2024 11:40:09 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpw-00010H-Vh for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:04 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpw-0007k1-O5 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq8-0003iF-EH for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:16 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 23/32] gnu: python-tinycss2: Remove python-pytest-cov native-input. Resent-From: Nicolas Graves Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 01 Jun 2024 15:40:16 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 70858 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 70858@debbugs.gnu.org Cc: ngraves@ngraves.fr Received: via spool by 70858-submit@debbugs.gnu.org id=B70858.171725640914132 (code B ref 70858); Sat, 01 Jun 2024 15:40:16 +0000 Received: (at 70858) by debbugs.gnu.org; 1 Jun 2024 15:40:09 +0000 Received: from localhost ([127.0.0.1]:57197 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQq0-0003fW-5U for submit@debbugs.gnu.org; Sat, 01 Jun 2024 11:40:09 -0400 Received: from 10.mo550.mail-out.ovh.net ([178.32.96.102]:48985) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpv-0003eR-RF for 70858@debbugs.gnu.org; Sat, 01 Jun 2024 11:40:05 -0400 Received: from director8.ghost.mail-out.ovh.net (unknown [10.108.25.166]) by mo550.mail-out.ovh.net (Postfix) with ESMTP id 4Vs41M3gMDz1R3y for <70858@debbugs.gnu.org>; Sat, 1 Jun 2024 15:39:51 +0000 (UTC) Received: from ghost-submission-6684bf9d7b-m56h8 (unknown [10.110.113.182]) by director8.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 418621FE6B; Sat, 1 Jun 2024 15:39:51 +0000 (UTC) Received: from ngraves.fr ([37.59.142.110]) by ghost-submission-6684bf9d7b-m56h8 with ESMTPSA id hzGXDcdAW2YQFRgAzJ6b0w (envelope-from ); Sat, 01 Jun 2024 15:39:51 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-110S004e09c5434-2f92-48c3-8528-ee26d623ec84, 066A105622CFB65C0C1E9735678F98E7108F9FA5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 Date: Sat, 1 Jun 2024 17:36:55 +0200 Message-ID: <20240601153854.30805-24-ngraves@ngraves.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240601153854.30805-1-ngraves@ngraves.fr> References: <20240601153854.30805-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Ovh-Tracer-Id: 4667699541300208354 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgleduucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffojghfggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepleevueeghffgtdeiueegffduvefhleehtedtffehgeetudfhgfdvledvteelkeegnecuffhomhgrihhnpehrvggrughthhgvughotghsrdhiohenucfkphepuddvjedrtddrtddruddpkedurdeijedrudegiedrvddtkedpfeejrdehledrudegvddruddutdenucevlhhushhtvghrufhiiigvpedtnecurfgrrhgrmhepihhnvghtpeduvdejrddtrddtrddupdhmrghilhhfrhhomhepnhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrpdhnsggprhgtphhtthhopedupdhrtghpthhtohepjedtkeehkeesuggvsggsuhhgshdrghhnuhdrohhrghdpoffvtefjohhsthepmhhoheehtddpmhhouggvpehsmhhtphhouhht X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Nicolas Graves X-ACL-Warn: , Nicolas Graves via Guix-patches X-Patchwork-Original-From: Nicolas Graves via Guix-patches via From: Nicolas Graves Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/python-web.scm (python-tinycss2): [arguments]<#:phases>: Add phase remove-unwanted-dependency to ignore coverage options. [native-inputs]: Remove python-pytest-cov. Change-Id: I853fe3371be84be1655db0ee8d1dca8d23c50ef9 --- gnu/packages/python-web.scm | 11 +++++++++-- 1 file changed, 9 insertions(+), 2 deletions(-) diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index c1f803cb131..707bf903bd1 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -5897,11 +5897,18 @@ (define-public python-tinycss2 (sha256 (base32 "0zyc48vbmczpqj7f3f0d7zb3bz29fyj50dg0m6bbwbr5i88kq3sq")))) (build-system pyproject-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (add-before 'check 'remove-unwanted-dependencies + (lambda _ + (substitute* "pyproject.toml" + (("^addopts.*") ""))))))) (propagated-inputs (list python-webencodings)) (native-inputs - (list python-flit python-pytest python-pytest-cov - python-pytest-flake8 python-pytest-isort)) + (list python-flit python-pytest python-pytest-flake8 python-pytest-isort)) (home-page "https://tinycss2.readthedocs.io/") (synopsis "Low-level CSS parser for Python") (description "@code{tinycss2} can parse strings, return Python objects From patchwork Sat Jun 1 15:36:56 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28156 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 46F6627BBEA; Sat, 1 Jun 2024 16:41:27 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id AAB1927BBE2 for ; Sat, 1 Jun 2024 16:41:26 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQq2-00016G-Ac; Sat, 01 Jun 2024 11:40:10 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpx-00010u-HJ for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:05 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpx-0007k7-6i for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:05 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq8-0003iM-Rd for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:16 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 24/32] gnu: python-django-contact-form: Remove python-pytest-cov