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Mon, 26 Apr 2021 13:01:59 -0700 (PDT) MIME-Version: 1.0 From: Sharlatan Hellseher Date: Mon, 26 Apr 2021 20:01:48 +0000 Message-ID: Received-SPF: pass client-ip=2a00:1450:4864:20::32f; envelope-from=sharlatanus@gmail.com; helo=mail-wm1-x32f.google.com X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: "Guix-patches" X-getmail-retrieved-from-mailbox: Patches Hi Guix team! Here is my attempt to pack bulky python package - https://www.astropy.org/ I've disabled test and add minor modification removing `_compiler.c' file. Main license - https://docs.astropy.org/en/stable/license.html?highlight=license third party licenses - https://github.com/astropy/astropy/tree/main/licenses --- … наш разум - превосходная объяснительная машина которая способна найти смысл почти в чем угодно, истолковать любой феномен, но совершенно не в состоянии принять мысль о непредсказуемости. From 12680c01148cac6be095f1dfab8beae21977f6ef Mon Sep 17 00:00:00 2001 From: Sharlatan Hellseher Date: Mon, 26 Apr 2021 20:52:09 +0100 Subject: [PATCH] Gnu: Add Astropy * gnu/packages/astronomy.scm (python-astropy): New variable --- gnu/packages/astronomy.scm | 80 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 80 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 4660e141a4..c43c98f797 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -39,6 +39,7 @@ #:use-module (gnu packages gl) #:use-module (gnu packages glib) #:use-module (gnu packages gnome) + #:use-module (gnu packages graphviz) #:use-module (gnu packages gtk) #:use-module (gnu packages image) #:use-module (gnu packages libusb) @@ -51,11 +52,14 @@ #:use-module (gnu packages python-check) #:use-module (gnu packages python-crypto) #:use-module (gnu packages python-science) + #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) #:use-module (gnu packages qt) + #:use-module (gnu packages time) #:use-module (gnu packages version-control) #:use-module (gnu packages video) #:use-module (gnu packages xiph) + #:use-module (gnu packages xml) #:use-module (gnu packages xorg) #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) @@ -1034,3 +1038,79 @@ astronomical images, especially when there is no WCS information available.") "Skyfield computes positions for the stars, planets, and satellites in orbit around the Earth.") (license license:expat))) + +(define-public python-astropy + (package + (name "python-astropy") + (version "4.2.1") + (source + (origin + (method url-fetch) + ;; Source: https://github.com/astropy/astropy + (uri (pypi-uri "astropy" version)) + (sha256 + (base32 "09w4q64c6bykcdp8xdq5fgsdjqrcihqhqjszqjp3s5a1493kwj7d")))) + (build-system python-build-system) + (arguments + ;; NOTE: (Sharlatan-20210426T204315+0100): Tests require build astropy + ;; module, it needs a good review on how to enable them. + `(#:tests? #f + #:phases + (modify-phases %standard-phases + (add-before 'build 'setenv-astropy-system-all + (lambda _ + (setenv "ASTROPY_USE_SYSTEM_ALL" "1") + #t)) + ;; NOTE: (Sharlatan-20210426T200127+0100): it fails during install + ;; phases without the file is removed + ;; + ;; PermissionError: [Errno 13] Permission denied: './astropy/_compiler.c' + (add-before 'install 'remove-compiler-c + (lambda _ + (delete-file "astropy/_compiler.c") + #t)) + (add-before 'install 'makdir-astropy + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (mkdir-p + (string-append out "/astropy"))) + #t))))) + (native-inputs + `(("cfitsio" ,cfitsio) + ("coverage" ,python-coverage) + ("cython" ,python-cython) + ("extension-helpers" ,python-extension-helpers) + ("ipython" ,python-ipython) + ("objgraph" ,python-objgraph) + ("pkg-config" ,pkg-config) + ("setuptools-scm" ,python-setuptools-scm) + ("sgp4" ,python-sgp4) + ("skyfield" ,python-skyfield))) + (inputs + `(("asdf" ,python-asdf) + ("beautifulsoup4" ,python-beautifulsoup4) + ("bleach" ,python-bleach) + ("bottleneck" ,python-bottleneck) + ("cfitsio" ,cfitsio) + ("dask" ,python-dask) + ("expat" ,expat) + ("graphviz" ,graphviz) + ("h5py" ,python-h5py) + ("html5lib" ,python-html5lib) + ("jplephem" ,python-jplephem) + ("matplotlib" ,python-matplotlib) + ("mpmath" ,python-mpmath) + ("numpy" ,python-numpy) + ("pandas" ,python-pandas) + ("pyerfa" ,python-pyerfa) + ("pytz" ,python-pytz) + ("pyyaml" ,python-pyyaml) + ("scipy" ,python-scipy) + ("sortedcontainers" ,python-sortedcontainers) + ("wcslib" ,wcslib))) + (home-page "https://astropy.org/") + (synopsis "Astronomy and astrophysics core library") + (description + "Astropy Project is a single core package for Astronomy in Python and foster +interoperability between Python astronomy packages.") + (license license:bsd-3))) -- 2.31.1