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Change-Id: Ib62db1415ef3988ccef88ad600192246964b4d84 --- gnu/packages/bioconductor.scm | 32 ++++++++++++++++++++++++++++++++ 1 file changed, 32 insertions(+) base-commit: d22d2a05c389207f8cdcf824be7738b1499a987c diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index d3ff0b1127..dee72de2b7 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -7747,6 +7747,38 @@ (define-public r-hpar the Human Protein Atlas project.") (license license:artistic2.0))) +(define-public r-r3cseq + (package + (name "r-r3cseq") + (version "1.46.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "r3Cseq" version)) + (sha256 + (base32 "1wpjsiy9qh45h3k5s79w4zhkma5h4gvyf2sa8l934mx0jl16k0q2")))) + (properties `((upstream-name . "r3Cseq"))) + (build-system r-build-system) + (propagated-inputs + (list r-biostrings + r-data-table + r-genomeinfodb + r-genomicranges + r-iranges + r-qvalue + r-rcolorbrewer + r-rsamtools + r-rtracklayer + r-sqldf + r-vgam)) + (home-page "http://r3cseq.genereg.net/Site/index.html") + (synopsis + "Analysis of Chromosome conformation capture and Next-generation sequencing") + (description + "This package is used for the analysis of long-range chromatin interactions from +3C-seq assay.") + (license license:gpl3))) + (define-public r-raggedexperiment (package (name "r-raggedexperiment")