native-input. Resent-From: Nicolas Graves Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Sat, 01 Jun 2024 15:40:16 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 70858 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 70858@debbugs.gnu.org Cc: ngraves@ngraves.fr Received: via spool by 70858-submit@debbugs.gnu.org id=B70858.171725640914146 (code B ref 70858); Sat, 01 Jun 2024 15:40:16 +0000 Received: (at 70858) by debbugs.gnu.org; 1 Jun 2024 15:40:09 +0000 Received: from localhost ([127.0.0.1]:57200 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQq1-0003ft-9B for submit@debbugs.gnu.org; Sat, 01 Jun 2024 11:40:09 -0400 Received: from 10.mo576.mail-out.ovh.net ([46.105.73.241]:59811) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1sDQpx-0003ek-Mk for 70858@debbugs.gnu.org; Sat, 01 Jun 2024 11:40:06 -0400 Received: from director10.ghost.mail-out.ovh.net (unknown [10.109.139.93]) by mo576.mail-out.ovh.net (Postfix) with ESMTP id 4Vs41N5Qwxz1hgQ for <70858@debbugs.gnu.org>; Sat, 1 Jun 2024 15:39:52 +0000 (UTC) Received: from ghost-submission-6684bf9d7b-bmq8z (unknown [10.108.42.39]) by director10.ghost.mail-out.ovh.net (Postfix) with ESMTPS id 694E71FE01; Sat, 1 Jun 2024 15:39:52 +0000 (UTC) Received: from ngraves.fr ([37.59.142.107]) by ghost-submission-6684bf9d7b-bmq8z with ESMTPSA id s9JIFMhAW2ZbOAEAI0TfLA (envelope-from ); Sat, 01 Jun 2024 15:39:52 +0000 Authentication-Results: garm.ovh; auth=pass (GARM-107S0015e9185d4-3dbb-4618-99d2-b38936569456, 066A105622CFB65C0C1E9735678F98E7108F9FA5) smtp.auth=ngraves@ngraves.fr X-OVh-ClientIp: 81.67.146.208 Date: Sat, 1 Jun 2024 17:36:56 +0200 Message-ID: <20240601153854.30805-25-ngraves@ngraves.fr> X-Mailer: git-send-email 2.41.0 In-Reply-To: <20240601153854.30805-1-ngraves@ngraves.fr> References: <20240601153854.30805-1-ngraves@ngraves.fr> MIME-Version: 1.0 X-Ovh-Tracer-Id: 4667981017825731298 X-VR-SPAMSTATE: OK X-VR-SPAMSCORE: 0 X-VR-SPAMCAUSE: gggruggvucftvghtrhhoucdtuddrgedvledrvdekkedgledtucetufdoteggodetrfdotffvucfrrhhofhhilhgvmecuqfggjfdpvefjgfevmfevgfenuceurghilhhouhhtmecuhedttdenucenucfjughrpefhvfevufffkffojghfggfgsedtkeertdertddtnecuhfhrohhmpefpihgtohhlrghsucfirhgrvhgvshcuoehnghhrrghvvghssehnghhrrghvvghsrdhfrheqnecuggftrfgrthhtvghrnhepvdehleeiffehtedvlefhffffjeefgfduhfetkeevheeiteduiedugfekuedtheejnecuffhomhgrihhnpehgihhthhhusgdrtghomhenucfkphepuddvjedrtddrtddruddpkedurdeijedrudegiedrvddtkedpfeejrdehledrudegvddruddtjeenucevlhhushhtvghrufhiiigvpedvnecurfgrrhgrmhepihhnvghtpeduvdejrddtrddtrddupdhmrghilhhfrhhomhepnhhgrhgrvhgvshesnhhgrhgrvhgvshdrfhhrpdhnsggprhgtphhtthhopedupdhrtghpthhtohepjedtkeehkeesuggvsggsuhhgshdrghhnuhdrohhrghdpoffvtefjohhsthepmhhoheejiedpmhhouggvpehsmhhtphhouhht X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Nicolas Graves X-ACL-Warn: , Nicolas Graves via Guix-patches X-Patchwork-Original-From: Nicolas Graves via Guix-patches via From: Nicolas Graves Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/django.scm (python-django-contact-form): [native-inputs]: Remove python-pytest-cov. [build-system]: Upgrade to pyproject-build-system. [arguments]<#:phases>: Remove coverage tests for check phase. Change-Id: I4d0fc406401b7e923f7efa084dbe8ea3753e50fc --- gnu/packages/django.scm | 7 ++----- 1 file changed, 2 insertions(+), 5 deletions(-) diff --git a/gnu/packages/django.scm b/gnu/packages/django.scm index 3ab2bc139d1..726dd77639e 100644 --- a/gnu/packages/django.scm +++ b/gnu/packages/django.scm @@ -838,16 +838,13 @@ (define-public python-django-contact-form (sha256 (base32 "1my9hkrylckp5vfqg9b0kncrdlxjnwxll56sdciqn4v19i4wbq1y")))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments `(#:phases (modify-phases %standard-phases (replace 'check (lambda _ - (invoke "coverage" "run" "--source" "contact_form" - "runtests.py")))))) - (native-inputs - (list python-coverage)) + (invoke "python" "runtests.py")))))) (propagated-inputs (list python-django)) (home-page "https://github.com/ubernostrum/django-contact-form") From patchwork Sat Jun 1 15:36:57 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28138 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 926CA27BBF3; Sat, 1 Jun 2024 16:40:55 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,TVD_SPACE_RATIO,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5C16D27BBE2 for ; Sat, 1 Jun 2024 16:40:48 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQq0-00014G-21; Sat, 01 Jun 2024 11:40:08 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpy-00011r-0j for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:06 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpx-0007kI-No for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:05 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq9-0003iW-Dc for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:17 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 25/32] gnu: python-dateutil: Remove python-pytest-cov native-input. 