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Resent-From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Thu, 02 Feb 2023 02:28:05 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 61220 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <61220@debbugs.gnu.org> Cc: rekado@elephly.net X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by 61220-submit@debbugs.gnu.org id=B61220.16753048489196 (code B ref 61220); Thu, 02 Feb 2023 02:28:05 +0000 Received: (at 61220) by debbugs.gnu.org; 2 Feb 2023 02:27:28 +0000 Received: from localhost ([127.0.0.1]:60222 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pNPJw-0002OA-DJ for submit@debbugs.gnu.org; Wed, 01 Feb 2023 21:27:28 -0500 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:40265) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pNPJu-0002MX-4K for 61220@debbugs.gnu.org; Wed, 01 Feb 2023 21:27:26 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1675304839; x=1677119240; bh=CoEhEJlpDBlvGSY6wk13bQenZUKt5+ys51S91Wu4KPM=; b=B0OhGEpsAtUv IwvJkqZfeiA86OHlKbo2UunLs/yebfhBzGAhn40ApP4Edjj1hRFrzDo0sljIgaOs 9/jmoVYomkgO+sZxefXXNEcuI0FV2bq9XVCqdwhHZPzdkaN0wdG2P5XQIxKcJQlc 5otCucDSEBn1e+hgpKhNwe1Z8ZEv6mQ= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id 8A4891606E0 for <61220@debbugs.gnu.org>; Thu, 2 Feb 2023 03:27:19 +0100 (CET) Received: from pimi-TRX40-AORUS-PRO-WIFI.lan (77.23.232.54) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.17; Thu, 2 Feb 2023 03:27:12 +0100 From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Date: Thu, 2 Feb 2023 03:26:52 +0100 Message-ID: <20230202022657.67003-5-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.39.1 In-Reply-To: <20230202022657.67003-1-madalinionel.patrascu@mdc-berlin.de> References: <20230202022657.67003-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 X-Originating-IP: [77.23.232.54] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27422.004 X-TM-AS-Result: No-10--0.760400-5.000000 X-TMASE-MatchedRID: 4RK2gbhxGJM63WD5CqqQDQrcxrzwsv5uwTlc9CcHMZerwqxtE531VNnf JrUSEbFDzLIHIzVyU2TuNT8xdcEnQwE+dA3RWUSvj5hLPCX3ZdOFzNNPDc6umGmj1qXcLu1ioYv KPGlaNfEevfN9eU+/vv/jG5sJvhKorWL/xQJnm46rm7DrUlmNkIAy6p60ZV62yA7duzCw6dIBpR CTkRk5SfoLR4+zsDTttrrTuahHzlEb7puurRRG3vsgw1fkyPWGZx+kpNAcjee7ikXW21lbVUatS rNDTdH9n7KEHck0ql49QG1QW3rZ8oBm3HaqfqLuQnwkUtP3AEh0CfPGRz/A475iX+rqLWae/WY7 WJgskOpPhxsEgoy4er7rweoAIK8o X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--0.760400-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27422.004 X-TM-SNTS-SMTP: CD697A1DAFC78CC293006402E33A9F9A8D3FD225C1BA8CFBC79AC6E04C0B0B782002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioconductor.scm (r-manor): New variable. --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1efafb1cd3..3339c751cb 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6518,6 +6518,29 @@ (define-public r-makecdfenv package that automatically loads that environment.") (license license:gpl2+))) +(define-public r-manor + (package + (name "r-manor") + (version "1.70.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "MANOR" version)) + (sha256 + (base32 "16b30bmyzml97cjdbh6h9ky5c4h5ws2a3g2xkxnd55sd3jg64jgx")))) + (properties `((upstream-name . "MANOR"))) + (build-system r-build-system) + (propagated-inputs (list r-glad)) + (native-inputs (list r-knitr)) + (home-page "http://bioinfo.curie.fr/projects/manor/index.html") ;;no https + (synopsis "CGH micro-array normalization") + (description + "This package ofers functions for importation, normalization, visualization, +and quality control to correct identified sources of variability in array of +@acronym{CGH, comparative genomic hybridization} experiments.") + (license license:gpl2))) + + (define-public r-maser (package (name "r-maser")