@@ -31108,6 +31108,30 @@ (define-public r-tolerance
Visualizations are also available for most of these settings.")
(license license:gpl2+)))
+(define-public r-topdom
+ (package
+ (name "r-topdom")
+ (version "0.10.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "TopDom" version))
+ (sha256
+ (base32 "1rryfnwvdlpdrjgs6sciy91cxfp4jykll0swclasydjvj4n642i6"))))
+ (properties `((upstream-name . "TopDom")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-ggplot2 r-matrixstats r-reshape2 r-tibble))
+ (home-page "https://github.com/HenrikBengtsson/TopDom")
+ (synopsis "Efficient method for Identifying genomic topological domains")
+ (description
+ "This method identifies topological domains in genomes from Hi-C sequence data.
+The authors published an implementation of their method as an R script. This package
+originates from those original @code{TopDom} R scripts and provides help pages adopted
+from the original @code{TopDom} PDF documentation. It also provides a small number of
+bug fixes to the original code.")
+ ;; Either version of the GPL
+ (license (list license:gpl2 license:gpl3))))
+
;; Keep this in sync with the liblantern package.
(define-public r-torch
(package