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[arguments]<#:phases>: Add remove-pytest-cov-dep phase. Change-Id: Id82a147d6e40383ecc2661ac896b65b858c181e0 --- gnu/packages/time.scm | 18 ++++++++++++------ 1 file changed, 12 insertions(+), 6 deletions(-) diff --git a/gnu/packages/time.scm b/gnu/packages/time.scm index 6e34f80a79d..99cf7ceb6a6 100644 --- a/gnu/packages/time.scm +++ b/gnu/packages/time.scm @@ -246,14 +246,20 @@ (define-public python-dateutil (build-system pyproject-build-system) (arguments (list - #:test-flags '(list ; avoid freezegun dependency - "--ignore=dateutil/test/test_utils.py" - "--ignore=dateutil/test/test_rrule.py" - ;; XXX: Fails to get timezone from /etc/localtime. - "--ignore=dateutil/test/test_tz.py"))) + #:test-flags '(list "dateutil/test" "docs" + ;; avoid freezegun dependency + "--ignore=dateutil/test/test_utils.py" + "--ignore=dateutil/test/test_rrule.py" + ;; XXX: Fails to get timezone from /etc/localtime. + "--ignore=dateutil/test/test_tz.py") + #:phases #~(modify-phases %standard-phases + (add-after 'unpack 'remove-pytest-cov-dep + (lambda _ + (substitute* "dateutil/test/conftest.py" + (("item\\.add_marker\\(pytest\\.mark\\.no_cover\\)") + "pass"))))))) (native-inputs (list python-pytest - python-pytest-cov python-setuptools python-setuptools-scm python-wheel)) From patchwork Sat Jun 1 15:36:58 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28135 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 24A9D27BBE2; Sat, 1 Jun 2024 16:40:39 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3A43A27BBEA for ; Sat, 1 Jun 2024 16:40:30 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQq1-00015s-Nv; Sat, 01 Jun 2024 11:40:09 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQpy-00012Y-CF for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:06 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQpy-0007kS-4E for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:06 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQq9-0003id-QV for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:17 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 26/32] build-system/pyproject: Remove python-pytest-isort native-input. 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[native-inputs]: Remove python-pytest-isort. Change-Id: I706e8c310adbeda49b91c6815d299172ce05df22 --- gnu/packages/dav.scm | 1 - gnu/packages/python-web.scm | 3 +-- 2 files changed, 1 insertion(+), 3 deletions(-) diff --git a/gnu/packages/dav.scm b/gnu/packages/dav.scm index 0612a72c831..99284220846 100644 --- a/gnu/packages/dav.scm +++ b/gnu/packages/dav.scm @@ -59,7 +59,6 @@ (define-public radicale (native-inputs (list python-pytest python-pytest-flake8 - python-pytest-isort python-pytest-runner python-waitress)) (propagated-inputs diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 707bf903bd1..0b794590620 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -5861,10 +5861,9 @@ (define-public python-tinycss (build-system pyproject-build-system) (arguments (list #:test-flags - '(list "-k" "not test_speedups"))) + '(list "-k" "not ISORT and not test_speedups"))) (native-inputs (list python-pytest-flake8 - python-pytest-isort python-pytest-runner python-setuptools python-wheel)) From patchwork Sat Jun 1 15:36:59 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28146 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id A119F27BBE2; Sat, 1 Jun 2024 16:41:09 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id C58E227BBE9 for ; Sat, 1 Jun 2024 16:41:07 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQqi-0001w4-Fo; Sat, 01 Jun 2024 11:40:52 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQqh-0001uO-6D for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:51 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQqg-0008BZ-U5 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:50 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQqs-0003lO-KT for guix-patches@gnu.org; Sat, 01 Jun 2024 11:41:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 27/32] build-system/pyproject: Remove python-pytest-black native-input. 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Change-Id: Ib46f1c4a3cc33821cda3d7b2172d36158aa812c9 --- gnu/packages/check.scm | 2 -- gnu/packages/python-web.scm | 1 - gnu/packages/python-xyz.scm | 21 ++++----------------- 3 files changed, 4 insertions(+), 20 deletions(-) diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index 6b16ec7711b..f8ead8df4e4 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -2491,7 +2491,6 @@ (define-public python-pytest-enabler python-jaraco-functools python-toml)) (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-flake8 python-pytest-mypy @@ -2664,7 +2663,6 @@ (define-public python-pytest-perf "and not upstream_url")))) (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-flake8 diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 0b794590620..98dc11a9e48 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -311,7 +311,6 @@ (define-public python-portend (propagated-inputs (list python-tempora)) ;; TODO: Add python-pytest-ruff to native-inputs once it has been packaged. (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-mypy diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index c8766db819b..8dd5bf2e9e3 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -8691,7 +8691,6 @@ (define-public python-sparse (list python-dask python-importlib-metadata python-pytest - python-pytest-black python-setuptools)) (home-page "https://github.com/pydata/sparse/") (synopsis "Library for multi-dimensional sparse arrays") @@ -11532,7 +11531,6 @@ (define-public python-importlib-resources (string-append (getcwd) "/_custom_build"))))))) (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-flake8 @@ -11662,7 +11660,6 @@ (define-public python-jaraco-classes #:test-flags '(list "-k" "not project"))) (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-flake8 python-pytest-mypy @@ -11695,7 +11692,6 @@ (define-public python-jaraco-collections ;; TODO: Add python-pytest-ruff to native-inputs once it has been ;; packaged. (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-mypy @@ -11755,7 +11751,6 @@ (define-public python-jaraco-context #:test-flags '(list "-k" "not project"))) (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-flake8 python-pytest-mypy @@ -11789,7 +11784,6 @@ (define-public python-jaraco-functools (native-inputs (list python-jaraco-classes python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-flake8 python-pytest-mypy @@ -11849,7 +11843,6 @@ (define-public python-jaraco-test (list #:test-flags '(list "-k" "http"))) (propagated-inputs (list python-jaraco-context python-jaraco-functools)) (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-flake8 @@ -11882,7 +11875,6 @@ (define-public python-jaraco-text ;; TODO: Add python-pytest-ruff to native-inputs once it has been ;; packaged. (native-inputs (list python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-mypy @@ -16260,8 +16252,7 @@ (define-public python-legacy-api-wrap "06qhp0g543dy98vpa41hwdalvdbsjfc3ldk474yr9sd75mhl8jh3")))) (build-system python-build-system) (propagated-inputs - (list python-get-version python-pytest python-pytest-black - python-setuptools)) + (list python-get-version python-pytest python-setuptools)) (home-page "https://github.com/flying-sheep/legacy-api-wrap") (synopsis "Legacy API wrapper") (description "This module defines a decorator to wrap legacy APIs. The @@ -16521,7 +16512,6 @@ (define-public python-path python-packaging python-pygments python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-flake8 @@ -16626,7 +16616,6 @@ (define-public python-pip-run (append python-nbformat python-pygments python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-flake8 @@ -21062,7 +21051,6 @@ (define-public python-inflect (propagated-inputs (list python-pydantic)) (native-inputs (list python-pygments python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-flake8 @@ -24092,7 +24080,8 @@ (define-public python-isort (arguments (list #:test-flags '(list "tests/unit/" "-k" "not test_gitignore" - "--ignore=tests/unit/test_deprecated_finders.py") + "--ignore=tests/unit/test_deprecated_finders.py" + "--ignore=tests/unit/profiles/test_black.py") #:phases #~(modify-phases %standard-phases (add-after 'install 'install-example-plugins @@ -24110,8 +24099,7 @@ (define-public python-isort (apply invoke "pip" "--no-cache-dir" "--no-input" "install" "--user" "--no-deps" example-whls))))))) (native-inputs - (list python-black - python-colorama + (list python-colorama python-hypothesmith python-libcst-minimal python-natsort @@ -25911,7 +25899,6 @@ (define-public python-tempora (native-inputs (list python-freezegun python-pytest - python-pytest-black python-pytest-checkdocs python-pytest-enabler python-pytest-flake8 From patchwork Sat Jun 1 15:37:00 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28154 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 5CAA127BBE2; Sat, 1 Jun 2024 16:41:19 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id E670B27BBEB for ; Sat, 1 Jun 2024 16:41:16 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQqj-0001wo-BG; Sat, 01 Jun 2024 11:40:53 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQqh-0001uo-Iz for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:51 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQqh-0008Bz-Ac for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:51 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQqt-0003lW-0n for guix-patches@gnu.org; Sat, 01 Jun 2024 11:41:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 28/32] build-system/pyproject: Remove python-pytest-flake8 native-input. 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[native-inputs]: Remove python-pytest-flake8. * gnu/packages/python-web.scm (python-mechanicalsoup, python-tinycss2)[native-inputs]: Remove python-pytest-flake8. (python-tinycss): [arguments]<#:test-flags>: Ignore flake8 tests. [native-inputs]: Remove python-pytest-flake8. * gnu/packages/python-xyz.scm (python-importlib-resources, python-jaraco-classes, python-jaraco-context, python-jaraco-functools, python-jaraco-packaging, python-jaraco-test, python-path, python-pip-run, python-inflect, python-tempora, python-cairosvg) [native-inputs]: Remove python-pytest-flake8. Change-Id: I60ad04391d1c4b081e3293d50b3ac93c6430c7bf --- gnu/packages/check.scm | 2 -- gnu/packages/dav.scm | 1 - gnu/packages/jupyter.scm | 1 - gnu/packages/python-check.scm | 5 +++-- gnu/packages/python-web.scm | 10 ++++------ gnu/packages/python-xyz.scm | 13 +------------ 6 files changed, 8 insertions(+), 24 deletions(-) diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index f8ead8df4e4..e8f121e9fe9 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -2492,7 +2492,6 @@ (define-public python-pytest-enabler python-toml)) (native-inputs (list python-pytest