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[86.8.111.200]) by smtp.gmail.com with ESMTPSA id 5b1f17b1804b1-4399bea8577sm74601855e9.0.2025.02.21.13.50.31 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Fri, 21 Feb 2025 13:50:32 -0800 (PST) From: Sharlatan Hellseher Date: Fri, 21 Feb 2025 21:49:31 +0000 Message-ID: X-Mailer: git-send-email 2.47.1 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-sunkit-image): Update to 0.6.0. [arguments] : Upstream resolved the issue, enable them. : Skip just one failing test, add "--numprocesses" option, upstream support parallel tests. [native-inputs]: Remove python-astroscrappy, python-beautifulsoup4, python-drms, python-importlib-resources, python-setuptools-scm, and python-zeep; add python-pytest, python-pytest-xdist, python-setuptools, python-setuptools-scm-next, and python-wheel. Change-Id: Ib95857c434946dd6633874b20113f931aa7bc3b0 --- gnu/packages/astronomy.scm | 40 +++++++++++++++----------------------- 1 file changed, 16 insertions(+), 24 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index a13a4c232d3..eb5baef06e9 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -3596,35 +3596,37 @@ (define-public python-specreduce (define-public python-sunkit-image (package (name "python-sunkit-image") - (version "0.5.1") + (version "0.6.0") (source (origin (method url-fetch) (uri (pypi-uri "sunkit_image" version)) (sha256 - (base32 "1wzii7dy0yb2lx0k8m3iak5vxc0wbybj5cdkvrk93sr14k9crqds")))) + (base32 "0gdbg3g8jxcgkwd34ls6342zj90m6ncas4f655q9dh79lqy7hhm8")))) (build-system pyproject-build-system) (arguments (list - ;; XXX: Disable as not compatible with Pytest 8+, check with upstream. - ;; - ;; pytest.PytestRemovedIn9Warning: Marks applied to fixtures have no - ;; effect - ;; - ;; See docs: . - #:tests? #f - ;; XXX: Check with upstram: assert False. #:test-flags - #~(list "-k" (string-append - "not test_fnrgf" - " and not test_calculate_solar_rotate_shift" - " and not test_mapsequence_solar_derotate")) + #~(list "--numprocesses" (number->string (parallel-job-count)) + ;; One test fails with assertion, probably in NumPy array + ;; precision calculation: np.allclose and + ;; sunpy.map.mapbase.GenericMap are not matched. + "--deselect=sunkit_image/tests/test_radial.py::test_fnrgf") #:phases #~(modify-phases %standard-phases (add-before 'check 'set-home (lambda _ ;; For tests: Permission denied: '/homeless-shelter' (setenv "HOME" "/tmp")))))) + (native-inputs + (list python-dask + python-pytest + python-pytest-astropy + python-pytest-mpl + python-pytest-xdist + python-setuptools + python-setuptools-scm-next + python-wheel)) (propagated-inputs (list python-astropy python-matplotlib @@ -3632,16 +3634,6 @@ (define-public python-sunkit-image python-scikit-image python-scipy python-sunpy)) - (native-inputs - (list python-astroscrappy - python-beautifulsoup4 - python-dask - python-drms - python-importlib-resources - python-pytest-astropy - python-pytest-mpl - python-setuptools-scm - python-zeep)) (home-page "https://github.com/sunpy/sunkit-image/") (synopsis "Solar Physics image processing toolbox") (description