From patchwork Thu May 12 02:10:21 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2275 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 99EDB27BBEA; Thu, 12 May 2022 03:11:12 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 5E31F27BBE9 for ; Thu, 12 May 2022 03:11:12 +0100 (BST) Received: from localhost ([::1]:40084 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyIJ-0001kK-FD for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:11:11 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58394) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyIB-0001k9-NM for guix-patches@gnu.org; Wed, 11 May 2022 22:11:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45066) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyIB-0001cN-Ag for guix-patches@gnu.org; Wed, 11 May 2022 22:11:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyIB-00026z-2f for guix-patches@gnu.org; Wed, 11 May 2022 22:11:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 01/14] gnu: Add r-gpg. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:11:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214538022 (code B ref -1); Thu, 12 May 2022 02:11:02 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:10:53 +0000 Received: from localhost ([127.0.0.1]:38935 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI0-000259-RC for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:53 -0400 Received: from lists.gnu.org ([209.51.188.17]:49110) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyHw-00024q-6j for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:52 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58184) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHv-0001b0-Mx for guix-patches@gnu.org; Wed, 11 May 2022 22:10:48 -0400 Received: from mout02.posteo.de ([185.67.36.66]:52695) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHr-0001YG-3E for guix-patches@gnu.org; Wed, 11 May 2022 22:10:47 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 8B36C240107 for ; Thu, 12 May 2022 04:10:38 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321438; bh=46CoM0jhArtqUCSLZCliZSQYoA+fM9j+QT9/7iQ5S20=; h=From:To:Cc:Subject:Date:From; b=bMXbq6uvO2Fedh/VZMBfZFxYhQBHfsWClCpkL7BQz87NW/MlHUpONR4FXLJ5DVYWy ax5Rw6WS/jiZX3Q1g+EgJALj5vy5v3g1RrUKQJ4vX5n+NBoNpFVC1yoEk9PTbypbIV cHLviF7JOwuSQa+6jBxW88DwkRzvb5lEP0DEApkrgxk+mSbpD3ecb84Gc7Ew6JILVa eTNbqr36y8Md1yEuzYEwbY0bKaKuSPyQYV5WKcvKVfh5pTqO0qriPpLKdvJz6IMl+M l4X3vK8N/SrDT2DNZSawEiM09NVowUpJB0H13dITk8j/dMS3SqgB2fivwHcGOv4Msm SYFN93oQcQT0Q== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcF1CXYz6tm4; Thu, 12 May 2022 04:10:36 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:21 +0000 Message-Id: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.66; envelope-from=kyle@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5c05f20ea7..f69a7dd605 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -103,6 +103,7 @@ (define-module (gnu packages cran) #:use-module (gnu packages python-xyz) #:use-module (gnu packages sqlite) #:use-module (gnu packages statistics) + #:use-module (gnu packages gnupg) #:use-module (gnu packages tcl) #:use-module (gnu packages textutils) #:use-module (gnu packages tls) @@ -33255,3 +33256,29 @@ (define-public r-zoeppritz coefficients or scattering amplitudes, for seismological P and S-waves at an interface.") (license license:gpl2+))) + +(define r-gpg + (package + (name "r-gpg") + (version "1.2.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "gpg" version)) + (sha256 + (base32 + "1qc7w4d6frp0j4yk0q7slkj1mps80bv78lixcpw1shgx48rp41kh")))) + (properties `((upstream-name . "gpg"))) + (build-system r-build-system) + (propagated-inputs + `(("r-askpass" ,r-askpass) ("r-curl" ,r-curl))) + (inputs + `(("gpgme" ,gpgme) ("gnupg" ,gnupg))) + (native-inputs + `(("pkg-config" ,pkg-config) ("r-knitr" ,r-knitr))) + (home-page + "https://jeroen.cran.dev/gpg/https://github.com/jeroen/gpg") + (synopsis "GNU Privacy Guard for R") + (description + "Bindings to GnuPG for working with OpenGPG (RFC4880) cryptographic methods. Includes utilities for public key encryption, creating and verifying digital signatures, and managing your local keyring. Note that some functionality depends on the version of GnuPG that is installed on the system. On Windows this package can be used together with 'GPG4Win' which provides a GUI for managing keys and entering passphrases.") + (license license:expat))) From patchwork Thu May 12 02:10:22 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2276 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 5F0E227BBEA; Thu, 12 May 2022 03:11:14 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 2C91B27BBE9 for ; Thu, 12 May 2022 03:11:14 +0100 (BST) Received: from localhost ([::1]:40196 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyIL-0001mq-67 for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:11:13 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58396) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyIC-0001kI-B2 for guix-patches@gnu.org; Wed, 11 May 2022 22:11:04 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45068) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyIC-0001cU-1o for guix-patches@gnu.org; Wed, 11 May 2022 22:11:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyIB-00027E-Sr for guix-patches@gnu.org; Wed, 11 May 2022 22:11:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55380] [PATCH 02/14] gnu: Add r-piton. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:11:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 55380 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55380@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214558053 (code B ref -1); Thu, 12 May 2022 02:11:03 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:10:55 +0000 Received: from localhost ([127.0.0.1]:38945 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI1-00025K-8G for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:54 -0400 Received: from lists.gnu.org ([209.51.188.17]:49114) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyHw-00024r-O3 for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:52 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58222) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHw-0001b6-Jc for guix-patches@gnu.org; Wed, 11 May 2022 22:10:48 -0400 Received: from mout01.posteo.de ([185.67.36.65]:53531) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHr-0001YK-TQ for guix-patches@gnu.org; Wed, 11 May 2022 22:10:48 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id ECD19240026 for ; Thu, 12 May 2022 04:10:39 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321440; bh=5nPdbe7WQIKOsZcEkMOeO5V1lnleM1QyzJ6NmQbwfJ8=; h=From:To:Cc:Subject:Date:From; b=E6oXgS9N34n/sgW1WJbeCMeasw2/rCYj8jNPyLTD//t80tEsAra946ijFK2rCLSnV Pm0lDyGTCSgPnRs/i+2wUJdaoJVH6lq0gOeSooC7BqMTdQeKTSKWQeC0IoSbn6FyAp 