python-pytest-checkdocs - python-pytest-flake8 python-pytest-mypy python-setuptools python-setuptools-scm @@ -2665,7 +2664,6 @@ (define-public python-pytest-perf (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-flake8 python-pytest-mypy python-setuptools python-wheel)) diff --git a/gnu/packages/dav.scm b/gnu/packages/dav.scm index 99284220846..b5a1ba749d8 100644 --- a/gnu/packages/dav.scm +++ b/gnu/packages/dav.scm @@ -58,7 +58,6 @@ (define-public radicale (build-system python-build-system) (native-inputs (list python-pytest - python-pytest-flake8 python-pytest-runner python-waitress)) (propagated-inputs diff --git a/gnu/packages/jupyter.scm b/gnu/packages/jupyter.scm index 1745cd1f491..18b9c8db522 100644 --- a/gnu/packages/jupyter.scm +++ b/gnu/packages/jupyter.scm @@ -849,7 +849,6 @@ (define-public python-nbstripout (native-inputs (list python-pytest python-pytest-cram - python-pytest-flake8 python-pytest-runner python-setuptools python-wheel)) diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index 4643ce91e2e..e9903c89166 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -214,9 +214,10 @@ (define-public python-pytest-csv (base32 "17518f2fn5l98lyk9p8r7215c1whi61imzrh6ahrmcksr8w0zz04")))) (build-system pyproject-build-system) + (arguments + (list #:test-flags '(list "--ignore=tests/test_flake8.py"))) (native-inputs - (list python-pytest-flake8 - python-pytest-xdist + (list python-pytest-xdist python-setuptools python-tabulate python-wheel)) diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 98dc11a9e48..93f8394ee98 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -1579,8 +1579,7 @@ (define-public python-mechanicalsoup (propagated-inputs (list python-beautifulsoup4 python-lxml python-requests python-six)) (native-inputs - (list python-pytest-flake8 - python-pytest-httpbin + (list python-pytest-httpbin python-pytest-mock python-pytest-runner python-requests-mock @@ -5860,10 +5859,9 @@ (define-public python-tinycss (build-system pyproject-build-system) (arguments (list #:test-flags - '(list "-k" "not ISORT and not test_speedups"))) + '(list "-k" "not ISORT and not FLAKE8 and not test_speedups"))) (native-inputs - (list python-pytest-flake8 - python-pytest-runner + (list python-pytest-runner python-setuptools python-wheel)) (home-page "https://tinycss.readthedocs.io/") @@ -5906,7 +5904,7 @@ (define-public python-tinycss2 (propagated-inputs (list python-webencodings)) (native-inputs - (list python-flit python-pytest python-pytest-flake8 python-pytest-isort)) + (list python-flit python-pytest python-pytest-isort)) (home-page "https://tinycss2.readthedocs.io/") (synopsis "Low-level CSS parser for Python") (description "@code{tinycss2} can parse strings, return Python objects diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 8dd5bf2e9e3..88bea23d3b3 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -11533,7 +11533,6 @@ (define-public python-importlib-resources (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-flake8 python-pytest-mypy python-setuptools-57 python-setuptools-scm)) @@ -11661,7 +11660,6 @@ (define-public python-jaraco-classes (native-inputs (list python-pytest python-pytest-checkdocs - python-pytest-flake8 python-pytest-mypy python-setuptools python-setuptools-scm @@ -11752,7 +11750,6 @@ (define-public python-jaraco-context (native-inputs (list python-pytest python-pytest-checkdocs - python-pytest-flake8 python-pytest-mypy python-setuptools python-setuptools-scm @@ -11785,7 +11782,6 @@ (define-public python-jaraco-functools (list python-jaraco-classes python-pytest python-pytest-checkdocs - python-pytest-flake8 python-pytest-mypy python-setuptools python-setuptools-scm @@ -11815,7 +11811,6 @@ (define-public python-jaraco-packaging (propagated-inputs (list python-pytest python-pytest-checkdocs - python-pytest-flake8 python-rst.linker python-setuptools python-setuptools-scm @@ -11845,7 +11840,6 @@ (define-public python-jaraco-test (native-inputs (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-flake8 python-pytest-mypy python-setuptools python-wheel)) @@ -16514,7 +16508,6 @@ (define-public python-path python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-flake8 python-pytest-mypy))) (properties (alist-delete 'hidden? (package-properties @@ -16618,7 +16611,6 @@ (define-public python-pip-run python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-flake8 python-pytest-mypy))) (properties (alist-delete 'hidden? (package-properties python-pip-run-bootstrap))))) @@ -21053,7 +21045,6 @@ (define-public python-inflect python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-flake8 python-pytest-mypy ;; For the version number python-setuptools-scm @@ -25901,7 +25892,6 @@ (define-public python-tempora python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-flake8 python-pytest-freezegun python-pytest-mypy python-setuptools-scm @@ -29574,8 +29564,7 @@ (define-public python-cairosvg (list python-cairocffi python-cssselect2 python-defusedxml python-pillow python-tinycss2)) (native-inputs - (list python-pytest-flake8 - python-pytest-isort + (list python-pytest-isort python-pytest-runner python-setuptools python-wheel)) From patchwork Sat Jun 1 15:37:01 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28153 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 0E81E27BBE9; Sat, 1 Jun 2024 16:41:18 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5EB0B27BBF0 for ; Sat, 1 Jun 2024 16:41:13 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQqj-0001y1-G7; Sat, 01 Jun 2024 11:40:53 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQqi-0001vS-25 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:52 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQqh-0008Cx-Pe for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:51 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQqt-0003ld-Fb for guix-patches@gnu.org; Sat, 01 Jun 2024 11:41:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 29/32] build-system/pyproject: Remove python-pytest-mypy inputs. 