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Resent-From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Fri, 21 Apr 2023 08:18:02 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 62978 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: To: <62978@debbugs.gnu.org> Received: via spool by 62978-submit@debbugs.gnu.org id=B62978.16820650311230 (code B ref 62978); Fri, 21 Apr 2023 08:18:02 +0000 Received: (at 62978) by debbugs.gnu.org; 21 Apr 2023 08:17:11 +0000 Received: from localhost ([127.0.0.1]:39198 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pplx9-0000Jg-Cb for submit@debbugs.gnu.org; Fri, 21 Apr 2023 04:17:11 -0400 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:58113) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pplx3-0000IS-Ua for 62978@debbugs.gnu.org; Fri, 21 Apr 2023 04:17:08 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1682065019; x=1683879420; bh=NCUiKHryk2DNnOICLb35T6HjW/AbH4Wj8/F54A0cpXA=; b=hbKYOUYYU26l lLD8Kr7n8NudNEp8/R/3NedvY9JYnKwOsntsKgsfCd4D9zBMKCE2X1IruJCotNlu 1yZgWJzKPg5VleY+7AfpgtJ7FWDscR/O2XNnCtlnfLiHdu8R7XqAPrUyKZ01Bb7N nhY+qAPaHrunQ0iCOWFqGYxx+xMFtXk= Received-SPF: Pass (mailfrom) identity=mailfrom; client-ip=141.80.113.62; helo=sw-it-p-ex4.mdc-berlin.net; envelope-from=madalinionel.patrascu@mdc-berlin.de; receiver= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id 57640160123 for <62978@debbugs.gnu.org>; Fri, 21 Apr 2023 10:16:59 +0200 (CEST) Received: from Guix-Ubuntu18.04 (141.80.113.106) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.23; Fri, 21 Apr 2023 10:16:58 +0200 From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Date: Fri, 21 Apr 2023 10:16:39 +0200 Message-ID: <20230421081641.18388-4-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.39.2 In-Reply-To: <20230421081641.18388-1-madalinionel.patrascu@mdc-berlin.de> References: <20230421081641.18388-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 X-Originating-IP: [141.80.113.106] X-ClientProxiedBy: SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27578.006 X-TM-AS-Result: No-10--5.088400-5.000000 X-TMASE-MatchedRID: I6rpFm0lrcN6fjezFKxXHArcxrzwsv5uwTlc9CcHMZerwqxtE531VNnf JrUSEbFD5U2NzhfTq9zuNT8xdcEnQwE+dA3RWUSvnVTWWiNp+v/KIqAq0jIHisHBVqFYzBaDYxa 8wxTbhnt7MSP7SLpuGAoRYADvfikpuJXEeLLJ6+yrm7DrUlmNkIAy6p60ZV62yA7duzCw6dLdB/ CxWTRRu92KvEVWmYr1DDn84cLDHIcuw/s6ASVJxirhCkiRKlmAn6Aq7aJDNCBD3MczAU0odw== X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--5.088400-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27578.006 X-TM-SNTS-SMTP: 7773E230099C5F8C54A63A1CE8AAA777B40A5E3CF4F5386CF19DDCC8C60DE6DD2002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (bpp-seq-omics): New variable. --- gnu/packages/bioinformatics.scm | 22 ++++++++++++++++++++++ 1 file changed, 22 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index ad61b979dd..576af31ae6 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2321,6 +2321,28 @@ (define-public bpp-seq library provides sequence-related modules.") (license license:cecill-c))) +(define-public bpp-seq-omics + (package + (name "bpp-seq-omics") + (version "2.4.1") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/BioPP/bpp-seq-omics") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1sc2xdfnfp5a6qihplp49rgrqmj89898avfy9bqaq1g2fajppgjj")))) + (build-system cmake-build-system) + (inputs + (list bpp-core bpp-seq)) + (home-page "https://github.com/BioPP/bpp-seq-omics") + (synopsis "Bio++ sequence library genomics components") + (description + "This library contains the genomics components of the Bio++ sequence library. +It is part of the Bio++ project.") + (license license:cecill))) + (define-public bppsuite ;; The last release was in 2014 and the recommended way to install from source ;; is to clone the git repository, so we do this.