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[82.25.93.113]) by smtp.gmail.com with ESMTPSA id n22-20020a05600c4f9600b00411a6ce0f99sm16347385wmq.24.2024.02.20.15.44.04 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Tue, 20 Feb 2024 15:44:04 -0800 (PST) From: Sharlatan Hellseher Date: Tue, 20 Feb 2024 23:43:08 +0000 Message-ID: <22285c764730d55ebe16e60aebe5473c3ad803d3.1708471786.git.sharlatanus@gmail.com> X-Mailer: git-send-email 2.41.0 In-Reply-To: References: MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/astronomy.scm (python-astropy): Update to 6.0.0. [arguments] <#:phases>: (preparations) Adjust to be compatible with the new code layout. (check) Silent one more failing test. [propagated-inputs]: Add python-astropy-iers-data. [native-inputs]: Remove python-cython; add python-cython-3, python-matplotlib and python-pytest-mpl. Change-Id: Id48a7cf05c30c1a1f7799fdc162b910316743f7c --- gnu/packages/astronomy.scm | 28 ++++++++++++++-------------- 1 file changed, 14 insertions(+), 14 deletions(-) diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm index 45394a7070..11cdd9e862 100644 --- a/gnu/packages/astronomy.scm +++ b/gnu/packages/astronomy.scm @@ -1478,13 +1478,13 @@ (define-public celestia-gtk (define-public python-astropy (package (name "python-astropy") - (version "5.3.4") + (version "6.0.0") (source (origin (method url-fetch) (uri (pypi-uri "astropy" version)) (sha256 - (base32 "1n7iwvjari4xv37094cpiapmjhhm57b04hi4r40wqb5czbigg46l")) + (base32 "1nbpqx7ibm8zsyyy17y5rmfjamwz6mv0sy4drlisap9hald81k83")) (modules '((guix build utils))) (snippet '(begin @@ -1508,16 +1508,11 @@ (define-public python-astropy ;; Some tests require a writable home. (setenv "HOME" "/tmp") ;; Relax xfail tests. - (substitute* "setup.cfg" + (substitute* "pyproject.toml" (("xfail_strict = true") "xfail_strict = false")) - ;; Replace all references to external ply. - (let ((ply-files '("coordinates/angle_formats.py" - "utils/parsing.py"))) - (with-directory-excursion "astropy" - (map (lambda (file) - (substitute* file (("astropy.extern.ply") - "ply"))) - ply-files))) + ;; Replace reference to external ply. + (substitute* "astropy/utils/parsing.py" + (("astropy.extern.ply") "ply")) ;; Replace reference to external configobj. (with-directory-excursion "astropy/config" (substitute* "configuration.py" @@ -1541,22 +1536,26 @@ (define-public python-astropy " and not test_ignore_sigint" " and not test_parquet_filter" ;; See https://github.com/astropy/astropy/issues/15537 - " and not test_pvstar")))))))) + " and not test_pvstar" + ;; E ModuleNotFoundError: No module named 'wofz' + " and not test_pickle_functional")))))))) (native-inputs (list pkg-config python-colorlog python-coverage - python-cython + python-cython-3 python-extension-helpers python-h5py python-ipython python-jplephem + python-matplotlib python-objgraph python-pandas python-pyarrow python-pytest python-pytest-astropy python-pytest-astropy-header + python-pytest-mpl python-pytest-xdist python-scikit-image python-scipy @@ -1567,7 +1566,8 @@ (define-public python-astropy (inputs (list expat wcslib)) (propagated-inputs - (list python-configobj + (list python-astropy-iers-data + python-configobj python-numpy python-packaging python-ply