7IMTElDqwLeEwJCjhh1l5Re539EuGHhaThCQYQHPa0m6GPn1Y0xA8FiSPlDjgIBIhF QmpKqtBibaXuubUNFWagFv22Yd+8SWp85u/dIvALyXh7qh8A/RgvUDNyBFhFSTkkoi iioW3Wnq8l5/bvpyRxmi50jQ+0b39R/Kkw4fo00weSEc1VU1dcmarWRNINEn7k8Us4 TMUeml+ojuyRg== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcG465kz6tm4; Thu, 12 May 2022 04:10:38 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:22 +0000 Message-Id: In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f69a7dd605..57166bacdc 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33257,6 +33257,28 @@ (define-public r-zoeppritz interface.") (license license:gpl2+))) +(define-public r-piton + (package + (name "r-piton") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "piton" version)) + (sha256 + (base32 "1krf6zi238m275nxjlpyayv8y2drbgs2kg19dpkqm0lmlz5y5ar8")))) + (properties `((upstream-name . "piton"))) + (build-system r-build-system) + (propagated-inputs (list r-rcpp)) + (home-page "https://github.com/Ironholds/piton") + (synopsis "Parsing Expression Grammars in Rcpp") + (description + "This package provides a wrapper around the 'Parsing Expression Grammar Template +Library', a C++11 library for generating Parsing Expression Grammars, that makes +it accessible within Rcpp. With this, developers can implement their own +grammars and easily expose them in R packages.") + (license license:expat))) + (define r-gpg (package (name "r-gpg") From patchwork Thu May 12 02:10:23 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2287 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 53AD127BBEA; Thu, 12 May 2022 03:12:53 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 1D35E27BBE9 for ; Thu, 12 May 2022 03:12:53 +0100 (BST) Received: from localhost ([::1]:45806 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJw-00052U-8r for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:52 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58548) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJ9-0002xn-QW for guix-patches@gnu.org; Wed, 11 May 2022 22:12:04 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45097) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJ9-0001sU-I4 for guix-patches@gnu.org; Wed, 11 May 2022 22:12:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJ9-0002BC-E8 for guix-patches@gnu.org; Wed, 11 May 2022 22:12:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 03/14] gnu: Add r-tidyxl. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214758230 (code B ref -1); Thu, 12 May 2022 02:12:03 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:15 +0000 Received: from localhost ([127.0.0.1]:38977 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIN-00028a-Ay for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:15 -0400 Received: from lists.gnu.org ([209.51.188.17]:49130) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI0-00025B-SQ for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:54 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58256) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI0-0001c5-1L for guix-patches@gnu.org; Wed, 11 May 2022 22:10:52 -0400 Received: from mout01.posteo.de ([185.67.36.65]:44267) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHs-0001YP-Gx for guix-patches@gnu.org; Wed, 11 May 2022 22:10:51 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 334A6240026 for ; Thu, 12 May 2022 04:10:41 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321441; bh=SFGNVBsIUjXgwwJPNaygkR66wGdK0PzMdPEpZXWTPF8=; h=From:To:Cc:Subject:Date:From; b=BruIgMwFz3dSWBFjRMGvEwuRC9I1Q1jRxXNO72w3CWY0lottLxtOA1iRP8ouBcDx3 o0ag80HS0NuFGJwSlD9GoYg7cNuim/rQXTvIC+9AqSLfXLBTaVyxgsYEawB6fROyDG wECGvIFWq7ZOeLbkSmmsUR1lw/kHBOUBT+dryDmbxPlfd93lFnyxHj80/zNbalP0ma ZPY2BywV9cIwd1Y0b1kXwWzIXWGlLcm+EjAB5L4fBZrjOFtQXDpQGECZxiQXYlFv0D TqVofYpmvtFZsTzBUW/1B99u+UO0kToGFrLr+BFgOeXp7o4C/GrOECJrrxNiMoSbLx 9THZbKe7c9r8g== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcJ05Brz6tm4; Thu, 12 May 2022 04:10:39 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:23 +0000 Message-Id: In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 57166bacdc..9578263789 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33279,6 +33279,30 @@ (define-public r-piton grammars and easily expose them in R packages.") (license license:expat))) + +(define-public r-tidyxl + (package + (name "r-tidyxl") + (version "1.0.7") + (source + (origin + (method url-fetch) + (uri (cran-uri "tidyxl" version)) + (sha256 + (base32 "1wg8h5fd2hd8ilshrbcs99q18p15687dx8j51v5pyd30pg5cab7b")))) + (properties `((upstream-name . "tidyxl"))) + (build-system r-build-system) + (propagated-inputs (list r-piton r-rcpp)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/nacnudus/tidyxl") + (synopsis "Read Untidy Excel Files") + (description + "Imports non-tabular from Excel files into R. Exposes cell content, position and +formatting in a tidy structure for further manipulation. Tokenizes Excel +formulas. Supports '.xlsx' and '.xlsm' via the embedded 'RapidXML' C++ library +. Does not support '.xlsb' or '.xls'.") + (license license:gpl3))) + (define r-gpg (package (name "r-gpg") From patchwork Thu May 12 02:10:24 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2278 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 8216827BBEA; Thu, 12 May 2022 03:12:14 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 4828327BBE9 for ; Thu, 12 May 2022 03:12:14 +0100 (BST) Received: from localhost ([::1]:42324 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJJ-0002xp-F2 for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:13 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58542) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJ8-0002vj-Kq for guix-patches@gnu.org; Wed, 11 May 2022 22:12:02 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45094) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJ8-0001sC-Bb for guix-patches@gnu.org; Wed, 11 May 2022 22:12:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJ8-0002Ao-7P for guix-patches@gnu.org; Wed, 11 May 2022 22:12:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 04/14] gnu: Add r-unpivotr. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214748208 (code B ref -1); Thu, 12 May 2022 02:12:02 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:14 +0000 Received: from localhost ([127.0.0.1]:38959 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI7-00026Q-7p for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:13 -0400 Received: from lists.gnu.org ([209.51.188.17]:49128) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI0-00025A-RN for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:53 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58254) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHz-0001c4-Vp for guix-patches@gnu.org; Wed, 11 May 2022 22:10:52 -0400 Received: from mout02.posteo.de ([185.67.36.66]:45875) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHs-0001Yb-2H for guix-patches@gnu.org; Wed, 11 May 2022 22:10:51 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id A1D02240108 for ; Thu, 12 May 2022 04:10:42 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321442; bh=yZKB90Kap6YOmHgp7UfEDJEcqXeaSmT9o7jnyXazXhs=; h=From:To:Cc:Subject:Date:From; b=C8N1XZrgeoB8oIR2GV1wAhDCeZ3kvdoc+5rzbbGni96LgQqkdH3zZcvKLvfXO5F81 CmxB9vkCIOtX9bxKCuie7LI27VPIrqckZ9q2jpBK1AKX46PcsMv8cjDuJqQNBIKszB gu7Bp6j+5NmueDOchSkmZwUjN6PERNsJ7ETXlWqtYbBLxBFCfyc0mwjXZ4qfcA0mZu xDUURyMhMwjTIDya9qhQ0/i7QXO7h+VVHOqp8FLodhSAZbvBraWy1l+RlImGVrDPNJ Ew5YzvYx5SzbIgMFVppv2v4BgSTiVAZjcvdZutrJPBJ32Aw9wpIXX7b04ywKK2Q3il QLDEQzLVGhe6w== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcK37lkz6tnJ; Thu, 12 May 2022 04:10:41 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:24 +0000 Message-Id: <1f41a6214bca3a6d4ce93866e9c4467319309084.1651893551.git.kyle@posteo.net> In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.66; envelope-from=kyle@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 35 +++++++++++++++++++++++++++++++++++ 1 file changed, 35 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 9578263789..213f810d04 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33303,6 +33303,41 @@ (define-public r-tidyxl . Does not support '.xlsb' or '.xls'.") (license license:gpl3))) +(define-public r-unpivotr + (package + (name "r-unpivotr") + (version "0.6.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "unpivotr" version)) + (sha256 + (base32 "1paqx2jn8gh4nd4zm8iwxpf38znzwwqli62ww7f3k5vwkf34r078")))) + (properties `((upstream-name . "unpivotr"))) + (build-system r-build-system) + (propagated-inputs + (list r-cellranger + r-dplyr + r-forcats + r-magrittr + r-pillar + r-purrr + r-rlang + r-tibble + r-tidyr + r-tidyselect + r-xml2)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/nacnudus/unpivotr") + (synopsis "Unpivot Complex and Irregular Data Layouts") + (description + "Tools for converting data from complex or irregular layouts to a columnar +structure. For example, tables with multilevel column or row headers, or +spreadsheets. Header and data cells are selected by their contents and +position, as well as formatting and comments where available, and are associated +with one other by their proximity in given directions. Functions for data +frames and HTML tables are provided.") + (license license:expat))) (define r-gpg (package (name "r-gpg") From patchwork Thu May 12 02:10:25 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2277 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 692F327BBEA; Thu, 12 May 2022 03:11:21 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 2FECD27BBE9 for ; Thu, 12 May 2022 03:11:21 +0100 (BST) Received: from localhost ([::1]:40772 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyIS-00023U-CB for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:11:20 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58404) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyID-0001lK-7O for guix-patches@gnu.org; Wed, 11 May 2022 22:11:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45070) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyIC-0001ce-R0 for guix-patches@gnu.org; Wed, 11 May 2022 22:11:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyIC-00027S-NB for guix-patches@gnu.org; Wed, 11 May 2022 22:11:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55381] [PATCH 05/14] gnu: Add r-unglue. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:11:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 55381 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55381@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214558060 (code B ref -1); Thu, 12 May 2022 02:11:04 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:10:55 +0000 Received: from localhost ([127.0.0.1]:38949 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI2-00025v-Oi for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:55 -0400 Received: from lists.gnu.org ([209.51.188.17]:49126) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI0-000258-Qw for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:53 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58242) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHz-0001c3-NY for guix-patches@gnu.org; Wed, 11 May 2022 22:10:52 -0400 Received: from mout01.posteo.de ([185.67.36.65]:53623) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHt-0001Yo-Is for guix-patches@gnu.org; Wed, 11 May 2022 22:10:51 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 13B28240026 for ; Thu, 12 May 2022 04:10:44 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321444; bh=BYDD/eo6/IoMOLDr7hZLfkPrGafH+RSIAyJj/Veas+s=; h=From:To:Cc:Subject:Date:From; b=pSJhdJYXo6WmLpY/65UmOFANaQfQS6uog49qW/b4zoVNa4TEmlSYtjOwMvNInInwN Ga3O2pG5K7+CJxky/aTCkoTfGMt8y0YqSPkvVTVDjlDmWyr33uKjX3iYyPBMrMYIdq F/PqueG67opw93BmA5cfciOGxT/i3zXMEs9NZLyOzNUxSwIOM9HtLf9XBurg9OkxEv GsaBEJXNDXm3v5kkRFHCw7TnNyZphhzK18mjH22LJI69+AkYikw9JZ+t7bh3tBdS4c eTlkSv44NDA+gomK7+OKmyqWtOw9Cli+MI6dqEMclNDywURM7Kj3F9qwe6GPDfy8EU 2z57pDQnh6cRA== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcL6DB8z6tm4; Thu, 12 May 2022 04:10:42 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:25 +0000 Message-Id: <20c51184bbe6034ed7b4be6fc3f2b36f212ea60e.1651893551.git.kyle@posteo.net> In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 213f810d04..516c335822 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33338,6 +33338,26 @@ (define-public r-unpivotr with one other by their proximity in given directions. Functions for data frames and HTML tables are provided.") (license license:expat))) + +(define-public r-unglue + (package + (name "r-unglue") + (version "0.1.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "unglue" version)) + (sha256 + (base32 "0w8ld4xllx0lj1jz8i2sj92f8136hlwri1d8ldpg1ymxj7aw93vg")))) + (properties `((upstream-name . "unglue"))) + (build-system r-build-system) + (home-page "https://cran.r-project.org/package=unglue") + (synopsis "Extract Matched Substrings Using a Pattern") + (description + "Use syntax inspired by the package 'glue' to extract matched substrings in a +more intuitive and compact way than by using standard regular expressions.") + (license license:gpl3))) + (define r-gpg (package (name "r-gpg") From patchwork Thu May 12 02:10:26 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2281 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 57C2827BBEA; Thu, 12 May 2022 03:12:24 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 1A3B727BBE9 for ; Thu, 12 May 2022 03:12:24 +0100 (BST) Received: from localhost ([::1]:43106 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJT-0003XX-4X for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:23 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58544) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJ9-0002wT-2O for guix-patches@gnu.org; Wed, 11 May 2022 22:12:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45095) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJ8-0001sI-Pi for guix-patches@gnu.org; Wed, 11 May 2022 22:12:02 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJ8-0002Av-Ko for guix-patches@gnu.org; Wed, 11 May 2022 22:12:02 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 06/14] gnu: Add r-vcdextra. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214748215 (code B ref -1); Thu, 12 May 2022 02:12:02 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:14 +0000 Received: from localhost ([127.0.0.1]:38973 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIM-00028L-0b for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:14 -0400 Received: from lists.gnu.org ([209.51.188.17]:49136) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI1-00025J-7d for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:54 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58298) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI1-0001dj-3F for guix-patches@gnu.org; Wed, 11 May 2022 22:10:53 -0400 Received: from mout01.posteo.de ([185.67.36.65]:47273) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHu-0001Yw-Rd for guix-patches@gnu.org; Wed, 11 May 2022 22:10:51 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 7E017240027 for ; Thu, 12 May 2022 04:10:45 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321445; bh=e7hqJuIgts85f/0Frc3M9ob40Yx4O3UTqVrZkXA/Ieo=; h=From:To:Cc:Subject:Date:From; b=F1QOHT84RTbf7H97htFpIPwUf0Zjv0kVlAIPY+GEty+97PQqw+jNluIYFcU+25ZHE Ra0N39Na5x+DO39QFMY+PXRfdFbg365pvDSUB5cKqcSJ3r5HfMc5vdxGqd6Co6bi75 tu22KLvK3JN9ZAIlmCVRy3Qz7VMkxf9U8ZHkrXnq0GEk9f1EVDYAq6CFnSqLVB2foC CmVcBG5Cou3D8W/VMM+R0uH8Lf1gJ4PgS060+B5RYa8ScaN84/998sP+rhzx7V3YPx EIlSD8S9GCpcS7musgq/96RsT9wrQEgAi1PQOe5ggZ1KFU4T47bwQNJjk+caGGXwtR ZvAkKuUuMR4rw== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcN2Bfzz6tm4; Thu, 12 May 2022 04:10:44 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:26 +0000 Message-Id: <74710027f542c8fbcececf8a3a3aad16fdd3a5a9.1651893551.git.kyle@posteo.net> In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 516c335822..2cd4b8d2a6 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33358,6 +33358,33 @@ (define-public r-unglue more intuitive and compact way than by using standard regular expressions.") (license license:gpl3))) +(define-public r-vcdextra + (package + (name "r-vcdextra") + (version "0.8-0") + (source + (origin + (method url-fetch) + (uri (cran-uri "vcdExtra" version)) + (sha256 + (base32 "1wv1ypjdvw639jlphwfpqgpjkk4ki98l2lfbpncsbpy9jpknjsmk")))) + (properties `((upstream-name . "vcdExtra"))) + (build-system r-build-system) + (propagated-inputs (list r-ca r-gnm r-mass r-vcd)) + (native-inputs (list r-knitr)) + (home-page "https://friendly.github.io/vcdExtra/") + (synopsis "'vcd' Extensions and Additions") + (description + "This package provides additional data sets, methods and documentation to +complement the 'vcd' package for Visualizing Categorical Data and the 'gnm' +package for Generalized Nonlinear Models. In particular, 'vcdExtra' extends +mosaic, assoc and sieve plots from 'vcd' to handle 'glm()' and 'gnm()' models +and adds a 3D version in 'mosaic3d'. Additionally, methods are provided for +comparing and visualizing lists of 'glm' and 'loglm' objects. This package is +now a support package for the book, \"Discrete Data Analysis with R\" by Michael +Friendly and David Meyer.") + (license license:gpl2+))) + (define r-gpg (package (name "r-gpg") From patchwork Thu May 12 02:10:27 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2279 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 3B57E27BBEA; Thu, 12 May 2022 03:12:15 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id E36C427BBE9 for ; Thu, 12 May 2022 03:12:14 +0100 (BST) Received: from localhost ([::1]:42368 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJK-00030a-0Y for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:14 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58546) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJ9-0002x6-DT for guix-patches@gnu.org; Wed, 11 May 2022 22:12:03 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45096) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJ9-0001sN-4a for guix-patches@gnu.org; Wed, 11 May 2022 22:12:03 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJ9-0002B5-0k for guix-patches@gnu.org; Wed, 11 May 2022 22:12:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 07/14] gnu: Add r-ca. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214758223 (code B ref -1); Thu, 12 May 2022 02:12:02 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:15 +0000 Received: from localhost ([127.0.0.1]:38975 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIM-00028S-CG for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:15 -0400 Received: from lists.gnu.org ([209.51.188.17]:49134) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI1-00025D-5P for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:54 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58296) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI0-0001di-Vo for guix-patches@gnu.org; Wed, 11 May 2022 22:10:53 -0400 Received: from mout02.posteo.de ([185.67.36.66]:48463) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHw-0001Z0-8N for guix-patches@gnu.org; Wed, 11 May 2022 22:10:52 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id E5D70240107 for ; Thu, 12 May 2022 04:10:46 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321446; bh=tzsHBgPL3fCmKHSzWKJOs1v44AihWTy8nCMflkSx3r0=; h=From:To:Cc:Subject:Date:From; b=il2dz9lsG0Gdsj9YvcElxTDhhLR9xbWh/aaDTFh6IC0H5I1cpVF2KZbCEZNVMVYc+ qBE/6Wa+Y+9cw1HOslObquZtVvbpVbkzA0eJ3hxwPk2u/877Ss5EUgJQTgDsOaopsL DsX39TONHugobZ5uPnlIxO1DsdHnd+HWFwcis2kLsSVGTLGMf3izYX3nL8yD32AqGZ nuzBeyr5oYZufh7pi+w3mGhOd1HhBZx33tXFuEqbp7AYFqylGgA19nkriY/uxwJF29 Vj6+5bxbFn8Ev+3U49BsJNex8EibcDJQbI3XUs3A4vyFhgMStQ4d/DodMcnE17v36V wDXILxOuPHGtA== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcP5HCJz6tm4; Thu, 12 May 2022 04:10:45 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:27 +0000 Message-Id: In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.66; envelope-from=kyle@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 2cd4b8d2a6..b5946070b0 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33385,6 +33385,26 @@ (define-public r-vcdextra Friendly and David Meyer.") (license license:gpl2+))) +(define-public r-ca + (package + (name "r-ca") + (version "0.71.