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Change-Id: Ia36ca82e0327a886f9c5317e9ef4ffc35dc8ac9d --- gnu/packages/astronomy.scm | 4 +--- gnu/packages/check.scm | 1 - gnu/packages/python-web.scm | 1 - gnu/packages/python-xyz.scm | 17 ++--------------- gnu/packages/sphinx.scm | 2 -- 5 files changed, 3 insertions(+), 22 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 1510ecab6de..a670f3b12d9 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2228,7 +2228,6 @@ (define-public python-czml3 (native-inputs (list python-astropy python-pytest - python-pytest-mypy python-setuptools python-wheel)) (home-page "https://github.com/poliastro/czml3") @@ -2606,8 +2605,7 @@ (define-public python-poliastro python-flit-core python-pytest python-pytest-doctestplus - python-pytest-mpl - python-pytest-mypy)) + python-pytest-mpl)) (propagated-inputs (list python-astropy python-astroquery diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index e8f121e9fe9..8eac2b13563 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -2664,7 +2664,6 @@ (define-public python-pytest-perf (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-mypy python-setuptools python-wheel)) (propagated-inputs diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 93f8394ee98..f956ad5b0c2 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -313,7 +313,6 @@ (define-public python-portend (native-inputs (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-mypy python-setuptools python-wheel)) (home-page "https://github.com/jaraco/portend") diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 88bea23d3b3..1069f6292f8 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -4928,7 +4928,6 @@ (define-public python-portalocker "0lawjm736vs86wlnxc3qqh37l11z0yx81xq3dmrw33m86kaq2bh3")))) (build-system pyproject-build-system) (native-inputs (list python-pytest - python-pytest-mypy python-pytest-timeout python-redis python-setuptools @@ -11533,7 +11532,6 @@ (define-public python-importlib-resources (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-mypy python-setuptools-57 python-setuptools-scm)) (propagated-inputs @@ -11660,7 +11658,6 @@ (define-public python-jaraco-classes (native-inputs (list python-pytest python-pytest-checkdocs - python-pytest-mypy python-setuptools python-setuptools-scm python-wheel)) @@ -11692,7 +11689,6 @@ (define-public python-jaraco-collections (native-inputs (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-mypy python-setuptools python-wheel)) (home-page "https://github.com/jaraco/jaraco.collections") @@ -11750,7 +11746,6 @@ (define-public python-jaraco-context (native-inputs (list python-pytest python-pytest-checkdocs - python-pytest-mypy python-setuptools python-setuptools-scm python-wheel)) @@ -11782,7 +11777,6 @@ (define-public python-jaraco-functools (list python-jaraco-classes python-pytest python-pytest-checkdocs - python-pytest-mypy python-setuptools python-setuptools-scm python-wheel)) @@ -11840,7 +11834,6 @@ (define-public python-jaraco-test (native-inputs (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-mypy python-setuptools python-wheel)) (home-page "https://github.com/jaraco/jaraco.test") @@ -11871,7 +11864,6 @@ (define-public python-jaraco-text (native-inputs (list python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-mypy python-setuptools python-wheel)) (home-page "https://github.com/jaraco/jaraco.text") @@ -16507,8 +16499,7 @@ (define-public python-path python-pygments python-pytest python-pytest-checkdocs - python-pytest-enabler - python-pytest-mypy))) + python-pytest-enabler))) (properties (alist-delete 'hidden? (package-properties python-path-bootstrap))))) @@ -16610,8 +16601,7 @@ (define-public python-pip-run python-pygments python-pytest python-pytest-checkdocs - python-pytest-enabler - python-pytest-mypy))) + python-pytest-enabler))) (properties (alist-delete 'hidden? (package-properties python-pip-run-bootstrap))))) @@ -21045,7 +21035,6 @@ (define-public python-inflect python-pytest python-pytest-checkdocs python-pytest-enabler - python-pytest-mypy ;; For the version number python-setuptools-scm python-setuptools @@ -25893,7 +25882,6 @@ (define-public python-tempora python-pytest-checkdocs python-pytest-enabler python-pytest-freezegun - python-pytest-mypy python-setuptools-scm python-types-freezegun python-types-pytz @@ -32835,7 +32823,6 @@ (define-public python-loguru (propagated-inputs (list python-colorama)) (native-inputs (list python-colorama python-freezegun - python-mypy python-pre-commit python-pytest python-pytest-mypy-plugins diff --git a/gnu/packages/sphinx.scm b/gnu/packages/sphinx.scm index b977367ee35..3dbcce04b32 100644 --- a/gnu/packages/sphinx.scm +++ b/gnu/packages/sphinx.scm @@ -94,7 +94,6 @@ (define-public python-sphinx python-imagesize python-importlib-metadata python-jinja2 - python-mypy python-packaging python-pygments python-requests @@ -196,7 +195,6 @@ (define-public python-sphinx-5 python-imagesize python-importlib-metadata python-jinja2 - python-mypy python-packaging python-pygments python-requests From patchwork Sat Jun 1 15:37:02 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28142 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 3E35D27BBEB; Sat, 1 Jun 2024 16:41:03 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.9 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 1C30F27BBE2 for ; Sat, 1 Jun 2024 16:40:59 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQqk-00020v-R1; Sat, 01 Jun 2024 11:40:54 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQqi-0001wG-GA for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:52 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQqi-0008E4-7i for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:52 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQqt-0003lk-U3 for guix-patches@gnu.org; Sat, 01 Jun 2024 11:41:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 30/32] build-system/pyproject: Stop hiding options. 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(python-openapi-schema-validator, python-openapi-spec-validator) [arguments]<#:phases>: Remove 'remove-coverage-pytest-options phase. (python-cssselect2, python-tinycss2)[arguments]: Remove uneeded field. (python-jsonpickle)[arguments]<#:test-flags>: Remove uneeded test-flags. * gnu/packages/python-xyz.scm (python-cattrs) [arguments]<#:phases>: Remove arguments hiding coverage options. Change-Id: Ibe08ecfebf8a24259c8658918d98fe9e5a8925b7 --- gnu/packages/pdf.scm | 6 +--- gnu/packages/python-crypto.scm | 1 - gnu/packages/python-web.scm | 51 ++++------------------------------ gnu/packages/python-xyz.scm | 4 +-- 4 files changed, 7 insertions(+), 55 deletions(-) diff --git a/gnu/packages/pdf.scm b/gnu/packages/pdf.scm index 4e260d614de..16d4d9336e3 100644 --- a/gnu/packages/pdf.scm +++ b/gnu/packages/pdf.scm @@ -816,9 +816,6 @@ (define-public python-pydyf (sha256 (base32 "18q43g5d9455msipcgd5fvnh8m4a2rz189slzfg80yycjw66rshs")))) (build-system pyproject-build-system) - (arguments - (list - #:test-flags #~'("-c" "/dev/null"))) (propagated-inputs (list python-pillow)) (native-inputs (list ghostscript @@ -1635,8 +1632,7 @@ (define-public weasyprint (build-system pyproject-build-system) (arguments (list - #:test-flags #~(list "-c" "/dev/null" - "-n" (number->string (parallel-job-count))) + #:test-flags #~(list "-n" (number->string (parallel-job-count))) #:phases #~(modify-phases %standard-phases (add-after 'unpack 'patch-library-paths diff --git a/gnu/packages/python-crypto.scm b/gnu/packages/python-crypto.scm index 6965a330624..6139856a906 100644 --- a/gnu/packages/python-crypto.scm +++ b/gnu/packages/python-crypto.scm @@ -288,7 +288,6 @@ (define-public python-keyring (build-system pyproject-build-system) (arguments (list - #:test-flags '(list "-c" "/dev/null") ;avoid extra test dependencies #:phases #~(modify-phases %standard-phases (add-before 'check 'workaround-test-failure diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index f956ad5b0c2..ef786e59308 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -738,10 +738,7 @@ (define-public python-asgi-csrf (build-system pyproject-build-system) (arguments (list #:test-flags - ;; Provide a null config to avoid the extraneous dependency on - ;; python-pytest-coverage. - #~(list "-c" "/dev/null" - ;; Disable two failing tests (see: + #~(list ;; Disable two failing tests (see: ;; https://github.com/simonw/asgi-csrf/issues/24). "-k" (string-append "not (test_multipart " @@ -780,8 +777,7 @@ (define-public python-asgi-lifespan (arguments (list #:test-flags - '(list "-c" "/dev/null" ;ignore coverage-related options - "-k" + '(list "-k" (string-append ;; XXX: Some tests fail because of a 'lifespan.shutdown.failed' ;; extra event, perhaps because our version of trio is older. @@ -1529,10 +1525,7 @@ (define-public python-jsonpickle (build-system pyproject-build-system) (arguments (list - #:test-flags - ;; Prevent running the flake8 and black pytest plugins, which only tests - ;; style and frequently causes harmless failures. - '(list "-o" "addopts=''" "tests") + #:test-flags '(list "tests") #:phases '(modify-phases %standard-phases (add-before 'check 'pre-check @@ -2175,13 +2168,7 @@ (define-public python-openapi-schema-validator (list #:test-flags ;; This one returns 5 instead of 4 elements - '(list "-k" "not test_array_prefixitems_invalid") - #:phases - #~(modify-phases %standard-phases - (add-after 'unpack 'remove-coverage-pytest-options - (lambda _ - (substitute* "pyproject.toml" - (("^--cov.*") ""))))))) + '(list "-k" "not test_array_prefixitems_invalid"))) (native-inputs (list python-poetry-core python-pytest)) (propagated-inputs (list python-isodate @@ -2219,13 +2206,7 @@ (define-public python-openapi-spec-validator (list ;; These tests attempt to fetch resources from the Internet #:test-flags '(list "--ignore-glob=tests/integration/validation/**" - "-k" "not example") - #:phases - #~(modify-phases %standard-phases - (add-after 'unpack 'remove-coverage-pytest-options - (lambda _ - (substitute* "pyproject.toml" - (("^--cov.