From patchwork Tue May 20 22:24:25 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 42795 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 07BE227BC49; Tue, 20 May 2025 23:27:10 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.4 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, RCVD_IN_DNSWL_BLOCKED,RCVD_IN_MSPIKE_H2,RCVD_IN_VALIDITY_CERTIFIED, RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE,SPF_HELO_PASS, URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 7FD7327BC4A for ; Tue, 20 May 2025 23:27:09 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1uHVPg-0006wT-1S; Tue, 20 May 2025 18:26:20 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1uHVPa-0006uE-1Q for guix-patches@gnu.org; Tue, 20 May 2025 18:26:14 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1uHVPY-0004zm-TX for guix-patches@gnu.org; Tue, 20 May 2025 18:26:13 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=pH4EkyMM0AXsZtzBarbUhp2qD7LQWOCpiaHlKr6dtEY=; b=J1m+SqmvjD+CEyKpbWs463SMqW+3bvzDyEAZgX2CXIbLMbfE4vZuKg6uCvvWr4NRXSnr1OX7p2CXe8dAQ0+BBIuYgL/VcwQWYoqeTgVqNW5UYQpQYnfSxbJ9B12gl1aWrAsNsbc3CA/eNj3CyqZ/Zi9HHXprclY4pqbhk6f69xw9X5ww8MvCxAgeRxdmAnR9VxyViFPwgyH+S34jHnhRVccoBfLdDqzzaXuTlFtv2RGfbUSokAVCZYn2KFq5AMYLnOm5zHEYPoMPOkr+/RNjxCZWQEYWo/cyDGSz2CtPT7NhPPTqS7mT4i7WiZ7p3QSW7UP378zaz/wy4/HrMygLyw==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1uHVPY-0004VR-Gq for guix-patches@gnu.org; Tue, 20 May 2025 18:26:12 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#78517] [PATCH 03/31] gnu: Add python-zeus-mcmc. Resent-From: Sharlatan Hellseher Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Tue, 20 May 2025 22:26:12 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 78517 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 78517@debbugs.gnu.org Cc: Sharlatan Hellseher Received: via spool by 78517-submit@debbugs.gnu.org id=B78517.174777992516842 (code B ref 78517); Tue, 20 May 2025 22:26:12 +0000 Received: (at 78517) by debbugs.gnu.org; 20 May 2025 22:25:25 +0000 Received: from localhost ([127.0.0.1]:38052 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1uHVOm-0004NU-Ov for submit@debbugs.gnu.org; Tue, 20 May 2025 18:25:25 -0400 Received: from mail-wr1-x429.google.com ([2a00:1450:4864:20::429]:55551) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.84_2) (envelope-from ) id 1uHVOZ-0004Gf-0z for 78517@debbugs.gnu.org; Tue, 20 May 2025 18:25:11 -0400 Received: by mail-wr1-x429.google.com with SMTP id ffacd0b85a97d-3a36e0d22c1so2063248f8f.2 for <78517@debbugs.gnu.org>; Tue, 20 May 2025 15:25:10 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20230601; t=1747779905; x=1748384705; darn=debbugs.gnu.org; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=pH4EkyMM0AXsZtzBarbUhp2qD7LQWOCpiaHlKr6dtEY=; b=e6Zs1vCSnErMzZXJkezqmEyKlws0JmCz79MHXiVQj3tY3ipNdVbHk4tA3iifA+uIYv qe0CdskxtiyLoQLW6RYnKLd/pz+GjFA+4Oz0hghtc03IqIkErMVbQkelihMCHLg6kgXG mu3Oz34W859ZqsC1AF7uDFe14ilKQqQnPUTVpxpLo1536ruuoBXKMXdql1Kpn13wfD39 jdHHCHz9THIvSyCYB7DMCzFOodrnA/pAjZSdbmtZ2IPo9Ah1L13b03J7K7cynaH3jreH aEj3DB4fWNHa8fl3Cq38DuxB6UKq8wLJnYi2SQ/hJKUUCudBMbUoPys1FlVCetodvZxX p6bw== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20230601; t=1747779905; x=1748384705; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=pH4EkyMM0AXsZtzBarbUhp2qD7LQWOCpiaHlKr6dtEY=; b=XriFq3sVgFxOZwHKupk9WMcjJKxA/nQ79sUSWv4IEhulHabH366mcexyhm3PINT4B6 