diff mbox series

[bug#74115] gnu: Add r-fateid.

Message ID f24860f4f4504812ecf5d44c3ac945a22d06b136.1730313253.git.navid.afkhami@mdc-berlin.de
State New
Headers show
Series [bug#74115] gnu: Add r-fateid. | expand

Commit Message

Navid Afkhami Oct. 30, 2024, 6:34 p.m. UTC 
* gnu/packages/cran.scm (r-fateid): New variable.

Change-Id: If8d8dc20a0d377173a7428ebbfa238695a5d8002
---
 gnu/packages/cran.scm | 29 +++++++++++++++++++++++++++++
 1 file changed, 29 insertions(+)


base-commit: d6f775c30c6f47e174f6110d1089edc6315600e4
prerequisite-patch-id: 54292fa0b75533f02730e2da44993ad685d4a432
prerequisite-patch-id: 360575ef7e49c4e4e6b52644964df061856aee57
diff mbox series

Patch

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 212f305ba1..aa57134166 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -1038,6 +1038,35 @@  (define-public r-emdist
 Distance (EMD).")
     (license license:expat)))
 
+(define-public r-fateid
+  (package
+    (name "r-fateid")
+    (version "0.2.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "FateID" version))
+       (sha256
+        (base32 "0sgvaqhqkmmkcsl53bm1jlfpzrvzfb5cz8k513nizfsi638vydlm"))))
+    (properties `((upstream-name . "FateID")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-locfit
+                             r-matrixstats
+                             r-pheatmap
+                             r-princurve
+                             r-randomforest
+                             r-rcolorbrewer
+                             r-rtsne
+                             r-som
+                             r-umap))
+    (native-inputs (list r-knitr))
+    (home-page "https://cran.r-project.org/package=FateID")
+    (synopsis "Quantification of fate bias in multipotent progenitors")
+    (description
+     "This package computes cell fate bias for multi-lineage single-cell data.
+It also provides visualization tools for analyzing these biases.")
+    (license license:gpl3)))
+
 (define-public r-fuzzyjoin
   (package
     (name "r-fuzzyjoin")