From patchwork Tue May 20 22:24:35 2025 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Sharlatan Hellseher X-Patchwork-Id: 42791 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 706D727BC4B; Tue, 20 May 2025 23:27:01 +0100 (BST) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-7.4 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, RCVD_IN_DNSWL_BLOCKED,RCVD_IN_MSPIKE_H2,RCVD_IN_VALIDITY_CERTIFIED, RCVD_IN_VALIDITY_RPBL,RCVD_IN_VALIDITY_SAFE,SPF_HELO_PASS, URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id E9EFC27BC49 for ; Tue, 20 May 2025 23:27:00 +0100 (BST) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1uHVPn-00072F-04; Tue, 20 May 2025 18:26:27 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1uHVPk-0006zO-5F for guix-patches@gnu.org; Tue, 20 May 2025 18:26:24 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1uHVPj-00052m-Qb for guix-patches@gnu.org; Tue, 20 May 2025 18:26:23 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debbugs.gnu.org; s=debbugs-gnu-org; h=MIME-Version:References:In-Reply-To:Date:From:To:Subject; bh=w95NTQeczzi1pzfjUK/tCJUPCHHJpdFaKDRz1P5Tc0E=; b=rESqJ0jkYaiDVtujU7JgECFtpeR4piZ77fPtxFrtNdG3Wt0qonJSIG7yC2yhBZCR5X5sfcPtXNg7jy49YYm+9q7EAbZHFLUjvj+fjSin179x+/bZ1AJT6UVgi/tSqLVXKn+B5u2bWkCdCB9R3amVg0JW0UBHsTYJ/J0W+wYh8y6FAJMZRqdYIrvmcOzOMHi+zzh65AReSeVGE6TnHetkMDTQjd6s4az0f/wxW/Etdtq7MltRC7vibGfVuwhp/QSIHlyd9FWVU4YGu0M/3ZK3cz/AsuL6+jrdF7ipXIi/jEwBF4G39qilSW4mcem2wb+nMcIy1yuiEKmncWlYZu55jw==; Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1uHVPe-0004Wz-K4; Tue, 20 May 2025 18:26:18 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#78517] [PATCH 13/31] gnu: Add python-colossus. Resent-From: Sharlatan Hellseher Original-Sender: "Debbugs-submit" Resent-CC: andreas@enge.fr, bavier@posteo.net, sharlatanus@gmail.com, guix-patches@gnu.org Resent-Date: Tue, 20 May 2025 22:26:18 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 78517 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 78517@debbugs.gnu.org Cc: Sharlatan Hellseher , Andreas Enge , Eric Bavier , Sharlatan Hellseher X-Debbugs-Original-Xcc: Andreas Enge , Eric Bavier , Sharlatan Hellseher Received: via spool by 78517-submit@debbugs.gnu.org id=B78517.174777993216971 (code B ref 78517); Tue, 20 May 2025 22:26:18 +0000 Received: (at 78517) by debbugs.gnu.org; 20 May 2025 22:25:32 +0000 Received: from localhost ([127.0.0.1]:38079 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1uHVOs-0004PM-V8 for submit@debbugs.gnu.org; Tue, 20 May 2025 18:25:32 -0400 Received: from mail-wr1-x436.google.com ([2a00:1450:4864:20::436]:60537) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.84_2) (envelope-from ) id 1uHVOi-0004M0-4x for 78517@debbugs.gnu.org; Tue, 20 May 2025 18:25:20 -0400 Received: by mail-wr1-x436.google.com with SMTP id ffacd0b85a97d-3a375d758a0so1770141f8f.0 for <78517@debbugs.gnu.org>; Tue, 20 May 2025 15:25:20 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20230601; t=1747779914; x=1748384714; darn=debbugs.gnu.org; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=w95NTQeczzi1pzfjUK/tCJUPCHHJpdFaKDRz1P5Tc0E=; b=eLgelXHA9K3SCvIyfoar+6X4Q3bD5uge9AcREa8a7IlQbFhjDjSc8n0W4opkCFSADo AUgUrzQjJxZRWLxeOFRjH2C4bkXIqWqxDW2DXOGywclbnkfnsePyMXPYgCalZBLFQdow psQrz1BnFGOPyAAHHmM6WWAN3XkvChUMFk6K0aZ/mjDuzMgM6bxZCtiSHfKz4WtjGINM dYceKbRf9WGZkg3+r5wvz34eA7F6zxEO7je6WdVra47jTWg8x5u0qRiE/P5+p9un0jH6 8r280jS4DdZJyOXmj0nyEejeqENZwpElxX3rgkEhRa5CcTJ19tu2kxsCwJG4DjtqunOl owig== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20230601; t=1747779914; x=1748384714; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=w95NTQeczzi1pzfjUK/tCJUPCHHJpdFaKDRz1P5Tc0E=; b=uvYZgsNjoUde6ZmyNt2Otztl7ZW80TOya1oV8NBdlm3Eo0UpoRTgmuaHZinLQqQARp