@@ -6644,6 +6644,39 @@ (define-public r-maser
and visualizaton of alternative splicing events generated by rMATS.")
(license license:expat)))
+(define-public r-metagenomeseq
+ (package
+ (name "r-metagenomeseq")
+ (version "1.40.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "metagenomeSeq" version))
+ (sha256
+ (base32 "01wjw4kcm8ysa5sn3cqg4a9i5pyksnwmbdqp5fr6n2l9hllkc9jy"))))
+ (properties `((upstream-name . "metagenomeSeq")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biobase
+ r-foreach
+ r-glmnet
+ r-gplots
+ r-limma
+ r-matrix
+ r-matrixstats
+ r-rcolorbrewer
+ r-wrench))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/HCBravoLab/metagenomeSeq")
+ (synopsis "Statistical analysis for sparse high-throughput sequencing")
+ (description
+ "MetagenomeSeq is designed to determine features (be it @acronym{OTU, Operational
+Taxanomic Unit}, species, etc.) that are differentially abundant between two or
+more groups of multiple samples. This package is designed to address the effects
+of both normalization and under-sampling of microbial communities on disease
+association detection and the testing of feature correlations.")
+ (license license:artistic2.0)))
+
(define-public r-metaneighbor
(package
(name "r-metaneighbor")