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envelope-from=alexis.simon@runbox.com; helo=mailtransmit04.runbox.com X-Spam_score_int: -27 X-Spam_score: -2.8 X-Spam_bar: -- X-Spam_report: (-2.8 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_LOW=-0.7, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-Mailman-Approved-At: Tue, 14 Jan 2025 11:17:40 -0500 X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Reply-to: Alexis Simon X-ACL-Warn: , Alexis Simon via Guix-patches X-Patchwork-Original-From: Alexis Simon via Guix-patches via From: Alexis Simon Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (python-cyvcf2): Update to 0.31.1 and fix build failure. Change-Id: Icc5057cf9f5e6ba141e6e29e8f4db657cd04c1d2 --- gnu/packages/bioinformatics.scm | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) base-commit: d663d4b6cae2289bcdd8bdcd02d58ed30769f1e2 diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 34a39a48f1..35f1a76fb1 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2357,7 +2357,7 @@ (define-public python-cmseq (define-public python-cyvcf2 (package (name "python-cyvcf2") - (version "0.30.28") + (version "0.31.1") (source (origin (method git-fetch) @@ -2366,7 +2366,7 @@ (define-public python-cyvcf2 (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "16yhfax509zyip8kkq2b0lflx5bdq5why7d785ayrqyzzq2rxqkk")) + (base32 "02x7ic2q4x3sfwx9n2sxg0a79iifjal0a68fqp9ljsfvdx4b7nq5")) (modules '((guix build utils))) (snippet ;; Delete bundled library @@ -2395,7 +2395,7 @@ (define-public python-cyvcf2 (setenv "CYTHONIZE" "1") (setenv "CYVCF2_HTSLIB_MODE" "EXTERNAL")))))) (inputs (list curl htslib libdeflate openssl zlib)) - (native-inputs (list python-cython python-pytest)) + (native-inputs (list python-cython python-pytest python-setuptools python-wheel)) (propagated-inputs (list python-click python-coloredlogs