From patchwork Mon Dec 12 14:27:02 2022 Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit X-Patchwork-Submitter: Ricardo Wurmus X-Patchwork-Id: 45205 Return-Path: X-Original-To: patchwork@mira.cbaines.net Delivered-To: patchwork@mira.cbaines.net Received: by mira.cbaines.net (Postfix, from userid 113) id 8160627BBEC; Mon, 12 Dec 2022 14:29:34 +0000 (GMT) X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on mira.cbaines.net X-Spam-Level: X-Spam-Status: No, score=-3.7 required=5.0 tests=BAYES_00,DKIM_INVALID, DKIM_SIGNED,MAILING_LIST_MULTI,RCVD_IN_MSPIKE_H2,SPF_HELO_PASS, URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) by mira.cbaines.net (Postfix) with ESMTPS id E842927BBE9 for ; Mon, 12 Dec 2022 14:29:33 +0000 (GMT) Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1p4jms-0005aF-Js; Mon, 12 Dec 2022 09:28:10 -0500 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1p4jmm-0005Ta-Ub for guix-patches@gnu.org; Mon, 12 Dec 2022 09:28:08 -0500 Received: from debbugs.gnu.org ([209.51.188.43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1p4jmm-0006Cv-Mr for guix-patches@gnu.org; Mon, 12 Dec 2022 09:28:04 -0500 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1p4jmm-0007Uv-GT for guix-patches@gnu.org; Mon, 12 Dec 2022 09:28:04 -0500 X-Loop: help-debbugs@gnu.org Subject: [bug#60009] [PATCH 04/18] gnu: python-hicmatrix: Update to 16. Resent-From: Ricardo Wurmus Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Mon, 12 Dec 2022 14:28:04 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 60009 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: To: 60009@debbugs.gnu.org Cc: Ricardo Wurmus Received: via spool by 60009-submit@debbugs.gnu.org id=B60009.167085525928687 (code B ref 60009); Mon, 12 Dec 2022 14:28:04 +0000 Received: (at 60009) by debbugs.gnu.org; 12 Dec 2022 14:27:39 +0000 Received: from localhost ([127.0.0.1]:53269 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1p4jmM-0007SY-Lj for submit@debbugs.gnu.org; Mon, 12 Dec 2022 09:27:39 -0500 Received: from sender3-of-o57.zoho.com ([136.143.184.57]:21738) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1p4jmL-0007SQ-2X for 60009@debbugs.gnu.org; Mon, 12 Dec 2022 09:27:37 -0500 ARC-Seal: i=1; a=rsa-sha256; t=1670855252; cv=none; d=zohomail.com; s=zohoarc; b=TuaBVn9rSqNqxEAZbMsUBAjZogZwNC+iPyZohrnfboObKUjwZ2dF1BVvvxzvsml6F8whQbTGwHG4CLMGizGFzrMMVwF8/fPb4ZrTP32sLE3eexbNJmOeF2fh3YvHKQhahsMhXGneUe8HM2JPvGG3esJ9D9JXSmtVHwQnOB2qW/M= ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=zohomail.com; s=zohoarc; t=1670855252; h=Content-Transfer-Encoding:Cc:Date:From:In-Reply-To:MIME-Version:Message-ID:References:Subject:To; bh=1dn3C8R6OkOEZfFlAb2Oxa/qSYd2KQ9iqlyPrlkCagg=; b=dVfmHeVezxWqCWjvxATsNKtcp37e6osdESjylcOZ4sNzHQe/WkTBeKpSe/tIoB+jKwPVS68S5TS2ryhxeehtP3PqdGzLKYGoxDqQraM3SmKdhZqaBdb9h/y0IFP6qIDWOHMpZmXxvLU2aimHzU1IyIMulPki6qT3t+U2YScAyb4= ARC-Authentication-Results: i=1; mx.zohomail.com; dkim=pass header.i=elephly.net; spf=pass smtp.mailfrom=rekado@elephly.net; dmarc=pass header.from= DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; t=1670855252; s=zoho; d=elephly.net; i=rekado@elephly.net; h=From:From:To:To:Cc:Cc:Subject:Subject:Date:Date:Message-Id:Message-Id:In-Reply-To:References:MIME-Version:Content-Transfer-Encoding:Reply-To; bh=1dn3C8R6OkOEZfFlAb2Oxa/qSYd2KQ9iqlyPrlkCagg=; b=ZUxlOMXMcm+6ViVHkjlRtLH6BH9KKrLpcB/MEARg9apn7aVTJ9+tWHRcxBvpR6u0 T/nvOtplbM+dfGcsxb5X7yxdKnU1cjoZnqfirl+8UdGugLqXoz5VoV/zVGR2sjTQ4E5 Fc2jaRFyIeSObj1OcK+muMcazklUwV+FRWVxrdDI= Received: from localhost (48-111-142-46.pool.kielnet.net [46.142.111.48]) by mx.zohomail.com with SMTPS id 1670855250194591.3845670182643; Mon, 12 Dec 2022 06:27:30 -0800 (PST) From: Ricardo Wurmus Date: Mon, 12 Dec 2022 15:27:02 +0100 Message-Id: <20221212142716.9460-4-rekado@elephly.net> X-Mailer: git-send-email 2.36.1 In-Reply-To: <20221212142716.9460-1-rekado@elephly.net> References: <87h6y03dkr.fsf@elephly.net> <20221212142716.9460-1-rekado@elephly.net> MIME-Version: 1.0 X-ZohoMailClient: External X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/bioinformatics.scm (python-hicmatrix): Update to 16. [build-system]: Use pyproject-build-system. [arguments]: Shuffle the quote. --- gnu/packages/bioinformatics.scm | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 52abe152ee..82801e7eeb 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13373,7 +13373,7 @@ (define-public python-cooltools (define-public python-hicmatrix (package (name "python-hicmatrix") - (version "15") + (version "16") (source (origin ;;Pypi sources do not contain any test @@ -13384,11 +13384,12 @@ (define-public python-hicmatrix (file-name (git-file-name name version)) (sha256 (base32 - "1dshjxgb16sdfg9k1bhw2yhyngac04k4ca7aqy8g3i3pprr068r5")))) - (build-system python-build-system) + "00b9l62j4knrsdp7l3pawi9cqcsl09diycbhmmnar850bzssmq4f")))) + (build-system pyproject-build-system) (arguments - `(#:phases - (modify-phases %standard-phases + (list + #:phases + '(modify-phases %standard-phases (replace 'check (lambda* (#:key tests? #:allow-other-keys) (when tests?