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Resent-From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Mon, 27 Feb 2023 10:30:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 61838 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <61838@debbugs.gnu.org> Cc: rekado@elephly.net X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by 61838-submit@debbugs.gnu.org id=B61838.16774937585578 (code B ref 61838); Mon, 27 Feb 2023 10:30:03 +0000 Received: (at 61838) by debbugs.gnu.org; 27 Feb 2023 10:29:18 +0000 Received: from localhost ([127.0.0.1]:46112 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pWakv-0001Ri-Jr for submit@debbugs.gnu.org; Mon, 27 Feb 2023 05:29:18 -0500 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:54725) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pWakp-0001QN-IV for 61838@debbugs.gnu.org; Mon, 27 Feb 2023 05:29:12 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1677493745; x=1679308146; bh=HkiwVsjsYJi9RZ/5sV78x3i3hBSGXsMoSuJO96A3bsg=; b=g00Zmrlqz/J4 5JEYnQsOfbslLaKtSyQZcDy3GEZbHhqy4z4OGPO+VxKRcmubvl8+jZ+24qEodHdg Ywd3vaiFaZlnK3vQBSIbqy/7V0aI8qeDrJ2f3P/8t/2PSfT+URzdZ8i/xid8NBeI zibWMYf9+L5R1MaaWBX0iMnLxGn60UM= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id 7A812160157 for <61838@debbugs.gnu.org>; Mon, 27 Feb 2023 11:29:05 +0100 (CET) Received: from Guix-Ubuntu18.04 (141.80.113.106) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.21; Mon, 27 Feb 2023 11:29:01 +0100 From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Date: Mon, 27 Feb 2023 11:28:42 +0100 Message-ID: <20230227102850.18782-5-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.39.1 In-Reply-To: <20230227102850.18782-1-madalinionel.patrascu@mdc-berlin.de> References: <20230227102850.18782-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 X-Originating-IP: [141.80.113.106] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27472.006 X-TM-AS-Result: No-10-2.199100-5.000000 X-TMASE-MatchedRID: SzbEz7SZt2v/R1NSMc2qCU7nLUqYrlslFIuBIWrdOeNTZ+DFCYZ6L6Pn cFCKybazRRa406V/YwyBUGewL2YXt8Z8zsjIitoJnVTWWiNp+v8XjfR3d0weRn8PhVj1fZ+6Ovj cPt7lSgOPyewSzonlQ/r8ztE1BNUXFA/vEqOUr49H4a2iJdV4MeOSS2dsOh9pU72YOAMDJjieAi CmPx4NwGmRqNBHmBvepuP9zg477pEqtq5d3cxkNRqXnrxrKCOXXz2rWAd+ccbEJzAmiQN5hGKAF gT6tgFAGm4GiR+m3eBPTK8cTqF7d61BZ2PJTcHYI6/uOY+4KjWR9NIHayOz1H/zrJEIGPrWDUEk BTZ8vOLxlyTCXQR4xioA5PA4dQuxuYpJR2kheXd+3BndfXUhXQ== X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10-2.199100-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27472.006 X-TM-SNTS-SMTP: 931BE625091C4C97D9E6CB0572611C733234BE8BB5FA8D77A49DEC5326BBFBF82002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/cran.scm (r-leidenalg): New variable. --- gnu/packages/cran.scm | 35 +++++++++++++++++++++++++++++++++++ 1 file changed, 35 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index da2b2521a7..3784faa752 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -23308,6 +23308,41 @@ (define-public r-leiden guaranteeing well-connected communities.\" .") (license license:gpl3))) +(define-public r-leidenalg + (package + (name "r-leidenalg") + (version "1.0.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "leidenAlg" version)) + (sha256 + (base32 "1z96zrsms93gspylmficaggb0xj94kq9rg3p2svdbb451jbga9an")))) + (properties `((upstream-name . "leidenAlg"))) + (build-system r-build-system) + (inputs + (list glpk + libxml2)) + (propagated-inputs + (list gmp + r-igraph + r-matrix + r-rcpp + r-rcpparmadillo + r-rcppeigen + r-sccore)) + (native-inputs (list gfortran)) + (home-page "https://github.com/kharchenkolab/leidenAlg") + (synopsis "Leiden algorithm via an R interface") + (description + "This package implements an R interface to the Leiden algorithm, an iterative +community detection algorithm on networks. The algorithm is designed to converge +to a partition in which all subsets of all communities are locally optimally assigned, +yielding communities guaranteed to be connected. The implementation proves to be +fast, scales well, and can be run on graphs of millions of nodes (as long as they can +fit in memory).") + (license license:gpl3))) + (define-public r-patchwork (package (name "r-patchwork")