From patchwork Mon Feb 27 10:28:40 2023 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: =?utf-8?b?TcSDZMSDbGluIElvbmVsIFBhdHJhyJljdQ==?= X-Patchwork-Id: 47437 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id D43D416C26; Mon, 27 Feb 2023 10:31:48 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-1.8 required=5.0 tests=DKIM_INVALID,DKIM_SIGNED, MAILING_LIST_MULTI,RCVD_IN_MSPIKE_H2,SPF_HELO_PASS,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 2266016C1C for ; Mon, 27 Feb 2023 10:31:48 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1pWam2-0006jz-ID; Mon, 27 Feb 2023 05:30:26 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1pWalg-0006es-Bx for guix-patches@gnu.org; Mon, 27 Feb 2023 05:30:09 -0500 Received: from debbugs.gnu.org ([209.51.188.43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1pWalf-0008H5-VF for guix-patches@gnu.org; Mon, 27 Feb 2023 05:30:04 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1pWalf-0001Up-9E; Mon, 27 Feb 2023 05:30:03 -0500 X-Loop: help-debbugs@gnu.org Subject: [bug#61838] [PATCH 03/13] gnu: Add r-n2r. Resent-From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Mon, 27 Feb 2023 10:30:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 61838 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <61838@debbugs.gnu.org> Cc: rekado@elephly.net X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by 61838-submit@debbugs.gnu.org id=B61838.16774937575566 (code B ref 61838); Mon, 27 Feb 2023 10:30:03 +0000 Received: (at 61838) by debbugs.gnu.org; 27 Feb 2023 10:29:17 +0000 Received: from localhost ([127.0.0.1]:46109 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pWakv-0001RV-4f for submit@debbugs.gnu.org; Mon, 27 Feb 2023 05:29:17 -0500 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:46741) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pWako-0001QM-RZ for 61838@debbugs.gnu.org; Mon, 27 Feb 2023 05:29:11 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1677493744; x=1679308145; bh=pdGZP7oIpkRbDj1ZMyK+XXpeyTl2az2d/wbekbg3miY=; b=ic5OA3vgS4zC 9SH3ojjliiaIDReuDB+LJpkfalS6Aps5sgnK1ckGp7g95gs4HQ48oMy9S2M9TgKv upk/r8QXdeCdwVwyJrxGPydf+HgbE066+EbN/e0JNw6qQ4P69OWo1VYMyFBkhwcf YZKXsEtRaXhgHqRTTGfflTWybsaAwV0= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id BFCC816014E for <61838@debbugs.gnu.org>; Mon, 27 Feb 2023 11:29:04 +0100 (CET) Received: from Guix-Ubuntu18.04 (141.80.113.106) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.21; Mon, 27 Feb 2023 11:29:01 +0100 From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Date: Mon, 27 Feb 2023 11:28:40 +0100 Message-ID: <20230227102850.18782-3-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.39.1 In-Reply-To: <20230227102850.18782-1-madalinionel.patrascu@mdc-berlin.de> References: <20230227102850.18782-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 X-Originating-IP: [141.80.113.106] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27472.006 X-TM-AS-Result: No-10-1.719400-5.000000 X-TMASE-MatchedRID: /+von0vPuFH/R1NSMc2qCU7nLUqYrlslFIuBIWrdOeOjEIt+uIPPOAbo TDS3zulAcjTcMkuJPYkZijt1cgK90C/33TWoSUH6L2JUO7sQ9/yCMN25048EeqY5ZGw7wyeHNZ6 ZIsdh38qjQfznAHGNCFaqBFpUBa9V0N7DjAdxZNTi8zVgXoAltuJ5hXsnxp7jC24oEZ6SpSk6XE E7Yhw4FomRy0XNgU9HzUNOfcVPXVriB9EDrRKq58NarKsMxzy0kgBpBbwEirVAZTWiSfgxfXNoU to89wycg5N+bsuxLfIWhuHBSve6ht8iatREjfpDE8nb9DwdQ4C2jbSab1pg0UjxFpwn53SOfhj5 CZkmSyI= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10-1.719400-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27472.006 X-TM-SNTS-SMTP: 167AF0EA3CB291F954EF2FC6F781DB61ED79F159C955C904D398BC7CEA9FC42B2002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/cran.scm (r-n2r): New variable. --- gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 46b8dbc9ec..184cbd6d7f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -8334,6 +8334,32 @@ (define-public r-tinytest ") (license license:gpl3))) +(define-public r-n2r + (package + (name "r-n2r") + (version "1.0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "N2R" version)) + (sha256 + (base32 "12bv7xx6j6222qgpv6g61i68017fz0x6fjg9a9k5yhgw3zk05hpk")))) + (properties `((upstream-name . "N2R"))) + (build-system r-build-system) + (propagated-inputs + (list r-matrix + r-rcpp + r-rcppeigen + r-rcppspdlog)) + (home-page "https://github.com/kharchenkolab/N2R") + (synopsis "Fast and scalable approximate k-Nearest Neighbor search methods") + (description + "This package implements methods to perform fast approximate K-nearest neighbor +search on input matrix. Algorithm based on the N2 implementation of an approximate +nearest neighbor search using hierarchical @acronym{NSW, Navigable Small World} +graphs.") + (license license:asl2.0))) + (define-public r-network (package (name "r-network")