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Tue, 21 Dec 2021 14:24:00 -0800 (PST) MIME-Version: 1.0 From: Sharlatan Hellseher Date: Tue, 21 Dec 2021 22:23:49 +0000 Message-ID: X-Host-Lookup-Failed: Reverse DNS lookup failed for 2a00:1450:4864:20::330 (failed) Received-SPF: pass client-ip=2a00:1450:4864:20::330; envelope-from=sharlatanus@gmail.com; helo=mail-wm1-x330.google.com X-Spam_score_int: -12 X-Spam_score: -1.3 X-Spam_bar: - X-Spam_report: (-1.3 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, RDNS_NONE=0.793, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=no autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches -- … наш разум - превосходная объяснительная машина которая способна найти смысл почти в чем угодно, истолковать любой феномен, но совершенно не в состоянии принять мысль о непредсказуемости. From 4962c6e9fbdc542e8eee4b79714f4afd5da34b73 Mon Sep 17 00:00:00 2001 From: Sharlatan Hellseher Date: Tue, 21 Dec 2021 22:18:04 +0000 Subject: [PATCH] gnu: cl-ana: Update to 0.0.0-2.e051002 * gnu/packages/lisp-xyz.scm: Apply new style for inputs. [native-inputs]: Add openmpi and pkg-config to pass build for hdf-cffi [propagated-inputs]: Add gnuplot --- gnu/packages/lisp-xyz.scm | 104 ++++++++++++++++++++------------------ 1 file changed, 56 insertions(+), 48 deletions(-) diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm index 407d44e156..94a562bb84 100644 --- a/gnu/packages/lisp-xyz.scm +++ b/gnu/packages/lisp-xyz.scm @@ -85,6 +85,7 @@ (define-module (gnu packages lisp-xyz) #:use-module (gnu packages lisp-check) #:use-module (gnu packages maths) #:use-module (gnu packages mp3) + #:use-module (gnu packages mpi) #:use-module (gnu packages ncurses) #:use-module (gnu packages networking) #:use-module (gnu packages pkg-config) @@ -8103,57 +8104,64 @@ (define-public ecl-external-program (sbcl-package->ecl-package sbcl-external-program)) (define-public sbcl-cl-ana - (let ((commit "fa7cee4c50aa1c859652813049ba0da7c18a0df9") - (revision "1")) + (let ((commit "e05100296e2c755a39f48e803627e3c0fd0c6e1d") + (revision "2")) ;; 20211221T204115+0000 (package - (name "sbcl-cl-ana") - (version (git-version "0.0.0" revision commit)) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/ghollisjr/cl-ana") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 "0mr47l57m276dbpap7irr4fcnk5fgknhf6mgv4043s8h73amk5qh")))) - (build-system asdf-build-system/sbcl) - (native-inputs - (list sbcl-cl-fad)) - (inputs - `(("alexandria" ,sbcl-alexandria) - ("antik" ,sbcl-antik) - ("cffi" ,sbcl-cffi) - ("cl-csv" ,sbcl-cl-csv) - ("closer-mop" ,sbcl-closer-mop) - ("external-program" ,sbcl-external-program) - ("gsl" ,gsl) - ("gsll" ,sbcl-gsll) - ("hdf5" ,hdf5-parallel-openmpi) - ("iterate" ,sbcl-iterate) - ("libffi" ,libffi) - ("split-sequence" ,sbcl-split-sequence))) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'fix-paths - (lambda* (#:key inputs #:allow-other-keys) - (substitute* "hdf-cffi/hdf-cffi.lisp" - (("/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so") - (search-input-file inputs "/lib/libhdf5.so"))) - (substitute* "gsl-cffi/gsl-cffi.lisp" - (("define-foreign-library gsl-cffi" all) - (string-append all " (:unix " - (assoc-ref inputs "gsl") - "/lib/libgsl.so)"))) - #t))))) - (synopsis "Common Lisp data analysis library") - (description - "CL-ANA is a data analysis library in Common Lisp providing tabular and + (name "sbcl-cl-ana") + (version (git-version "0.0.0" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/ghollisjr/cl-ana") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "00gcgc2fnny526k92c2snp8iwd6shyf3j1hbbbhr3lxa1300rq5x")))) + (build-system asdf-build-system/sbcl) + (native-inputs + (list openmpi ;; for hdf-cffi + pkg-config + sbcl-cl-fad)) + (inputs + (list gsl + hdf5-parallel-openmpi + libffi + sbcl-antik + sbcl-cffi + sbcl-cl-csv + sbcl-closer-mop + sbcl-external-program + sbcl-gsll + sbcl-iterate + sbcl-alexandria + sbcl-split-sequence)) + (propagated-inputs + (list gnuplot)) ;; for gnuplot-interface + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-paths + (lambda* (#:key inputs #:allow-other-keys) + (substitute* "hdf-cffi/src/library.lisp" + (("libhdf5.so") + (search-input-file inputs "/lib/libhdf5.so"))) + (substitute* "gsl-cffi/gsl-cffi.lisp" + (("define-foreign-library gsl-cffi" all) + ;; NOTE: (Sharlatan-20211221T215949+0000): Preposed to + ;; upstream, modify package when it's merged. + ;; https://github.com/ghollisjr/cl-ana/pull/44 + (string-append all " (:unix " + (assoc-ref inputs "gsl") + "/lib/libgsl.so)"))) + #t))))) + (synopsis "Common Lisp data analysis library") + (description + "CL-ANA is a data analysis library in Common Lisp providing tabular and binned data analysis along with nonlinear least squares fitting and visualization.") - (home-page "https://github.com/ghollisjr/cl-ana") - (license license:gpl3)))) + (home-page "https://github.com/ghollisjr/cl-ana") + (license license:gpl3)))) (define-public cl-ana (sbcl-package->cl-source-package sbcl-cl-ana)) -- 2.34.0