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "ca" version)) + (sha256 + (base32 + "095lk7p2b9835hc3a03c4019wg0baf0dhz6c2vqpaq1m9k4jy304")))) + (properties `((upstream-name . "ca"))) + (build-system r-build-system) + (home-page "http://www.carme-n.org/") + (synopsis + "Simple, Multiple and Joint Correspondence Analysis") + (description + "Computation and visualization of simple, multiple and joint correspondence analysis.") + (license (list license:gpl2+ license:gpl3+)))) + (define r-gpg (package (name "r-gpg") From patchwork Thu May 12 02:10:28 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2284 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2C32327BBEA; Thu, 12 May 2022 03:12:33 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id EAF3927BBE9 for ; Thu, 12 May 2022 03:12:32 +0100 (BST) Received: from localhost ([::1]:44122 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJc-00047W-3Z for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:32 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58550) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJB-0002yj-0b for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45098) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJ9-0001sZ-VB for guix-patches@gnu.org; Wed, 11 May 2022 22:12:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJ9-0002BJ-Qc for guix-patches@gnu.org; Wed, 11 May 2022 22:12:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 08/14] gnu: Add r-qvcalc. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214838252 (code B ref -1); Thu, 12 May 2022 02:12:03 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:23 +0000 Received: from localhost ([127.0.0.1]:38979 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIN-00028h-M9 for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:23 -0400 Received: from lists.gnu.org ([209.51.188.17]:49142) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI3-000262-9z for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:58 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58322) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI3-0001gB-5g for guix-patches@gnu.org; Wed, 11 May 2022 22:10:55 -0400 Received: from mout02.posteo.de ([185.67.36.66]:48479) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHx-0001aS-L3 for guix-patches@gnu.org; Wed, 11 May 2022 22:10:54 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 5BAA4240107 for ; Thu, 12 May 2022 04:10:48 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321448; bh=UU3vUn+/t44y28F0SvBOA7s6ZX4dEXsXiRRXg7lQkdg=; h=From:To:Cc:Subject:Date:From; b=O98FRbA7B1nght0oVnsW075Z1Hhil2cQyft6AxDsWqaJZs/CFueGfvJyL0Ue+jnlW mxJyl3TItsGxLcytMwx5RrTjfCH9dNeB9EeoG+mO5B0lsjZpSWwKT6WWBDyy0X9nIl TU5oAoeJB5FLfvL989Xxkvu24LvxCnF8KQLHt5n1PYm762sKmUgC/EQvzKTmb6YdPX MuQCnC+ty4uigDO0krtt+1rG64/Yw56oc/UvLibD+qKrh+YiQHK1hkmpVOQqYjFJCr u7Sv1XQPDrCMrqvwxG8Khu7M0qjCTQRR93G30ynsoiOCcxvtHeTET73HioRNiknV6p QXUqMD8fZiKkg== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcR1PNfz6tm4; Thu, 12 May 2022 04:10:46 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:28 +0000 Message-Id: <00263f4ce3e94329d02543d712b64424a7b6d931.1651893551.git.kyle@posteo.net> In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.66; envelope-from=kyle@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b5946070b0..b86ab6127d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33405,6 +33405,27 @@ (define-public r-ca "Computation and visualization of simple, multiple and joint correspondence analysis.") (license (list license:gpl2+ license:gpl3+)))) +(define-public r-qvcalc + (package + (name "r-qvcalc") + (version "1.0.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "qvcalc" version)) + (sha256 + (base32 + "0banzv78kb53ybfbh1hmgx7kxvpbbdxzg4dsn7vrwhmxs72srkch")))) + (properties `((upstream-name . "qvcalc"))) + (build-system r-build-system) + (home-page "https://davidfirth.github.io/qvcalc") + (synopsis + "Quasi Variances for Factor Effects in Statistical Models") + (description + "This package provides functions to compute quasi variances and associated measures of approximation error.") + (license (list license:gpl2+ license:gpl3+)))) + + (define r-gpg (package (name "r-gpg") From patchwork Thu May 12 02:10:29 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2282 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 1C9A127BBEA; Thu, 12 May 2022 03:12:25 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id CD27227BBE9 for ; Thu, 12 May 2022 03:12:24 +0100 (BST) Received: from localhost ([::1]:43194 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJU-0003ao-0V for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:24 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58554) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJB-0002yp-2V for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45099) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJA-0001sa-B6 for guix-patches@gnu.org; Wed, 11 May 2022 22:12:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJA-0002BR-6x for guix-patches@gnu.org; Wed, 11 May 2022 22:12:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 09/14] gnu: Add r-gnm. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214878263 (code B ref -1); Thu, 12 May 2022 02:12:04 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:27 +0000 Received: from localhost ([127.0.0.1]:38981 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIV-000293-Kr for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:27 -0400 Received: from lists.gnu.org ([209.51.188.17]:49144) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI3-000263-A6 for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:58 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58324) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI3-0001gF-5f for guix-patches@gnu.org; Wed, 11 May 2022 22:10:55 -0400 Received: from mout01.posteo.de ([185.67.36.65]:34531) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyHz-0001aX-4M for guix-patches@gnu.org; Wed, 11 May 2022 22:10:54 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id C8DD3240026 for ; Thu, 12 May 2022 04:10:49 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321449; bh=18yYYDZnLwJuhS6/o8++HEJDMW3xwxHg0tAFygZUt0w=; h=From:To:Cc:Subject:Date:From; b=LHXhNsbsT1R+SuWnz2qO7fAhWBelzQaO24pGcyCzTZJB2CqKawu1gJsoyouxiBlF+ 9vKS2V4qX3pU5L4npfUoFjo1LIdhcvMBfuvfeXOPGSAxEX/+bvaXTFpGqYL40+rJui TB2QORMhZABztPcLXFhF6oFCA9ncW50wfuNAJWS0liJnrLyieD0MFaMQqk9r79xqjW h1C21asF2BRUhPzNTNV+YaJLsGpiChxQFDxQ6lNVkIZJBusu/wya8LHYZSW7h7afST FTUTMQGQ9avDLk+N/BeB0TDqzPfT/EkupxRMPHkalegBew22aOf1iJ350JGs7KWAbf gtnCx8r+h24Ng== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcS3TfFz6tm4; Thu, 12 May 2022 04:10:48 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:29 +0000 Message-Id: In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b86ab6127d..0114be8b0f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33405,6 +33405,27 @@ (define-public r-ca "Computation and visualization of simple, multiple and joint correspondence analysis.") (license (list license:gpl2+ license:gpl3+)))) +(define-public r-gnm + (package + (name "r-gnm") + (version "1.1-1") + (source + (origin + (method url-fetch) + (uri (cran-uri "gnm" version)) + (sha256 + (base32 + "1lddsdsg43wpg681s906i4xqqfbjdd1qb9ml5dfprb02i1806aa2")))) + (properties `((upstream-name . "gnm"))) + (build-system r-build-system) + (propagated-inputs + (list r-mass r-matrix r-nnet r-qvcalc r-relimp)) + (home-page "https://github.com/hturner/gnm") + (synopsis "Generalized Nonlinear Models") + (description + "This package provides functions to specify and fit generalized nonlinear models, including models with multiplicative interaction terms such as the UNIDIFF model from sociology and the AMMI model from crop science, and many others. Over-parameterized representations of models are used throughout; functions are provided for inference on estimable parameter combinations, as well as standard methods for diagnostics etc.") + (license (list license:gpl2+ license:gpl3+)))) + (define-public r-qvcalc (package (name "r-qvcalc") From patchwork Thu May 12 02:10:30 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2285 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id D239427BBEA; Thu, 12 May 2022 03:12:33 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 9909527BBE9 for ; Thu, 12 May 2022 03:12:33 +0100 (BST) Received: from localhost ([::1]:44220 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJc-0004AO-QW for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:32 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58562) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJC-00031y-8m for guix-patches@gnu.org; Wed, 11 May 2022 22:12:06 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45103) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJB-0001t8-Vs for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJB-0002Bu-RV for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 10/14] gnu: Add r-relimp. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:05 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523215038310 (code B ref -1); Thu, 12 May 2022 02:12:05 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:43 +0000 Received: from localhost ([127.0.0.1]:38989 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIl-00029p-Ew for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:43 -0400 Received: from lists.gnu.org ([209.51.188.17]:49152) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI5-00026A-Oh for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:02 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58332) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI4-0001hB-Ks for guix-patches@gnu.org; Wed, 11 May 2022 22:10:57 -0400 Received: from mout01.posteo.de ([185.67.36.65]:59769) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI0-0001ah-Oa for guix-patches@gnu.org; Wed, 11 May 2022 22:10:55 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 39E77240026 for ; Thu, 12 May 2022 04:10:51 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321451; bh=U7+0ymfgX2CmjxsxjihQ2WzuBrZTc8MBLF1GJqIcFsk=; h=From:To:Cc:Subject:Date:From; b=i4HE+i2DA1+3xqOMU6cC6fdwSKmW4R8o+/y+hyHChnFz9pFKjH9gNPbYyCcaDiiCF XuHoDe2FgL3aMDMSm+VXM5NCPHJyqLbp7PxqpNpEa6OmJruVd8E9YJtbr+awFnNXKm iCNDtX3hyJ+8ZHJkLn/2unzd1vLBTNdupb9/fLn2YlwYQVnJBM/Bsks7vgRgrCTldt Lh5eM0ZrU6b89dmsuWk81iRSXK9P4nLZbBgcUaXmQEYQZS0E3EuK7CL7BBZRJzcwr0 dnZ2Y00ndQJ3SkuiI4uM9yXvj28qr9tQWHhIoRmdrsUwzl+du0t+qgf1ssAYuxKU+C tXpyfNzhxdNzg== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcV0L9tz6tm4; Thu, 12 May 2022 04:10:49 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:30 +0000 Message-Id: In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0114be8b0f..f578cdfa2a 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33446,6 +33446,26 @@ (define-public r-qvcalc "This package provides functions to compute quasi variances and associated measures of approximation error.") (license (list license:gpl2+ license:gpl3+)))) +(define-public r-relimp + (package + (name "r-relimp") + (version "1.0-5") + (source + (origin + (method url-fetch) + (uri (cran-uri "relimp" version)) + (sha256 + (base32 + "0ydn82g8xdqzhf34187080bbpcpw1zdjbj2i3dv1d6d35vvprb5c")))) + (properties `((upstream-name . "relimp"))) + (build-system r-build-system) + (home-page "http://warwick.ac.uk/relimp") + (synopsis + "Relative Contribution of Effects in a Regression Model") + (description + "This package provides functions to facilitate inference on the relative importance of predictors in a linear or generalized linear model, and a couple of useful Tcl/Tk widgets.") + (license license:gpl2+))) + (define r-gpg (package From patchwork Thu May 12 02:10:31 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2288 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id B4BA527BBEA; Thu, 12 May 2022 03:13:00 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 4EEAB27BBE9 for ; Thu, 12 May 2022 03:13:00 +0100 (BST) Received: from localhost ([::1]:46276 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyK3-0005Dj-EX for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:59 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58552) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJB-0002yn-1f for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45100) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJA-0001sb-NX for guix-patches@gnu.org; Wed, 11 May 2022 22:12:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJA-0002BY-JI for guix-patches@gnu.org; Wed, 11 May 2022 22:12:04 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 11/14] gnu: Add r-picosat. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214918274 (code B ref -1); Thu, 12 May 2022 02:12:04 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:31 +0000 Received: from localhost ([127.0.0.1]:38983 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIZ-00029E-Qo for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:31 -0400 Received: from lists.gnu.org ([209.51.188.17]:49150) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI5-000269-Ni for submit@debbugs.gnu.org; Wed, 11 May 2022 22:10:59 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58336) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI5-0001hC-Jl for guix-patches@gnu.org; Wed, 11 May 2022 22:10:57 -0400 Received: from mout01.posteo.de ([185.67.36.65]:36703) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI2-0001bC-7y for guix-patches@gnu.org; Wed, 11 May 2022 22:10:57 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id D43C3240026 for ; Thu, 12 May 2022 04:10:52 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321452; bh=CPyUtHzn6IIuFaNmoEeDNxWj+zHaMPqzZOF/6iewbkU=; h=From:To:Cc:Subject:Date:From; b=D32E6E2Kj95QtLgjMQQhoosFVrlojYqMelCyoEwLnSCkmxElTkKSwOxok9K2baGa+ 0h5+oukaBpQ/u8Nk8O0TUdmlljIcTKFRCihh0STdowFHSt3yzCAFo4FiJcNysCg59d hJ9A2ST/J9D2dYmQKHjHLtKr4axvCgyyleKdRwaZ0EF6TBDp870a6wl5F94cd8YWjJ jU+UB3YQ2FIBkG7CUlwuecajJCo/I3RudvMGoF0EyztGD2fIRpJwRc7u6fNOKDxumq 3a3nYnRsDftbsnCRxni/IAPOmFRg1rqjxLHRkC/N9l+AMRWEInARiB2Cn5utrU93l5 VxlFnfSnSzYPA== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcW48Wfz6tm4; Thu, 12 May 2022 04:10:51 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:31 +0000 Message-Id: <39718183c1f2cb1ca010bcb905d5f1b44ac9a47f.1651893551.git.kyle@posteo.net> In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f578cdfa2a..0c7a3d55ff 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33466,6 +33466,27 @@ (define-public r-relimp "This package provides functions to facilitate inference on the relative importance of predictors in a linear or generalized linear model, and a couple of useful Tcl/Tk widgets.") (license license:gpl2+))) +(define-public r-rpicosat + (package + (name "r-rpicosat") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "rpicosat" version)) + (sha256 + (base32 + "1zj2d6jairmvya91vhv9kpkf34zmzl9vlha5yvfjj0j0apmqc0li")))) + (properties `((upstream-name . "rpicosat"))) + (build-system r-build-system) + (home-page + "https://github.com/dirkschumacher/rpicosat") + (synopsis + "R Bindings for the 'PicoSAT' SAT Solver") + (description + "Bindings for the 'PicoSAT' solver to solve Boolean satisfiability problems (SAT). The boolean satisfiability problem asks the question if a given boolean formula can be TRUE; i.e. does there exist an assignment of TRUE/FALSE for each variable such that the whole formula is TRUE? The package bundles 'PicoSAT' solver release 965 .") + (license license:expat))) + (define r-gpg (package From patchwork Thu May 12 02:10:32 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2280 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 8E99327BBEA; Thu, 12 May 2022 03:12:17 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 532E127BBE9 for ; Thu, 12 May 2022 03:12:17 +0100 (BST) Received: from localhost ([::1]:42520 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJM-00038B-Dy for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:16 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58556) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJB-000305-FJ for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45101) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJB-0001sp-4U for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJB-0002Bg-0Y for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 12/14] gnu: Add r-ryacas. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214958289 (code B ref -1); Thu, 12 May 2022 02:12:04 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:35 +0000 Received: from localhost ([127.0.0.1]:38985 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyId-00029P-P7 for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:35 -0400 Received: from lists.gnu.org ([209.51.188.17]:49156) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI7-00026W-K6 for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:00 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58366) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI7-0001hT-EV for guix-patches@gnu.org; Wed, 11 May 2022 22:10:59 -0400 Received: from mout01.posteo.de ([185.67.36.65]:39597) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI3-0001bM-IC for guix-patches@gnu.org; Wed, 11 May 2022 22:10:59 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id 1A9E7240026 for ; Thu, 12 May 2022 04:10:54 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321454; bh=yhhVckGE8bUDNHaMPDEfSdPBzARtlIzHk2swXnYmG5w=; h=From:To:Cc:Subject:Date:From; b=BMSVq4rWiObSsnIBXypwtY837bS6X9imF1PDf8htnESrenxz4oaGpdGTamySK46o+ drGlyC1soblpIGnZbaQrjNcZ6WCv1igRn9e/VYY8BxvQcO2wS94HnxaSEp+Q9Yp7D+ ovM6Urlq/XEfP+5eTtNeSjwrO32gnlekZUP0/Dj9hUXx8xSgtXJU5JG39XWA6gwCiq McaTOnFa9o54YX4yUhV2hl5pp78Y97qHoQUAdF07OtnowyDNnxa/zrKuRMo/7fw0RT woZK/RwBwJBMoMN5sSZVeMYiYdcqjtqiy1E9kr3+p/P3v1jECmmSQhL5fZ9o5Mxulr 5DMIz7Am68saw== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcX6WZ3z6tm4; Thu, 12 May 2022 04:10:52 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:32 +0000 Message-Id: <4ac9c8db561a0486186ed4daabb36c4e801f5179.1651893551.git.kyle@posteo.net> In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0c7a3d55ff..a2a29f8cdb 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33487,6 +33487,28 @@ (define-public r-rpicosat "Bindings for the 'PicoSAT' solver to solve Boolean satisfiability problems (SAT). The boolean satisfiability problem asks the question if a given boolean formula can be TRUE; i.e. does there exist an assignment of TRUE/FALSE for each variable such that the whole formula is TRUE? The package bundles 'PicoSAT' solver release 965 .") (license license:expat))) +(define-public r-ryacas + (package + (name "r-ryacas") + (version "1.1.3") + (source + (origin + (method url-fetch) + (uri (cran-uri "Ryacas" version)) + (sha256 + (base32 + "12vkylq06c7kqvvf662cyzhdcnpy928xsjflf1kf0nh6y00gywf8")))) + (properties `((upstream-name . "Ryacas"))) + (build-system r-build-system) + (propagated-inputs (list r-magrittr r-rcpp)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/r-cas/ryacas") + (synopsis + "R Interface to the 'Yacas' Computer Algebra System") + (description + "Interface to the 'yacas' computer algebra system ().") + (license (list license:gpl2+ license:gpl3+)))) + (define r-gpg (package From patchwork Thu May 12 02:10:33 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2283 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 67AA527BBEA; Thu, 12 May 2022 03:12:27 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 3166927BBE9 for ; Thu, 12 May 2022 03:12:27 +0100 (BST) Received: from localhost ([::1]:43408 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJW-0003jn-AQ for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:26 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58560) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJB-00030q-SK for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45102) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJB-0001sy-J6 for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJB-0002Bn-Ee for guix-patches@gnu.org; Wed, 11 May 2022 22:12:05 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 13/14] gnu: Add r-showimage. