@@ -6811,6 +6811,46 @@ (define-public r-methylkit
TAB-Seq.")
(license license:artistic2.0)))
+(define-public r-mmuphin
+ (package
+ (name "r-mmuphin")
+ (version "1.12.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MMUPHin" version))
+ (sha256
+ (base32 "0vpap3avmrjy187s3dva6f008al6d935kpdf816xzl5gxl7zvf62"))))
+ (properties `((upstream-name . "MMUPHin")))
+ (build-system r-build-system)
+ (arguments
+ (list #:tests? #f)) ;; non deterministic, also it requieres http access
+ (inputs (list glpk))
+ (propagated-inputs
+ (list r-cowplot
+ r-biocstyle
+ r-dplyr
+ r-fpc
+ r-ggplot2
+ r-igraph
+ r-maaslin2
+ r-metafor
+ r-stringr
+ r-tidyr))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/MMUPHin")
+ (synopsis "Meta-analysis with uniform pipeline for heterogeneity in microbiome")
+ (description
+ "MMUPHin is an R package for meta-analysis tasks of microbiome cohorts. It
+has function interfaces for:
+@itemize
+@item covariate-controlled batch- and cohort effect adjustment;
+@item meta-analysis differential abundance testing;
+@item meta-analysis unsupervised discrete structure (clustering) discovery;
+@item meta-analysis unsupervised continuous structure discovery.
+@end itemize")
+ (license license:expat)))
+
(define-public r-motifrg
(package
(name "r-motifrg")