From patchwork Mon Feb 20 18:53:51 2023 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Simon Tournier X-Patchwork-Id: 47156 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id E81BE16A9F; Mon, 20 Feb 2023 19:11:56 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-3.7 required=5.0 tests=BAYES_00,DKIM_ADSP_CUSTOM_MED, DKIM_INVALID,DKIM_SIGNED,FREEMAIL_FROM,MAILING_LIST_MULTI, RCVD_IN_MSPIKE_H2,SPF_HELO_PASS autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id 6825816A3C for ; Mon, 20 Feb 2023 19:11:56 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1pUBZ4-0007V6-H9; Mon, 20 Feb 2023 14:11:06 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1pUBZ2-0007Tb-S4 for guix-patches@gnu.org; Mon, 20 Feb 2023 14:11:04 -0500 Received: from debbugs.gnu.org ([209.51.188.43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1pUBZ2-0001ng-Jc for guix-patches@gnu.org; Mon, 20 Feb 2023 14:11:04 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1pUBZ2-0002uY-Ft for guix-patches@gnu.org; Mon, 20 Feb 2023 14:11:04 -0500 X-Loop: help-debbugs@gnu.org Subject: [bug#61656] [PATCH 04/24] gnu: r-deseq2: Update to 1.38.3. Resent-From: Simon Tournier Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 20 Feb 2023 19:11:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 61656 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 61656@debbugs.gnu.org Cc: Simon Tournier Received: via spool by 61656-submit@debbugs.gnu.org id=B61656.167692022010979 (code B ref 61656); Mon, 20 Feb 2023 19:11:04 +0000 Received: (at 61656) by debbugs.gnu.org; 20 Feb 2023 19:10:20 +0000 Received: from localhost ([127.0.0.1]:53612 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pUBYK-0002qv-HQ for submit@debbugs.gnu.org; Mon, 20 Feb 2023 14:10:20 -0500 Received: from mail-wr1-f52.google.com ([209.85.221.52]:45917) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pUBJM-0002P8-1S for 61656@debbugs.gnu.org; Mon, 20 Feb 2023 13:54:54 -0500 Received: by mail-wr1-f52.google.com with SMTP id p8so2335210wrt.12 for <61656@debbugs.gnu.org>; Mon, 20 Feb 2023 10:54:51 -0800 (PST) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20210112; t=1676919286; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:from:to:cc:subject:date :message-id:reply-to; bh=NSXcrve7x0GGGHIexS2CwPGRGNjZkHDMFvFczdJxbms=; b=lJow6hE7XAIwlQR8poOR+J4cqCL2oJVPj2TJinUeiiC5ex5mRhTrcwJHggyI7K31Mu 7hFrbgZIWJgUhU9eYt7ypm6TNoet35Zq1oOMZSkRc0I466biXDyR6PU01570zzomSKUH QXOAFPqxxEmA+D7HHVJbiWTijxwZKFIyRMZZYiW4Wv6TANwjrfPHlkMd9wwOomGv7ywO jvrERGPk+g/wWl1mUP7obIIp+F2NQIZsic5bRpN3H6dN3O6bomsbUwE3gAOdFarTDyTm P8TThrY8Ska0DTfTzBHgPJneUPz26fAUGT2X46puMYFEn/ZCRqe8VX/O91v0y1VgFpdd W8wg== X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20210112; t=1676919286; h=content-transfer-encoding:mime-version:references:in-reply-to :message-id:date:subject:cc:to:from:x-gm-message-state:from:to:cc :subject:date:message-id:reply-to; bh=NSXcrve7x0GGGHIexS2CwPGRGNjZkHDMFvFczdJxbms=; b=wTx3wG7qCEGUDH4Ak8NDTBrNLN8T+XuJABvoZx5cU+2QSHgadaS7hnHiZJj0o+Dmri jxwlMgJlMswE8gC/yPRZr+QqudaCUIqXkJ9T7MF+tCfH1Tm0JQVoEqYXXfHLSpzNs6js VFcUXsB7L3QwRz9wVC4OaxLgl4M5tJmv9shh6zZ6iI+Wi4yYZn/NPWavNdonjI9oxx8O ZQCwXKeMTu6REjC5179hfU25lMR+Z+g8Q1lMLzhUuv0EnV2j2wVRyeLeGgq8dWSXVjbh daKLXOrX2/+1YiCpppTrgJi9nNJENEP9HCq8yJl3EtGh0UCDsXToyXSmwNJAoCt6EEO+ vuTA== X-Gm-Message-State: AO0yUKX0IW5zT/z9u5Rm7btCqEnab4UQPeZWerOVqdACJdCmvtgYEdK1 YBmP3L5sMnSITWkZEc04cBxkSXOq0vA= X-Google-Smtp-Source: AK7set/EvoW28zKsdfASGBk+jXT+n/mpSFK8L3kJF4ozTTzriQOK5lfC7deZ1JiRMmBGYooTpWGEqw== X-Received: by 2002:adf:fd03:0:b0:2c5:8b8d:e5df with SMTP id e3-20020adffd03000000b002c58b8de5dfmr1554152wrr.1.1676919286320; Mon, 20 Feb 2023 10:54:46 -0800 (PST) Received: from localhost.localdomain ([193.48.40.241]) by smtp.gmail.com with ESMTPSA id j8-20020a5d6048000000b002c553e061fdsm4824227wrt.112.2023.02.20.10.54.45 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 20 Feb 2023 10:54:46 -0800 (PST) From: Simon Tournier Date: Mon, 20 Feb 2023 19:53:51 +0100 Message-Id: <20230220185411.377212-4-zimon.toutoune@gmail.com> X-Mailer: git-send-email 2.38.1 In-Reply-To: <20230220185411.377212-1-zimon.toutoune@gmail.com> References: <20230220185411.377212-1-zimon.toutoune@gmail.com> MIME-Version: 1.0 X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioconductor.scm (r-deseq2): Update to 1.38.3. --- gnu/packages/bioconductor.scm | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 3828b7ba4c..e2b8e689b8 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5655,14 +5655,14 @@ (define-public r-deseq (define-public r-deseq2 (package (name "r-deseq2") - (version "1.38.2") + (version "1.38.3") (source (origin (method url-fetch) (uri (bioconductor-uri "DESeq2" version)) (sha256 (base32 - "1m81yvcl63h5m7kbbxpjk7hzygxmn4l9mlgqrdmnnls56183h3b4")))) + "0kryg9jb6zl4zj1wx09rmljqlhr5vdbcmdnri4q91jpggsaj9nxm")))) (properties `((upstream-name . "DESeq2"))) (build-system r-build-system) (propagated-inputs