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Resent-From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Thu, 02 Feb 2023 02:28:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 61220 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <61220@debbugs.gnu.org> Cc: rekado@elephly.net X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by 61220-submit@debbugs.gnu.org id=B61220.16753048459134 (code B ref 61220); Thu, 02 Feb 2023 02:28:03 +0000 Received: (at 61220) by debbugs.gnu.org; 2 Feb 2023 02:27:25 +0000 Received: from localhost ([127.0.0.1]:60209 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pNPJs-0002NB-St for submit@debbugs.gnu.org; Wed, 01 Feb 2023 21:27:25 -0500 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:50093) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1pNPJo-0002M5-UM for 61220@debbugs.gnu.org; Wed, 01 Feb 2023 21:27:22 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1675304834; x=1677119235; bh=UFwuyBwENReeo4JvYw4PbSTIdfDqprO851k3rlEAT54=; b=AGyDdKlLa1ki 5c1K03SVCK98io+rW0NddaHJY0R8LTIoW93MeY5jLRb7SxbrWuvcety8OErkdWWy eBgojKU9BbNN/3npDEvlRgsfQtiSu/HMfFUD7p5TAjGF5w8otcOV8wxU8Nk/xskq iBtg499OU5EJ7d6idGCa6rzYYJz+Qn0= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id BC74F160630 for <61220@debbugs.gnu.org>; Thu, 2 Feb 2023 03:27:14 +0100 (CET) Received: from pimi-TRX40-AORUS-PRO-WIFI.lan (77.23.232.54) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.17; Thu, 2 Feb 2023 03:27:11 +0100 From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Date: Thu, 2 Feb 2023 03:26:50 +0100 Message-ID: <20230202022657.67003-3-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.39.1 In-Reply-To: <20230202022657.67003-1-madalinionel.patrascu@mdc-berlin.de> References: <20230202022657.67003-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 X-Originating-IP: [77.23.232.54] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27422.004 X-TM-AS-Result: No-10-1.393600-5.000000 X-TMASE-MatchedRID: 4RK2gbhxGJP/R1NSMc2qCU7nLUqYrlslFIuBIWrdOePfUZT83lbkELI5 /dPWFNfzRRa406V/YwyBUGewL2YXt8i5BCxh8k4DwLYk+NSxc5r4qCLIu0mtIOPsX9qV3ark7zu b46SCOG6hxWAM2J2vYBf6uqcdjTP5OpgF210IR5rdCok3ibXlQeuLFZZYlisfHxPMjOKY7A+u65 UDD0aDgsRB0bsfrpPI34T9cYMsdwx9pkL/lRJGPPi18QuPzYkqJjFTcuOKs5FLhJ+yfcG1b3mwO kVA6aqoz0sVw1+qnJNPDFfVge4SeawnrlCVeGXI+9ExW9vXP27cUke23u350xU7OJY7bdPeD9iv /sJMsVc7Oyi/ulxQeKUgZdIaXg4f X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10-1.393600-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27422.004 X-TM-SNTS-SMTP: 691B77956355292CCBEA6D9F79B585D56814624C66020BD1FD0D206F563E0C782002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioconductor.scm (r-pd-mapping50k-xba240): New variable. --- gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ed08807f07..fa8e60a4f4 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -115,6 +115,32 @@ (define-public r-org-bt-eg-db based on mapping using Entrez Gene identifiers.") (license license:artistic2.0))) +(define-public r-pd-mapping50k-xba240 + (package + (name "r-pd-mapping50k-xba240") + (version "3.12.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "pd.mapping50k.xba240" version + 'annotation)) + (sha256 + (base32 "1a1f3lh5ywhyjawdbj2fzban85c8jz70lfcv3pagd5piincjwxq8")))) + (properties `((upstream-name . "pd.mapping50k.xba240"))) + (build-system r-build-system) + (propagated-inputs + (list r-biostrings + r-dbi + r-iranges + r-oligo + r-oligoclasses + r-rsqlite + r-s4vectors)) + (home-page "https://bioconductor.org/packages/pd.mapping50k.xba240") + (synopsis "Platform design info for Affymetrix Mapping50K_Xba240") + (description "This package provides annotations for pd.mapping50k.xba240.") + (license license:artistic2.0))) + (define-public r-reactome-db (package (name "r-reactome-db")