@@ -1702,6 +1702,37 @@ (define-public r-curatedtcgadata
across the entire multi-'omics experiment.")
(license license:artistic2.0)))
+(define-public r-oscope
+ (let ((commit "32e0ea72236128731f35a60fb5abcde5b5d35433")
+ (revision "1"))
+ (package
+ (name "r-oscope")
+ (version (git-version "1.29.0" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://git.bioconductor.org/packages/Oscope")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "02929i7zd4fwdhxi0h2i7y3sn6v1k3srahn5a6v9wvihp5nmgcig"))))
+ (properties `((upstream-name . "Oscope")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biocparallel r-cluster r-ebseq r-testthat))
+ (home-page "https://git.bioconductor.org/packages/Oscope")
+ (synopsis
+ "Oscillatory genes identifier in unsynchronized single cell RNA-seq")
+ (description
+ "Oscope is a oscillatory genes identifier in unsynchronized single cell RNA-seq.
+This statistical pipeline has been developed to identify and recover the
+base cycle profiles of oscillating genes in an unsynchronized single cell
+RNA-seq experiment. The Oscope pipeline includes three modules: a sine model
+module to search for candidate oscillator pairs; a K-medoids clustering module
+to cluster candidate oscillators into groups; and an extended nearest insertion
+module to recover the base cycle order for each oscillator group.")
+ (license license:asl2.0))))
+
(define-public r-parathyroidse
(package
(name "r-parathyroidse")