| Message ID | 20250406123732.31301-11-ngraves@ngraves.fr |
|---|---|
| State | New |
| Headers |
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Commit Message
Nicolas Graves
April 6, 2025, 12:37 p.m. UTC
* gnu/packages/bioinformatics.scm (cnvkit): Update to 0.9.12. [build-system]: Switch to pyproject. [native-inputs]: Add python-setuptools, python-wheel. --- gnu/packages/bioinformatics.scm | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5c5106b21a..cbb7aa1b11 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -21156,7 +21156,7 @@ (define-public nanopolish (define-public cnvkit (package (name "cnvkit") - (version "0.9.10") + (version "0.9.12") (source (origin (method git-fetch) @@ -21165,7 +21165,7 @@ (define-public cnvkit (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 - (base32 "0r303pqjg70zpxa564bavbfj99c6di0dafgqqwx2vh4vfsiif94q")))) + (base32 "090yh17symcahddx399kcx0mcw4gdrcc2jil3p8lb92r8c8kglb5")))) (build-system pyproject-build-system) (propagated-inputs (list python-biopython @@ -21182,7 +21182,7 @@ (define-public cnvkit ;; R packages r-dnacopy)) (inputs (list r-minimal)) ;for tests - (native-inputs (list python-setuptools python-wheel)) + (native-inputs (list python-pytest python-setuptools python-wheel)) (home-page "https://cnvkit.readthedocs.org/") (synopsis "Copy number variant detection from targeted DNA sequencing") (description