*") ""))))))) + "-k" "not example"))) (native-inputs (list python-poetry-core python-pytest)) @@ -2264,9 +2245,6 @@ (define-public python-openapi-core (list #:test-flags '(list "tests/unit" - ;; Ignore Pytest configuration in setup.cfg that adds - ;; unwanted flake8 and coverage options. - "-c" "/dev/null" "-k" (string-append ;; Type mismatches "not TestFlaskOpenAPIRequest" @@ -5892,14 +5870,6 @@ (define-public python-tinycss2 (sha256 (base32 "0zyc48vbmczpqj7f3f0d7zb3bz29fyj50dg0m6bbwbr5i88kq3sq")))) (build-system pyproject-build-system) - (arguments - (list - #:phases - #~(modify-phases %standard-phases - (add-before 'check 'remove-unwanted-dependencies - (lambda _ - (substitute* "pyproject.toml" - (("^addopts.*") ""))))))) (propagated-inputs (list python-webencodings)) (native-inputs @@ -5926,17 +5896,6 @@ (define-public python-cssselect2 (sha256 (base32 "1j2fcr217rsvkipsg6zjq03rl64rxnvb5hqqpx0dv58fhspvkywk")))) (build-system pyproject-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'disable-linters - ;; Their check fails; none of our business. - (lambda _ - (substitute* '("setup.py" "pyproject.toml") - (("'pytest-flake8',") "") - (("'pytest-isort',") "") - (("--flake8") "") - (("--isort") ""))))))) (propagated-inputs (list python-tinycss2)) (native-inputs diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 1069f6292f8..7bcd4c299c3 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -21318,9 +21318,7 @@ (define-public python-cattrs (substitute* "pyproject.toml" ;; Fix version string (("dynamic = \\[\"version\"\\]") - (string-append "version = \"" #$version "\"")) - ;; Just run pytest with no frills - (("addopts = \"-l.*") ""))))))) + (string-append "version = \"" #$version "\"")))))))) (native-inputs (list python-hatchling python-hatch-vcs From patchwork Sat Jun 1 15:37:03 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28149 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id F3E4427BBE2; 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Change-Id: Iba2670b47e479c20a3f4ae1c703ad9fe815e3764 --- gnu/packages/machine-learning.scm | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index a3c598ba1c8..cc33a3e9762 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -5082,8 +5082,7 @@ (define-public python-linear-operator python-pytorch python-scipy python-typeguard)) - (native-inputs (list python-flake8-print - python-pytest + (native-inputs (list python-pytest python-setuptools python-setuptools-scm)) (home-page "https://github.com/cornellius-gp/linear_operator/") From patchwork Sat Jun 1 15:37:04 2024 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Nicolas Graves X-Patchwork-Id: 28159 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id BCE9027BBE2; Sat, 1 Jun 2024 16:41:31 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.8 required=5.0 tests=BAYES_00,MAILING_LIST_MULTI, SPF_HELO_PASS,URIBL_BLOCKED,URIBL_SBL_A autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id A833627BBE9 for ; Sat, 1 Jun 2024 16:41:30 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1sDQqm-00024P-Og; Sat, 01 Jun 2024 11:40:56 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1sDQqj-0001xn-CN for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:53 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1sDQqj-0008Ej-2w for guix-patches@gnu.org; Sat, 01 Jun 2024 11:40:53 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1sDQqu-0003lz-Oh for guix-patches@gnu.org; Sat, 01 Jun 2024 11:41:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#70858] [PATCH python-team v2 32/32] gnu: abjad-ext-ipython: Remove uneeded inputs. 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[native-inputs]: Remove python-black, python-flake8, python-isort, python-mypy, python-pytest-cov, python-iniconfig, python-pytest-helpers-namespace. [propagated-inputs]: Remove python-sphinx-autodoc-typehints. Change-Id: Id337da7731bc04d69831096b31f52e0e4c6a13c0 --- gnu/packages/music.scm | 16 +++++----------- 1 file changed, 5 insertions(+), 11 deletions(-) diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm index fb9ff038de5..b87e6390f90 100644 --- a/gnu/packages/music.scm +++ b/gnu/packages/music.scm @@ -1790,7 +1790,9 @@ (define-public abjad-ext-ipython (substitute* "setup.py" ;; Don't require a specific version of abjad. (("abjad==") - "abjad>=")))) + "abjad>=") + ;; XXX: Remove unwanted dev dependencies. + (("\"(black|flake8|isort|mypy|pytest)[^,]*,") "")))) (replace 'check (lambda* (#:key tests? inputs outputs #:allow-other-keys) (when tests? @@ -1800,17 +1802,9 @@ (define-public abjad-ext-ipython (invoke "jupyter" "nbconvert" "--to=html" "--ExecutePreprocessor.enabled=True" "tests/test.ipynb"))))))) (native-inputs - (list lilypond - python-black - python-flake8 - python-iniconfig - python-isort - python-mypy - python-pytest - python-pytest-cov - python-pytest-helpers-namespace)) + (list lilypond python-pytest)) (propagated-inputs - (list abjad jupyter python-sphinx-autodoc-typehints)) + (list abjad jupyter)) (home-page "https://abjad.github.io") (synopsis "Abjad IPython Extension") (description