ot+HAqzDP4jJr5fY331j8UObsUkVkIQChhBq5lREVN0m8U72G+lW6fclgA81qyu3P/+c dfJwK8BQ2ixPShKQ2FdkVufwyY3KFI/1DImAADUp3zHHyc2p3+J/1EQF8Nx5lGyBNAr2 9foPhFrmryy5y15VEG9cz7DvYxG0j7R28U/eWV8xehLJLyEPOikatKEAQFWw4bfr+E3L qQN0iwJX3PxN3dqCnSOCP8CthzuqrUxjAvscgtgD2vJY/kh+kYfPl7PK9YkX0zX0uzY9 GLYw== X-Gm-Message-State: AOJu0Yww5Gg20wpMQrIktk/Wnca91eAly/tRkhRzxJbuhq4J93gzWtoo rIErCSrLeY+DK3ODAEy34BmUW7IAvgareJDzsdJJUUuPLFdAkwCWzxkikAc8tw== X-Gm-Gg: ASbGncufNqfO4B6wQhTLg4teOxCZxYGIhm74Ma2dJvZ7f93hMonvGB/uTKuznkxusde DUYAE1KFoVbhNEVgbXUY7w0EeMo66KqulXWt8zm872/IGywW0UaizssERXs/2fDTnF2QReE+bYY /Zp7gUBtAyZSCC1yFbEBaIXZJr7iG0SRupybJaIJwbeoY/bwmg6o0xiREZzS8o3+mkzHS33a/wN F0VlBp8aZ/uBQjUfcNgy0Pe6njnnhh5KsKLcEMJhZjMeGTl/xUci24JfwBdBJz5vpHonwlhTIiA F/jQAP3PYRfI4cd+1RQSkxEFB+6Ygxz62S3qF4TYp0A/I9pIyiVUhxI5prXbal2u+PTnVp0LcW0 43mY9siiOl7ZqW3+EL/zcDMiMyso1pcovHhKA+RBxHmk+LWY= X-Google-Smtp-Source: AGHT+IEyLCqxtburSuKabU/ywTwMG7/gqzSrcWtPVyhvun8bd4h1ep+xOTiyGfQd4FfxyuxoInugvQ== X-Received: by 2002:a05:6000:178e:b0:3a0:b53a:bc06 with SMTP id ffacd0b85a97d-3a35fe5ba93mr14867253f8f.1.1747779904762; Tue, 20 May 2025 15:25:04 -0700 (PDT) Received: from localhost.localdomain (cpc100684-bagu15-2-0-cust967.1-3.cable.virginm.net. [86.8.111.200]) by smtp.gmail.com with ESMTPSA id ffacd0b85a97d-3a3620dbc6asm16438730f8f.88.2025.05.20.15.25.03 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Tue, 20 May 2025 15:25:04 -0700 (PDT) From: Sharlatan Hellseher Date: Tue, 20 May 2025 23:24:25 +0100 Message-ID: <878f75ffa0a76d9dc906a99659f246af71e32ebc.1747779547.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.49.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/statistics.scm (python-zeus-mcmc): New variable. Change-Id: Ibe7723ba4bbb301ef828744576508f0b0400f73f --- gnu/packages/statistics.scm | 41 +++++++++++++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 4b4d5664dc..34b209f872 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -1328,6 +1328,47 @@ (define-public python-resample @end itemize") (license license:bsd-3))) +(define-public python-zeus-mcmc + (package + (name "python-zeus-mcmc") + (version "2.5.4") + (source + (origin + (method git-fetch) ; no tests in PyPI + (uri (git-reference + (url "https://github.com/minaskar/zeus") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0sci442fx2bkkj8169hwnx6psl7m2r8y1cicn1xjxxgqaby5j8pi")))) + (build-system pyproject-build-system) + (native-inputs + (list python-pytest + python-setuptools + python-wheel)) + (propagated-inputs + (list python-matplotlib + python-numpy + python-scikit-learn + python-scipy + python-seaborn + python-setuptools + python-tqdm)) + (home-page "https://github.com/minaskar/zeus") + (synopsis "Deep learning energy measurement and optimization framework") + (description + "This package provides an implementation of the Ensemble Slice Sampling method. +Features: +@itemize +@item fast & Robust Bayesian Inference +@item efficient Markov Chain Monte Carlo (MCMC) +@item black-box inference, no hand-tuning +@item excellent performance in terms of autocorrelation time and convergence rate +@item scale to multiple CPUs without any extra effort +@item automated Convergence diagnostics +@end itemize") + (license license:asl2.0))) + (define-public r-rversions (package (name "r-rversions")