cRY00pXMmUL46ALryQZGAZJzOOkd2cdHDrLwVDh07HvyUl1xvCtgMWJUCT7CP3N4Jsnx vZc2HAGMUENazJNxoEPhXjHeywMdwwhALNGtZ5VMbrCElv2hiL0KDKC2WJJHCQTLDk75 WEvOLzdWk/GYJKn1mfMfwRCuV3agY2P24E/HYqLVZDLEQujmz5KyQfBPLocy0rApPLMZ zp571qFkRIjDjuprlboKZctXKz9i1FnzKdG0HeUsaudAhBPgMuSqp7yESi+UsjzoMF40 zKuw== X-Gm-Message-State: AOJu0YwTEYxWbpc8vuTzB+edZK15SSfHZScwUZ/nQCmhozbJGLtXiGFr 9C6Xy7tdSKkakvtEkwrLJQpxatfPQFs+Y1j8W9GqL6fRl7XSP85ESaE4AEBpxg== X-Gm-Gg: ASbGncuRt/Q0p8Xf41S2l/JmaObOv2lioygOYqZpmjwTDvP+BvTFTZVGCAPmR0TURxc TWESGf0+4WvCqHoP7Vg8DVxZdASq4cnDDMFTJ7YfXCeJR92bRDDw5QqGKRWS1iDKaEkuZyaiAGi 9kwg4hPWJp7CV9Ll/1S2bmgYOgAxN4W5ynJK5eNKUXZ2p8CJHHjJirKxjptoOV05DzTsSTgSirU yTE8bovv1vjjnV1jiFI1lxN9FkJrcJ5E/nGYWQEFS4DiFtEzxPgrKLhIBgdoOdFI/GmTAHLlF4q xjn0ttKNrXKaNx0wi1XS7z+smkALKR/EEH8KPEhXrUBpCUMHTuwKYYWI7g52WDZQqGmJL9B2VG1 N1iz2Mq/9ANnv44h39+ev/JHn2Tbsld3VMFczdQVpIgGIL8o= X-Google-Smtp-Source: AGHT+IGS37GOaLYM66lP4mIDYAQBZLayJ71y9SyB7EeTM0fSJ/6itUkbrZZVx64kPNHCt/b1q4ZStQ== X-Received: by 2002:a05:6000:2585:b0:3a3:7d7a:4e9 with SMTP id ffacd0b85a97d-3a37d7a054cmr1744004f8f.28.1747779913860; Tue, 20 May 2025 15:25:13 -0700 (PDT) Received: from localhost.localdomain (cpc100684-bagu15-2-0-cust967.1-3.cable.virginm.net. [86.8.111.200]) by smtp.gmail.com with ESMTPSA id ffacd0b85a97d-3a3620dbc6asm16438730f8f.88.2025.05.20.15.25.13 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Tue, 20 May 2025 15:25:13 -0700 (PDT) From: Sharlatan Hellseher Date: Tue, 20 May 2025 23:24:35 +0100 Message-ID: <3620aea8381c78832641d335dd1bd26a55eebc55.1747779548.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.49.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-colossus): New variable. Change-Id: Ie1c57bad1f4d5bc09d854a665e5538e19d5d529b --- gnu/packages/astronomy.scm | 42 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 42 insertions(+) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 73f2b65531..30b159941f 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -2849,6 +2849,48 @@ (define-public python-cmyt @code{red}, and others (@code{algae}, @code{pastel}, and @code{xray}).") (license license:bsd-3))) +(define-public python-colossus + ;; There is no source distribution in PyPI and no version tags, use the + ;; commit pointing to the version 1.3.8. + (let ((commit "0lz4n4i4frgsdspmka4pk6q4zq6j1z37g5xx7pr3xzgl9qfiiad2") + (revision "0")) + (package + (name "python-colossus") + (version (git-version "1.3.8" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://bitbucket.org/bdiemer/colossus") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0mfkgfp6f0ay6kndh7vk8l0g2ijr32k55x3pmj15lp9kd8k3ln4r")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + ;; TODO: Skip test files requiring not packaged lenstronomy. + #~(list "--ignore=test/api/profiles/light_test.py" + "--ignore=test/api/profiles/mass_test.py"))) + (native-inputs + (list python-astropy-minimal + python-jsonpickle + python-pytest + python-scikit-image + python-setuptools + python-wheel)) + (propagated-inputs + (list python-numpy + python-scipy)) + (home-page "https://bitbucket.org/bdiemer/colossus") + (synopsis "Cosmology, halo, and large-scale structure tools") + (description + "@acronym{Colossus, COsmology haLO and large-Scale StrUcture toolS} is a +Python toolkit for calculations pertaining to cosmology, the large-scale +structure of the universe, and the properties of dark matter halos.") + (license license:expat)))) + (define-public python-coolest (package (name "python-coolest")