| Message ID | 20230209081235.30512-2-navid.afkhami@mdc-berlin.de |
|---|---|
| State | New |
| Headers | show
Return-Path: <guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org> X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 3CC97164D1; Thu, 9 Feb 2023 08:13:30 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-3.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,RCVD_IN_MSPIKE_H2,SPF_HELO_PASS, URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id C2232164D0 for <patchwork@mira.cbaines.net>; Thu, 9 Feb 2023 08:13:29 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from <guix-patches-bounces@gnu.org>) id 1pQ23K-0006Zp-Vm; Thu, 09 Feb 2023 03:13:11 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <Debian-debbugs@debbugs.gnu.org>) id 1pQ23I-0006ZS-KQ for guix-patches@gnu.org; Thu, 09 Feb 2023 03:13:08 -0500 Received: from debbugs.gnu.org ([209.51.188.43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from <Debian-debbugs@debbugs.gnu.org>) id 1pQ23D-00014e-If for guix-patches@gnu.org; Thu, 09 Feb 2023 03:13:08 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from <Debian-debbugs@debbugs.gnu.org>) id 1pQ23D-0007js-F0 for guix-patches@gnu.org; Thu, 09 Feb 2023 03:13:03 -0500 X-Loop: help-debbugs@gnu.org Subject: [bug#61383] [PATCH 2/2] gnu: tetoolkit: Update to 2.2.1b. Resent-From: Navid Afkhami <navid.afkhami@mdc-berlin.de> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces@debbugs.gnu.org> Resent-CC: guix-patches@gnu.org Resent-Date: Thu, 09 Feb 2023 08:13:03 +0000 Resent-Message-ID: <handler.61383.B.167593037829721@debbugs.gnu.org> Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: report 61383 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: 61383@debbugs.gnu.org X-Debbugs-Original-To: <guix-patches@gnu.org> Received: via spool by submit@debbugs.gnu.org id=B.167593037829721 (code B ref -1); Thu, 09 Feb 2023 08:13:03 +0000 Received: (at submit) by debbugs.gnu.org; 9 Feb 2023 08:12:58 +0000 Received: from localhost ([127.0.0.1]:57356 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces@debbugs.gnu.org>) id 1pQ237-0007jI-Tt for submit@debbugs.gnu.org; Thu, 09 Feb 2023 03:12:58 -0500 Received: from lists.gnu.org ([209.51.188.17]:58854) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <Navid.Afkhami@mdc-berlin.de>) id 1pQ235-0007iw-0M for submit@debbugs.gnu.org; Thu, 09 Feb 2023 03:12:55 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <Navid.Afkhami@mdc-berlin.de>) id 1pQ231-0006Wf-TO for guix-patches@gnu.org; Thu, 09 Feb 2023 03:12:53 -0500 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <Navid.Afkhami@mdc-berlin.de>) id 1pQ22z-00012b-3W for guix-patches@gnu.org; Thu, 09 Feb 2023 03:12:51 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1675930367; x=1677744768; bh=GmXSG1aTNK3+2Tb7pwSHCF+QWlCsSR1vY7CQkqnARxo=; b=Xl0yn4bHlG4V Y+DVuJBFJn70swXagDxOMI+0JHCayE0kEDK/BjUi5Yv0jcy3ATszLY153b8TRiee EE+BTDmZDR1GoWS5uuAYAOibBWag811lf2VsJ3vzQ338aRRKqNhpsnFETlF22OqA rRu41XTEfWvrRitS0AyeTaA01IVxsjw= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id 1C3E9A00FD for <guix-patches@gnu.org>; Thu, 9 Feb 2023 09:12:47 +0100 (CET) Received: from localhost.localdomain (10.84.128.29) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.17; Thu, 9 Feb 2023 09:12:46 +0100 From: Navid Afkhami <navid.afkhami@mdc-berlin.de> Date: Thu, 9 Feb 2023 09:12:35 +0100 Message-ID: <20230209081235.30512-2-navid.afkhami@mdc-berlin.de> X-Mailer: git-send-email 2.34.1 In-Reply-To: <20230209081235.30512-1-navid.afkhami@mdc-berlin.de> References: <20230209081235.30512-1-navid.afkhami@mdc-berlin.de> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [10.84.128.29] X-ClientProxiedBy: SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27436.006 X-TM-AS-Result: No-10--0.085900-5.000000 X-TMASE-MatchedRID: MRc8tpsXpWsB90FcL1q4MBF4zyLyne+ATJDl9FKHbrn0alA+huUQ+fTr oULd1hBffS0Ip2eEHnwj/1Rbkzl1E95/HgWYxplM5MIx11wv+CPKayT/BQTiGu5+4KX96PVExps M8+gV/374pKPCziWV6x2UmJGH+fIP9ZUw0gMYKh0JmI4Y02DXLM74Vc/Ko3Y1jwZHPT0ySpl7LI ciw58gx2HkKCDQJqBctOdWe/Uk/vuwZO9kmaWWvP8+E8vSQCkfySOb56URxsg= X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--0.085900-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27436.006 X-TM-SNTS-SMTP: A549A5FAB6C7E59AF003F6768A0644559F649193626EFE578F1750E1FC7D07F52002:F Received-SPF: pass client-ip=194.95.232.172; envelope-from=Navid.Afkhami@mdc-berlin.de; helo=a2062.mx.srv.dfn.de X-Spam_score_int: -43 X-Spam_score: -4.4 X-Spam_bar: ---- X-Spam_report: (-4.4 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_DNSWL_MED=-2.3, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: <guix-patches.gnu.org> List-Unsubscribe: <https://lists.gnu.org/mailman/options/guix-patches>, <mailto:guix-patches-request@gnu.org?subject=unsubscribe> List-Archive: <https://lists.gnu.org/archive/html/guix-patches> List-Post: <mailto:guix-patches@gnu.org> List-Help: <mailto:guix-patches-request@gnu.org?subject=help> List-Subscribe: <https://lists.gnu.org/mailman/listinfo/guix-patches>, <mailto:guix-patches-request@gnu.org?subject=subscribe> Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches |
| Series |
[bug#61382,1/2] gnu: Add python-scrublet.
|
expand
|
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 05a078b0b0..3c9d5299bc 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2893,7 +2893,7 @@ (define-public tetoolkit (string-append "'" (search-input-file inputs "bin/sort") " ")) (("'rm -f ") (string-append "'" (search-input-file inputs "bin/rm") " -f ")) - (("'Rscript'") +` (("'Rscript'") (string-append "'" (search-input-file inputs "bin/Rscript") "'"))) (substitute* "TEToolkit/IO/ReadInputs.py"