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:05 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523214998300 (code B ref -1); Thu, 12 May 2022 02:12:05 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:39 +0000 Received: from localhost ([127.0.0.1]:38987 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIh-00029e-HF for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:39 -0400 Received: from lists.gnu.org ([209.51.188.17]:49160) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyI8-00026d-Ch for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:00 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58374) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI7-0001hb-Vi for guix-patches@gnu.org; Wed, 11 May 2022 22:11:00 -0400 Received: from mout01.posteo.de ([185.67.36.65]:33209) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI6-0001bh-6V for guix-patches@gnu.org; Wed, 11 May 2022 22:10:59 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout01.posteo.de (Postfix) with ESMTPS id B6EFE240026 for ; Thu, 12 May 2022 04:10:55 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321455; bh=uWPp4drR4XvZnMEqFRN/5TsHzWjOybiCggQJUXl4BsQ=; h=From:To:Cc:Subject:Date:From; b=oND5WNTUUohlG9JBCdfZWy+u/shAuTZGwk9Zhaog1fu3mkCtXAnbmCil2L1u+VBet Po/ggHCpMrG3hM0oqNnM4VdQnKW6ZPM6LooZz2yeYCK9LcAptlXry/qk3KRdIIu6Y9 okkautK046KV4Z7cuIWNu+MCCmDS90/hORqF822PtR7ToluZZ1lCuJPB12y/ZzlA0V DQsOAKNj3L1UEaYW3Y4Igp4U/X824cpxYe/CUfg7DioQ7JVr09n1zSjO7gHyZ472OO rcFuK3lVA1kmHeB/kJ04qN2TRlnQLUxKVoR6Ote4rjStmUhKkaOMQcW4wBc4lgJx+d 2Qg0lsPFZ9E8A== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcZ3JHYz6tm4; Thu, 12 May 2022 04:10:54 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:33 +0000 Message-Id: In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.65; envelope-from=kyle@posteo.net; helo=mout01.posteo.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a2a29f8cdb..30ca01c0a0 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33509,6 +33509,28 @@ (define-public r-ryacas "Interface to the 'yacas' computer algebra system ().") (license (list license:gpl2+ license:gpl3+)))) +(define-public r-showimage + (package + (name "r-showimage") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "showimage" version)) + (sha256 + (base32 + "1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl")))) + (properties `((upstream-name . "showimage"))) + (build-system r-build-system) + (propagated-inputs (list r-png)) + (home-page + "https://github.com/r-lib/showimage#readme") + (synopsis + "Show an Image on an 'R' Graphics Device") + (description + "Sometimes it is handy to be able to view an image file on an 'R' graphics device. This package just does that. Currently it supports 'PNG' files.") + (license (list license:gpl2 license:gpl3)))) + (define r-gpg (package From patchwork Thu May 12 02:10:34 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: kyle X-Patchwork-Id: 2286 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 2F7AF27BBEA; Thu, 12 May 2022 03:12:42 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-2.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,SPF_HELO_PASS,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id EB26F27BBE9 for ; Thu, 12 May 2022 03:12:41 +0100 (BST) Received: from localhost ([::1]:44942 helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1noyJl-0004bk-54 for patchwork@mira.cbaines.net; Wed, 11 May 2022 22:12:41 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58564) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyJC-00034A-Rv for guix-patches@gnu.org; Wed, 11 May 2022 22:12:06 -0400 Received: from debbugs.gnu.org ([209.51.188.43]:45104) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1noyJC-0001tF-Cr for guix-patches@gnu.org; Wed, 11 May 2022 22:12:06 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1noyJC-0002C2-8f for guix-patches@gnu.org; Wed, 11 May 2022 22:12:06 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#55379] [PATCH 14/14] gnu: Add r-genoud. Resent-From: kyle Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 12 May 2022 02:12:06 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 55379 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 55379@debbugs.gnu.org Cc: Kyle Andrews X-Debbugs-Original-To: guix-patches@gnu.org Received: via spool by submit@debbugs.gnu.org id=B.16523215078325 (code B ref -1); Thu, 12 May 2022 02:12:06 +0000 Received: (at submit) by debbugs.gnu.org; 12 May 2022 02:11:47 +0000 Received: from localhost ([127.0.0.1]:38991 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyIp-00029z-Cq for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:47 -0400 Received: from lists.gnu.org ([209.51.188.17]:49200) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1noyID-00027e-0b for submit@debbugs.gnu.org; Wed, 11 May 2022 22:11:05 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:58400) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyIC-0001kx-SM for guix-patches@gnu.org; Wed, 11 May 2022 22:11:04 -0400 Received: from mout02.posteo.de ([185.67.36.66]:56303) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1noyI6-0001bp-I1 for guix-patches@gnu.org; Wed, 11 May 2022 22:11:04 -0400 Received: from submission (posteo.de [185.67.36.169]) by mout02.posteo.de (Postfix) with ESMTPS id 2C2E5240107 for ; Thu, 12 May 2022 04:10:57 +0200 (CEST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=posteo.net; s=2017; t=1652321457; bh=z+FIfcW8YtRDG11p4Co7Veaf/naSTEg8UvJYWdnXT6A=; h=From:To:Cc:Subject:Date:From; b=m8Xq5VV1wNFtwMxV5TpEcKrG/0qhvAAZ23c5z4lM6GzLnOpSBvQkeVvLk9W5qJG3X BmQmPKSvCfg3dl5zwvCvFeWzU0CC9G24kntMEGveEPsOooZlDPMOBNGA09jEieQBZM BVIXvvMggCBf/QfQGtjna/qBQ/J9+bgiiuCyhOH+xM+tpUZxRPVyLW2IU6yGnuHZ9Z toronKBb6n4wZ/wVuVF9iWR8NH5SdqrocnTWSIphcQYIwttkPM1uwN57CAXbyhvdjJ zWbguC4wejl59Iz2MShokTUdqCPmDynceu8c82is7nnG8EmtJpUzbA2Zqm90Z9aqTV K1yNt6fSk5cyA== Received: from customer (localhost [127.0.0.1]) by submission (posteo.de) with ESMTPSA id 4KzFcb6zKVz6tm4; Thu, 12 May 2022 04:10:55 +0200 (CEST) From: kyle Date: Thu, 12 May 2022 02:10:34 +0000 Message-Id: <70ddce67a95804b32dd72ae4cf53066c7b9aacd9.1651893551.git.kyle@posteo.net> In-Reply-To: References: MIME-Version: 1.0 Received-SPF: pass client-ip=185.67.36.66; envelope-from=kyle@posteo.net; helo=mout02.posteo.de X-Spam_score_int: -31 X-Spam_score: -3.2 X-Spam_bar: --- X-Spam_report: (-3.2 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_NONE=0.001, SPF_PASS=-0.001, T_SCC_BODY_TEXT_LINE=-0.01, URI_DOTEDU=1.246 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches From: Kyle Andrews --- gnu/packages/cran.scm | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 30ca01c0a0..2bd741d254 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -33531,6 +33531,26 @@ (define-public r-showimage "Sometimes it is handy to be able to view an image file on an 'R' graphics device. This package just does that. Currently it supports 'PNG' files.") (license (list license:gpl2 license:gpl3)))) +(define-public r-rgenoud + (package + (name "r-rgenoud") + (version "5.8-3.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "rgenoud" version)) + (sha256 + (base32 + "0p93wf6ghgz2nifxbscb6bhahh5jd2ba7nh1c2mb6fmbxnsi3swv")))) + (properties `((upstream-name . "rgenoud"))) + (build-system r-build-system) + (home-page "http://sekhon.berkeley.edu/rgenoud/") + (synopsis + "R Version of GENetic Optimization Using Derivatives") + (description + "This package provides a genetic algorithm plus derivative optimizer.") + (license license:gpl3))) + (define r-gpg (package