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[86.8.111.200]) by smtp.gmail.com with ESMTPSA id 4fb4d7f45d1cf-5bebc081cf5sm7314559a12.90.2024.08.20.17.04.04 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Tue, 20 Aug 2024 17:04:04 -0700 (PDT) From: Sharlatan Hellseher Date: Wed, 21 Aug 2024 01:03:30 +0100 Message-ID: <9100ba5bc830f2d6431a3e32f6f148d6d1d8c08a.1724198118.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-pvextractor): New variable. Change-Id: I43589099c662cd73ac234a8581be6a559d2ddd6c --- gnu/packages/astronomy.scm | 48 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 48 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index fe74008f7e..38f9db1c8c 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1237,6 +1237,54 @@ (define-public python-glue-core across many files.") (license license:bsd-3))) +(define-public python-pvextractor + (package + (name "python-pvextractor") + (version "0.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pvextractor" version)) + (sha256 + (base32 "1kl33vg5rxmdwlk36pn8zqa7k7f43fb7w417fym6ygp86mci2spd")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags #~(list "--pyargs" "pvextractor") + #:phases + #~(modify-phases %standard-phases + ;; See . + (add-after 'unpack 'patch-regexp + (lambda _ + (substitute* "pvextractor/pvregions.py" + (("coordre = re.compile.*") + "coordre = re.compile(\"^[a-z]*\\\\((.*)\\\\)\")\n")))) + (add-before 'check 'prepare-x + (lambda _ + (system "Xvfb &") + (setenv "DISPLAY" ":0") + (setenv "HOME" "/tmp")))))) + (propagated-inputs + (list python-astropy + python-matplotlib + python-numpy + python-pyqt-6 + python-qtpy + python-scipy + python-spectral-cube)) + (native-inputs + (list python-pytest-astropy + python-setuptools-scm + xorg-server-for-tests)) + (home-page "http://pvextractor.readthedocs.io") + (synopsis "Position-Velocity diagram extractor") + (description + "The concept of the pvextractor package is simple - given a path defined +in sky coordinates, and a spectral cube, extract a slice of the cube along +that path, and along the spectral axis, producing a position-velocity or +position-frequency slice.") + (license license:bsd-3))) + (define-public python-pyxsim (package (name "python-pyxsim")