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Resent-From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Thu, 08 Dec 2022 19:23:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 59908 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <59908@debbugs.gnu.org> Cc: rekado@elephly.net X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by 59908-submit@debbugs.gnu.org id=B59908.167052737410241 (code B ref 59908); Thu, 08 Dec 2022 19:23:01 +0000 Received: (at 59908) by debbugs.gnu.org; 8 Dec 2022 19:22:54 +0000 Received: from localhost ([127.0.0.1]:58616 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1p3MTu-0002f7-HY for submit@debbugs.gnu.org; Thu, 08 Dec 2022 14:22:54 -0500 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]:41549) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1p3MTs-0002ec-M4 for 59908@debbugs.gnu.org; Thu, 08 Dec 2022 14:22:53 -0500 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1670527366; x=1672341767; bh=qmpHXo0g+rjkvIa8+F7pHWt6a6AKg5nh0EFsJekMcf4=; b=BziX84F52WAH 7fcdKrPQcQFIHC/O9YsIZLK3OGtIxrVINy7C3dFm5QJmz2JU44rzDcbquJZZRd6R sjOFtcSiLadIjJl0H2QaEIbIbCVHqselLi144B9rr5LtqcOshdngIesfb5MbXeql zuvJunHlNTtIVL9qFDthjfwQ5S0VvnI= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id 16713A05E0 for <59908@debbugs.gnu.org>; Thu, 8 Dec 2022 20:22:46 +0100 (CET) Received: from pimi-TRX40-AORUS-PRO-WIFI.lan (77.23.232.54) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.16; Thu, 8 Dec 2022 20:22:43 +0100 From: =?utf-8?b?TcSDZMSDbGlu?= Ionel =?utf-8?b?UGF0cmHImWN1?= Date: Thu, 8 Dec 2022 20:22:30 +0100 Message-ID: <20221208192232.16413-2-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.38.1 In-Reply-To: <20221208192232.16413-1-madalinionel.patrascu@mdc-berlin.de> References: <20221208192232.16413-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 X-Originating-IP: [77.23.232.54] X-ClientProxiedBy: SW-IT-P-EX1.mdc-berlin.net (141.80.113.54) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27312.002 X-TM-AS-Result: No-10-0.670400-5.000000 X-TMASE-MatchedRID: I6rpFm0lrcP/R1NSMc2qCU7nLUqYrlslFIuBIWrdOeOU8ftiyKjZrXlb NLJMhGktPRxYd0S1w+nuNT8xdcEnQwE+dA3RWUSvwLYk+NSxc5r4qCLIu0mtIKY5ZGw7wyeHrUJ gwjLBXrUhKx5yh0VgdLxgN+GS/lVkUUvcVJ+45/Y7lKkz03w06+uLFZZYlisfHxPMjOKY7A8Lbi gRnpKlKTpcQTtiHDgWJyQ9UY6B1gvyLSTiEVXEg9mGhmJicaDiuJOjEQbYZ1DYzHk2G3EtCcGWK 5LzIChT9PEBiceybbVv+t8Ad/sDrPntiEfIOtHZ3yJq1ESN+kMTydv0PB1DgLaNtJpvWmDRSPEW nCfndI5+GPkJmSZLIg== X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10-0.670400-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27312.002 X-TM-SNTS-SMTP: 866BAF5B38ECED7B430F6BAA62E7263D2405BEB20FB319F734F34E99BBD532B32002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org Sender: guix-patches-bounces+patchwork=mira.cbaines.net@gnu.org X-getmail-retrieved-from-mailbox: Patches * gnu/packages/cran.scm (r-ptw): New variable. --- gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 016eeb4821..4561d50e02 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -4858,6 +4858,32 @@ (define-public r-powerlaw ;; Any of these GPL versions. (license (list license:gpl2 license:gpl3)))) +(define-public r-ptw + (package + (name "r-ptw") + (version "1.9-16") + (source (origin + (method url-fetch) + (uri (cran-uri "ptw" version)) + (sha256 + (base32 + "0rma3h9ksc5qigdvk5vappb4ipd4rpk64wckzcxvxspakr5w71vy")))) + (properties `((upstream-name . "ptw"))) + (build-system r-build-system) + (propagated-inputs (list r-rcppde)) + (home-page "https://github.com/rwehrens/ptw") + (synopsis "Parametric time warping") + (description + "Parametric time warping aligns patterns. It aims to put corresponding +features at the same locations. The algorithm searches for an optimal polynomial +describing the warping. It is possible to align one sample to a reference, several +samples to the same reference, or several samples to several references. One can +choose between calculating individual warpings, or one global warping for a set +of samples and one reference. Two optimization criteria are implemented: @acronym{ +RMS, Root Mean Square} error and @acronym{WCC, Weighted Cross Correlation}. Both +warping of peak profiles and of peak lists are supported.") + (license license:gpl2+))) + (define-public r-compare (package (name "r-compare")